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2023
Basu DNath, Bhaumik V, Kunte K.  2023.  The tempo and mode of character evolution in the assembly of mimetic communities.. Proc Natl Acad Sci U S A. 120(1):e2203724120.
Wortel MT, Agashe D, Bailey SF, Bank C, Bisschop K, Blankers T, Cairns J, Colizzi ESandro, Cusseddu D, Desai MM et al..  2023.  Towards evolutionary predictions: Current promises and challenges.. Evol Appl. 16(1):3-21.
Mann R, Notani D.  2023.  Transcription factor condensates and signaling driven transcription.. Nucleus. 14(1):2205758.
Syiem BL, Driscoll DA, Vasudev D, Goswami VR.  2023.  Tropical agricultural wooded land uses support high site use of forest birds. Biological Conservation. 281:109986.
2022
Das AAbin, Ratnam J.  2022.  The thermal niche and phylogenetic assembly of evergreen tree metacommunities in a mid-to-upper tropical montane zone.. Proc Biol Sci. 289(1977):20220038.
Marathe K, Sanap R, Joglekar A, Caleb JTD, Maddison WP.  2022.  Three new and notes on two other jumping spider species of the genus Stenaelurillus Simon, 1886 (Salticidae: Aelurillina) from the Deccan Plateau, India.. Zootaxa. 5125(1):1-19.
Khandekar A, Thackeray T, Agarwal I.  2022.  Three new cryptic species of South Asian Cnemaspis Strauch, 1887 (Squamata, Gekkonidae) from Karnataka, India. VERTEBRATE ZOOLOGY . 72:115-142.
Rana D, Samad I, Rastogi S.  2022.  To a charismatic rescue: Designing a blueprint to steer Fishing Cat conservation for safeguarding Indian wetlands. JOURNAL FOR NATURE CONSERVATION. 68(126225)
Farooq U, Notani D.  2022.  Transcriptional regulation of INK4/ARF locus by cis and trans mechanisms.. Front Cell Dev Biol. 10:948351.
Singh A, Kandi AReddy, Jayaprakashappa D, Thuery G, Purohit DJ, Huelsmeier J, Singh R, Pothapragada SShruti, Ramaswami M, Bakthavachalu B.  2022.  The Transcriptional Response to Oxidative Stress is Independent of Stress-Granule Formation.. Mol Biol Cell. :mbcE21080418.
K Shafi M, Sajeevan RSivarajan, Kouser S, Vishnuprasad CN, Sowdhamini R.  2022.  Transcriptome profiling of two Moringa species and insights into their antihyperglycemic activity.. BMC Plant Biol. 22(1):561.
Chakrabarti A, Kaushik M, Khan J, Soota D, Ponnusamy K, Saini S, Manvati S, Singhal J, Ranganathan A, Pati S et al..  2022.  tREPs-A New Class of Functional tRNA-Encoded Peptides.. ACS Omega. 7(22):18361-18373.
Dhanya SKumari, Hasan G.  2022.  Two photon imaging of calcium responses in murine Purkinje neurons.. STAR Protoc. 3(1):101105.
2021
Heltberg ML, Krishna S, Kadanoff LP, Jensen MH.  2021.  A tale of two rhythms: Locked clocks and chaos in biology.. Cell Syst. 12(4):291-303.
Caleb JTD, Sanap RV, Prajapati DA, Bambhaniya P.  2021.  Taxonomic notes on two jumping spider species of the genus Epocilla Thorell, 1887 (Araneae: Salticidae: Chrysillini) from India and Pakistan. ARTHROPODA SELECTA . 30:221-229.
Young A.M., Kohl P.L., Rutschmann B., teffen-Dewenter I, Brockmann A.  2021.  Temporal and spatial foraging patterns of three Asian honey bee species in Bangalore, India. Apidologie .
Blobel GA, Higgs DR, Mitchell JA, Notani D, Young RA.  2021.  Testing the super-enhancer concept.. Nat Rev Genet.
Subaharan K, Senthoorraja R, Manjunath S, Thimmegowda GG, Pragadheesh VS, Bakthavatsalam N, Mohan MG, Senthil-Nathan S, David KJ, Basavarajappa S et al..  2021.  Toxicity, behavioural and biochemical effect of Piper betle L. essential oil and its constituents against housefly, Musca domestica L.. Pestic Biochem Physiol. 174(104804)
Mondal S, Dubey J, Awasthi A, Sure GReddy, Vasudevan A, Koushika SP.  2021.  Tracking mitochondrial density and positioning along a growing neuronal process in individual neuron using a long-term growth and imaging microfluidic device.. eNeuro.
Thatte P, Tyagi A, Neelakantan A, Natesh M, Sen M, Thekaekara T.  2021.  Trends in Wildlife Connectivity Science from the Biodiverse and Human-Dominated South Asia. JOURNAL OF THE INDIAN INSTITUTE OF SCIENCE.
Srivathsa A, Rodrigues RG, Ben Toh K, Zachariah A, Taylor RW, Oli MK, Ramakrishnan U.  2021.  The truth about scats and dogs: Next-generation sequencing and spatial capture-recapture models offer opportunities for conservation monitoring of an endangered social canid. BIOLOGICAL CONSERVATION. (109028)
Raja SO, Sivaraman G, Biswas S, Singh G, Kalim F, Kandaswamy P, Gulyani A.  2021.  A Tunable Palette of Molecular Rotors Allows Multicolor, Ratiometric Fluorescence Imaging and Direct Mapping of Mitochondrial Heterogeneity.. ACS Appl Bio Mater. 4(5):4361-4372.
Thamm M, Wagler K, Brockmann A, Scheiner R.  2021.  Tyramine 1 Receptor Distribution in the Brain of Corbiculate Bees Points to a Conserved Function.. Brain Behav Evol. :1-13.
2020
Narayanankutty A, Sasidharan A, Job JT.  2020.  Targeting Toll like Receptors in Cancer: Role of TLR Natural and Synthetic Modulators. Curr Pharm Des. 26(39):5040-5053.
Joshi S, Subramanian KA, Babu R, Sawant D, Kunte K.  2020.  Three new species of Protosticta Selys, 1885 (Odonata: Zygoptera: Platystictidae) from the Western Ghats, India, with taxonomic notes on P. mortoni Fraser, 1922 and rediscovery of P. rufostigma Kimmins, 1958.. Zootaxa. 4858(2):zootaxa.4858.2.1.
Karanth UK, Kumar S, Karanth K.  2020.  Tigers against the odds: Applying macro-ecology to species recovery in India. BIOLOGICAL CONSERVATION. :ArticleNo.108846.
Deshmukh R, Lakhe D, Kunte K.  2020.  Tissue-specific developmental regulation and isoform usage underlie the role of in sex differentiation and mimicry in swallowtails.. R Soc Open Sci. 7(9):200792.
Basu DNath, