Author [ Title(Asc)] Type Year
A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 
Bopardikar I, Sutaria D, Sule M, Patankar V, Klinck H.  2018.  Description and classification of Indian Ocean humpback dolphin (Sousa plumbea) whistles recorded off the Sindhudurg coast of Maharashtra, India . Marine Mammel Science. 34(3):755-776.
Najar AH, Sneha KM, Ashok A, Babu S, Subramaniam AG, Kannan R, Viswanath B, Purushottam M, Varghese M, Parvez S et al..  2018.  Derivation of iPSC lines from two patients with familial Alzheimer's disease from India.. Stem Cell Res. 34:101370.
Bhalla US.  2019.  Dendrites, Deep Learning, and Sequences in the Hippocampus.. Hippocampus. 29(3):239-251.
Harihar A, Pandav B, Ghosh-Harihar M, Goodrich J.  2020.  Demographic and ecological correlates of a recovering tiger (Panthera tigris) population: Lessons learnt from 13-years of monitoring. BIOLOGICAL CONSERVATION. (108848)
Amarasinghe AAThasun, Ganesh S.R., Mirza ZA, Campbell PD, Pauwels OSG, Schweiger S, Kupfer A, Patel H, Karunarathna S, Deuti K et al..  2022.  The delusion of stripes: A century-old mystery of five-lined sun skinks (Reptilia: Scincidae: Eutropis) of Peninsular India elucidated. Zoologischer Anzeiger. 296:71-90.
Yasmin F, Saxena K, McEwen BS, Chattarji S.  2016.  The delayed strengthening of synaptic connectivity in the amygdala depends on NMDA receptor activation during acute stress.. Physiol Rep. 4(20)
Swetha C, Narjala A, Pandit A, Tirumalai V, Shivaprasad PV.  2022.  Degradome comparison between wild and cultivated rice identifies differential targeting by miRNAs.. BMC Genomics. 23(1):53.
Dhanya SKumari, Hasan G.  2021.  Deficits Associated With Loss of STIM1 in Purkinje Neurons Including Motor Coordination Can Be Rescued by Loss of Septin 7.. Front Cell Dev Biol. 9:794807.
Eriksen RSkytte, Krishna S.  2020.  Defence versus growth in a hostile world: lessons from phage and bacteria.. R Soc Open Sci. 7(9):201118.
Wigley BJ, Fritz H, Coetsee C.  2018.  Defence strategies in African savanna trees.. Oecologia.
Singh M, Roychowdhury A, Gupta A.  2022.  Defects and metric anomalies in Foppl-von Karman surfaces. PROCEEDINGS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES. 478(2262):20210829.
Robin VV, Vishnudas CK, Gupta P, Ramakrishnan U.  2015.  Deep and wide valleys drive nested phylogeographic patterns across a montane bird community.. Proc Biol Sci. 282(1810)
Ahmed A, Mam B, Sowdhamini R.  2021.  DEELIG: A Deep Learning Approach to Predict Protein-Ligand Binding Affinity.. Bioinform Biol Insights. 15:11779322211030364.
Arolkar G, Kumar SKrishna, Wang H, Gonzalez KM, Kumar S, Bishnoi B, Coronado PERios, Y Woo J, Red-Horse K, Das S.  2023.  Dedifferentiation and Proliferation of Artery Endothelial Cells Drive Coronary Collateral Development in Mice.. Arterioscler Thromb Vasc Biol.
Anilkumar S, Patel D, de Boer SF, Chattarji S, Buwalda B.  2021.  Decreased dendritic spine density in posterodorsal medial amygdala neurons of proactive coping rats.. Behav Brain Res. 397:112940.
Singh J, Raina R, Vinothkumar KR, Anand R.  2022.  Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.. ACS Chem Biol.
Singh G, Kumar S, Das R.  2023.  Decoding the Assembly of Mixed and Branched Heterotypic Ubiquitin Chains.. Anal Chem. 95(26):10061-10067.
Shameer K, Naika MBN, K Shafi M, Sowdhamini R.  2019.  Decoding systems biology of plant stress for sustainable agriculture development and optimized food production.. Prog Biophys Mol Biol. 145:19-39.
Mohanty P, Agrata R, Habibullah BIsmail, S AG, Das R.  2019.  Deamidation disrupts native and transient contacts to weaken the interaction between UBC13 and RING-finger E3 ligases.. Elife. 8
Rajagopal D, Sopory SK, Mathew M.K.  2022.  Dealing with Environmental Fluctuations: Diversity of Potassium Uptake Systems Across the Three Domains of Life. JOURNAL OF PLANT GROWTH REGULATION .
Sarkar SR, Dubey VKumar, Jahagirdar A, Lakshmanan V, Haroon MMohamed, Sowndarya S, Sowdhamini R, Palakodeti D.  2022.  DDX24 is required for muscle fiber organization and the suppression of wound-induced Wnt activity necessary for pole re-establishment during planarian regeneration.. Dev Biol.
K Shafi M, Joshi AG, Meenakshi I, Pasha SNaseer, Harini K, Mahita J, Sajeevan RSivarajan, Karpe SD, Ghosh P, Nitish S et al..  2020.  Dataset for the combined transcriptome assembly of and functional annotation.. Data Brief. 30:105416.
Hudson LN, Newbold T, Contu S, Hill SLL, Kumar A.  2017.  The database of the PREDICTS (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems) project. Ecology and Evolution. 7(1):145-188.
Caicedo JC, Cooper S, Heigwer F, Warchal S, Qiu P, Molnar C, Vasilevich AS, Barry JD, Bansal HSingh, Kraus O et al..  2017.  Data-analysis strategies for image-based cell profiling.. Nat Methods. 14(9):849-863.
Ravooru N, Paul OSarah, Nagendra HGundurao, Sathyanarayanan N.  2019.  Data enabled prediction analysis assigns folate/biopterin transporter (BT1) family to 36 hypothetical membrane proteins in Leishmania donovani.. Bioinformation. 15(10):697-708.
Ameta S, Arsène S, Foulon S, Saudemont B, Clifton BE, Griffiths AD, Nghe P.  2021.  Darwinian properties and their trade-offs in autocatalytic RNA reaction networks.. Nat Commun. 12(1):842.
Dua N, Seshadri A, Badrinarayanan A.  2022.  DarT-mediated mtDNA damage induces dynamic reorganization and selective segregation of mitochondria.. J Cell Biol. 221(10)
Tanalgo KC, Tabora JAries G, de Oliveira HFernandes, Haelewaters D, Beranek CT, Otálora-Ardila A, Bernard E, Gonçalves F, Eriksson A, Donnelly M et al..  2022.  DarkCideS 1.0, a global database for bats in karsts and caves.. Sci Data. 9(1):155.
Kumar M, Sharma S, Sil P, Kushwaha M, Mayor S, Vishwakarma RA, Singh PP.  2019.  C–H Arylation of N‐Heteroarenes under Metal‐Free Conditions and its Application towards the Synthesis of Pentabromo‐ and Pentachloropseudilins. EUROPEAN JOURNAL OF ORGANIC CHEMISTRY. 2019(22):3591-3598.
Ramdas NM, Shivashankar GV.  2015.  Cytoskeletal control of nuclear morphology and chromatin organization.. J Mol Biol. 427(3):695-706.
Bansal D, Kulkarni J, Nadahalli K, Lakshmanan V, Krishna S, Sasidharan V, Geo J, Dilipkumar S, Pasricha R, Gulyani A et al..  2017.  Cytoplasmic poly (A) binding protein (PABPC2) critically regulates epidermal maintenance and turnover in planarian Schmidtea mediterranea.. Development.
Vijayasarathy M, Kumar S, Das R, Balaram P.  2023.  Cysteine-free cone snail venom peptides: Classification of precursor proteins and identification of mature peptides.. J Pept Sci. :e3554.
Das M, Sreedharan S, Shee S, Malhotra N, Nandy M, Banerjee U, Kohli S, Rajmani RS, Chandra N, Seshasayee ASai Narain et al..  2023.  Cysteine desulfurase (IscS)-mediated fine-tuning of bioenergetics and SUF expression prevents hypervirulence.. Sci Adv. 9(50):eadh2858.
Konieczny P, Mukherjee S, Stepniak-Konieczna E, Taylor K, Niewiadomska D, Piasecka A, Walczak A, Baud A, Dohno C, Nakatani K et al..  2021.  Cyclic mismatch binding ligands interact with disease-associated CGG trinucleotide repeats in RNA and suppress their translation.. Nucleic Acids Res.
Sahasrabuddhe V, Ghosh HS.  2022.  Cx3Cr1-Cre induction leads to microglial activation and IFN-1 signaling caused by DNA damage in early postnatal brain.. Cell Rep. 38(3):110252.
Narah J, Streinzer M, Chakravorty J, Megu K, Spaethe J, Brockmann A, Schmitt T.  2024.  Cuticular Hydrocarbon Profiles of Himalayan Bumble Bees (Hymenoptera: Bombus Latreille) are Species-Specific and Show Elevational Variation.. J Chem Ecol.
S Rautu A.  2018.  Curvature instability of membranes near rigid inclusions.. Phys Rev E. 97(2-1):022414.
Lajmi A, Datta-Roy A, Vyas R, Agarwal I, Karanth P.  2018.  The curious case of Hemidactylus gujaratensis (Squamata: Gekkonidae).. Zootaxa. 4388(1):137-142.
Tirumalai V, Narjala A, Swetha C, G Sundar VHari, Sujith TN, Shivaprasad PV.  2022.  Cultivar-specific miRNA-mediated RNA silencing in grapes.. Planta. 256(1):17.
Jalal ASB, Tran NT, Stevenson CEM, Chimthanawala A, Badrinarayanan A, Lawson DM, Le TBK.  2021.  A CTP-dependent gating mechanism enables ParB spreading on DNA. Elife. 10(e69676)
Huelsmeier J, Walker E, Bakthavachalu B, Ramaswami M.  2021.  A C-terminal ataxin-2 disordered region promotes Huntingtin protein aggregation and neurodegeneration in Drosophila models of Huntington's disease.. G3 (Bethesda).
Savory FR, Ramakrishnan U.  2015.  Cryptic diversity and habitat partitioning in an economically important aphid species complex.. Infect Genet Evol. 30:230-7.
[Anonymous].  2024.  Cryo-EM structures of pannexin 1 and 3 reveal differences among pannexin isoforms . Nat Commun. 15(1)
Sreeraj VS, Puzhakkal JC, Holla B, Nadella RKumar, Sheth S, Balachander S, Ithal D, Ali F, Viswanath B, Muralidharan K et al..  2021.  Cross-diagnostic evaluation of minor physical anomalies in psychiatric disorders.. J Psychiatr Res. 142:54-62.
Koparde P, Mehta P, Reddy S, Ramakrishnan U, Mukherjee S, Robin VV.  2018.  The critically endangered forest owlet Heteroglaux blewitti is nested within the currently recognized Athene clade: A century-old debate addressed.. PLoS One. 13(2):e0192359.
Bindal G, Krishnamurthi R, Seshasayee ASai Narain, Rath D.  2017.  CRISPR-Cas-Mediated Gene Silencing Reveals RacR To Be a Negative Regulator of YdaS and YdaT Toxins in Escherichia coli K-12.. mSphere. 2(6)
Pathak T, Trivedi D, Hasan G.  2017.  CRISPR-Cas-Induced Mutants Identify a Requirement for dSTIM in Larval Dopaminergic Cells of Drosophila melanogaster.. G3 (Bethesda). 7(3):923-933.
Jambor H, Antonietti A, Alicea B, Audisio TL, Auer S, Bhardwaj V, Burgess SJ, Ferling I, Gazda MAnna, Hoeppner LH et al..  2021.  Creating clear and informative image-based figures for scientific publications.. PLoS Biol. 19(3):e3001161.
Babbitt PC, Bagos PG, Bairoch A, Bateman A, Chatonnet A, Chen MJinan, Craik DJ, Finn RD, Gloriam D, Haft DH et al..  2015.  Creating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreat.. Database (Oxford). 2015:bav063.
Case MF, Wigley BJ, Wigley-Coetsee C, Staver AC.  2020.  Could drought constrain woody encroachers in savannas? AFRICAN JOURNAL OF RANGE & FORAGE SCIENCE. 37(1):19-29.
Prakash A, Agashe D, Khan I.  2022.  The costs and benefits of basal infection resistance vs immune priming responses in an insect.. Dev Comp Immunol. 126:104261.
Chakraborty P, Datta S, McEwen BS, Chattarji S.  2020.  Corticosterone after acute stress prevents the delayed effects on the amygdala.. Neuropsychopharmacology.
Sharma SDas, Pal R, Reddy BKumar, Selvaraj BT, Raj N, Samaga KKumar, Srinivasan DJ, Ornelas L, Sareen D, Livesey MR et al..  2020.  Cortical neurons derived from human pluripotent stem cells lacking FMRP display altered spontaneous firing patterns.. Mol Autism. 11(1):52.
Köster DV, Mayor S.  2016.  Cortical actin and the plasma membrane: inextricably intertwined.. Curr Opin Cell Biol. 38:81-9.
Fernandes G, Mishra PK, Nawaz MSarfaraz, Donlin-Asp PG, Rahman MMostafizur, Hazra A, Kedia S, Kayenaat A, Songara D, Wyllie DJA et al..  2021.  Correction of amygdalar dysfunction in a rat model of fragile X syndrome. Cell Reports. 37:109805.
Joseph AM, Daw S, Sadhir I, Badrinarayanan A.  2021.  Coordination between nucleotide excision repair and specialized polymerase DnaE2 action enables DNA damage survival in non-replicating bacteria. Elife.
Das R, Sengupta T, Roy S, Chattarji S, Ray J.  2020.  Convolvulus pluricaulis extract can modulate synaptic plasticity in rat brain hippocampus.. Neuroreport. 31(8):597-604.
Vijayasarathy M, Kumar S, Venkatesha MA, Balaram P.  2023.  Contryphan sequence diversity: Messy N-terminus processing, effects on chromatographic behaviour and mass spectrometric fragmentation.. J Proteomics. :104805.
Rana D, Leena M, Nithyananth M, Pasricha R, Manivasagam G, Ramalingam M.  2016.  Control of Stem Cell Fate and Function by Polymer Nanofibers. JOURNAL OF NANOSCIENCE AND NANOTECHNOLOGY. 16(9):9015-9021.
Hasan G.  2017.  Control of protein translation by IP3R-mediated Ca(2+) release in Drosophila neuroendocrine cells.. Fly (Austin).
Kolay S, Basu U, Raghu P.  2016.  Control of diverse subcellular processes by a single multi-functional lipid phosphatidylinositol 4,5-bisphosphate [PI(4,5)P2].. Biochem J. 473(12):1681-92.
Narayanan S, Thirumalai V.  2019.  Contributions of the Cerebellum for Predictive and Instructional Control of Movement.. Curr Opin Physiol. 8:146-151.
Coetsee C., Wigley B.J, Sankaran M., Ratnam J., Augustine D.J.  2022.  Contrasting Effects of Grazing vs Browsing Herbivores Determine Changes in Soil Fertility in an East African Savanna. ECOSYSTEMS .
Osuri AM, Ratnam J, Varma V, Alvarez-Loayza P, Astaiza JHurtado, Bradford M, Fletcher C, Ndoundou-Hockemba M, Jansen PA, Kenfack D et al..  2016.  Contrasting effects of defaunation on aboveground carbon storage across the global tropics.. Nat Commun. 7:11351.
Chandrasegaran K, Kandregula SRao, Quader S, Juliano SA.  2018.  Context-dependent interactive effects of non-lethal predation on larvae impact adult longevity and body composition.. PLoS One. 13(2):e0192104.
Hinsen K, Vaitinadapoule A, Ostuni MA, Etchebest C, Lacapere J-J.  2015.  Construction and validation of an atomic model for bacterial TSPO from electron microscopy density, evolutionary constraints, and biochemical and biophysical data.. Biochim Biophys Acta. 1848(2):568-80.
Juul JS, Jensen MH, Krishna S.  2019.  Constraints on somite formation in developing embryos.. J R Soc Interface. 16(158):20190451.
Singh A, Thutupalli S, Kumar M, Ameta S.  2024.  Constrained dynamics of DNA oligonucleotides in phase-separated droplets.. Biophys J.
Khan A, Tyagi A.  2021.  Considerations for Initiating a Wildlife Genomics Research Project in South and South-East Asia. JOURNAL OF THE INDIAN INSTITUTE OF SCIENCE.
Jaganathan D, Rajakani R, Doddamani D, Saravanan D, Pulipati S, G VHari Sunda, Sellamuthu G, Jayabalan S, Kumari K, Parthasarathy P et al..  2023.  A conserved SNP variation in the pre-miR396c flanking region in Oryza sativa indica landraces correlates with mature miRNA abundance.. Sci Rep. 13(1):2195.
Narjala A, Nair A, Tirumalai V, G Sundar VHari, Shivaprasad PV.  2020.  A conserved sequence signature is essential for robust plant miRNA biogenesis.. Nucleic Acids Res.
Till SM, Asiminas A, Jackson AD, Katsanevaki D, Barnes SA, Osterweil EK, Bear MF, Chattarji S, Wood ER, Wyllie DJA et al..  2015.  Conserved hippocampal cellular pathophysiology but distinct behavioural deficits in a new rat model of FXS.. Hum Mol Genet. 24(21):5977-84.
Chatterjee KSankar, Tripathi V, Das R.  2019.  A conserved and buried edge-to-face aromatic interaction in Small Ubiquitin-like Modifier (SUMO) has a role in SUMO stability and function.. J Biol Chem.
Singh P, Srivathsa A, Macdonald DW.  2020.  Conservation status of the dhole Cuon alpinus in north-east India, with a focus on Dampa Tiger Reserve, Mizoram. ORYX. 54(6):873-877.
Natesh M, Atla G, Nigam P, Jhala YV, Zachariah A, Borthakur U, Ramakrishnan U.  2017.  Conservation priorities for endangered Indian tigers through a genomic lens.. Sci Rep. 7(1):9614.
Goheen JR, Augustine DJ, Veblen KE, Kimuyu DM, Palmer TM, Porensky LM, Pringle RM, Ratnam J, Riginos C, Sankaran M et al..  2018.  Conservation lessons from large-mammal manipulations in East African savannas: the KLEE, UHURU, and GLADE experiments.. Ann N Y Acad Sci.
Chakrabarti KS, Li J, Das R, R Byrd A.  2017.  Conformational Dynamics and Allostery in E2:E3 Interactions Drive Ubiquitination: gp78 and Ube2g2.. Structure.
Vijayasarathy M, Balaram P.  2019.  Cone snail prolyl-4-hydroxylase α-subunit sequences derived from transcriptomic data and mass spectrometric analysis of variable proline hydroxylation in C. amadis venom.. J Proteomics. 194:37-48.
Vijayasarathy M, Basheer SM, Balaram P.  2018.  Cone Snail Glutaminyl Cyclase Sequences from Transcriptomic Analysis and Mass Spectrometric Characterization of Two Pyroglutamyl Conotoxins.. J Proteome Res. 17(8):2695-2703.
Kumar S, Vijayasarathy M, Venkatesha MA, Sunita P, Balaram P.  2020.  Cone snail analogs of the pituitary hormones oxytocin/vasopressin and their carrier protein neurophysin. Proteomic and transcriptomic identification of conopressins and conophysins.. Biochim Biophys Acta Proteins Proteom. :140391.
Asopa A, Bhalla US.  2023.  A computational view of short-term plasticity and its implications for E-I balance.. Curr Opin Neurobiol. 81:102729.
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Sharma A, Tiwari V, Sowdhamini R.  2020.  Computational search for potential COVID-19 drugs from FDAapproved drugs and small molecules of natural origin identifies several anti-virals and plant products.. J Biosci. 45
Karpe SD, Dhingra S, Brockmann A, Sowdhamini R.  2017.  Computational genome-wide survey of odorant receptors from two solitary bees Dufourea novaeangliae (Hymenoptera: Halictidae) and Habropoda laboriosa (Hymenoptera: Apidae).. Sci Rep. 7(1):10823.
Harini K, Sowdhamini R.  2015.  Computational Approaches for Decoding Select Odorant-Olfactory Receptor Interactions Using Mini-Virtual Screening.. PLoS One. 10(7):e0131077.
Chauhan PKumar, Sowdhamini R.  2023.  Computational analysis of the flexibility in the disordered linker region connecting LIM domains in cysteine-glycine-rich protein.. Front Genet. 14:1134509.
Patil P, Skariyachan S, Mutt E, Kaushik S.  2016.  Computational Analysis of the Domain Architecture and Substrate-Gating Mechanism of Prolyl Oligopeptidases from Shewanella woodyi and Identification of Probable Lead Molecules.. Interdiscip Sci. 8(3):284-93.
K Shafi M, Sowdhamini R.  2022.  Computational analysis of potential candidate genes involved in the cold stress response of ten Rosaceae members.. BMC Genomics. 23(1):516.
Pulikkottil VVarghese, Somashekar BPriya, Bhalla US.  2021.  Computation, wiring, and plasticity in synaptic clusters.. Curr Opin Neurobiol. 70:101-112.
Gupta A, Sabarinathan R, Bala P, Donipadi V, Vashisht D, Katika MRao, Kandakatla M, Mitra D, Dalal A, Bashyam MDharan.  2021.  A comprehensive profile of genomic variations in the SARS-CoV-2 isolates from the state of Telangana, India.. J Gen Virol.
Carvalho APaula S, Owens HL, St Laurent RA, Earl C, Dexter KM, Messcher RL, Willmott KR, Aduse-Poku K, Collins SC, Homziak NT et al..  2024.  Comprehensive phylogeny of Pieridae butterflies reveals strong correlation between diversification and temperature.. iScience. 27(4):109336.
Condamine FL, Allio R, Reboud EL, Dupuis JR, Toussaint EFA, Mazet N, Hu S-J, Lewis DS, Kunte K, Cotton AM et al..  2023.  A comprehensive phylogeny and revised taxonomy illuminate the origin and diversification of the global radiation of Papilio (Lepidoptera: Papilionidae).. Mol Phylogenet Evol. 183:107758.
Lakshmanan V, N ST, Bansal D, Padubidri SV, Palakodeti D, Krishna S.  2021.  Comprehensive annotation and characterization of planarian tRNA and tRNA-derived fragments (tRFs).. RNA.
Ditlev JA, Vega AR, Köster DVasco, Su X, Tani T, Lakoduk AM, Vale RD, Mayor S, Jaqaman K, Rosen MK.  2019.  A composition-dependent molecular clutch between T cell signaling condensates and actin.. Elife. 8
Bakker JD, Price JN, Henning JA, , Sankaran M, et al.  2023.  Compositional variation in grassland plant communities. ECOSPHERE . 14(6):e4542.
Dias M, Pattabiraman C, Siddappa S, Gowda M, Shet A, Smith D, Muehlemann B, Tamma K, Solomon T, Jones T et al..  2019.  Complete assembly of a dengue virus type 3 genome from a recent genotype III clade by metagenomic sequencing of serum.. Wellcome Open Res. 3:44.
Morin DJ, Boulanger J, Bischof R, Lee DC, Ngoprasert D, Fuller AK, McLellan B, Steinmetz R, Sharma S, Garshelis D et al..  2022.  Comparison of methods for estimating density and population trends for low-density Asian bears. GLOBAL ECOLOGY AND CONSERVATION. 35(e02058)
Vinothkumar KR, Arya C, Ramanathan G, Subramanian R.  2020.  Comparison of CryoEM and X-ray structures of dimethylformamidase.. Prog Biophys Mol Biol.
Attiwilli S, Ravikanthachari N, Kunte K.  2023.  A comparison between time-constrained counts and line transects as methods to estimate butterfly diversity and monitor populations in tropical habitats. INSECT CONSERVATION AND DIVERSITY.
Chakravarty R, Chattopadhyay B, Ramakrishnan U.  2018.  Comparative Population Structure in Species of Bats Differing in Ecology and Morphology in the Andaman Islands, India. Acta Chiropterologica. 20(1):85-98.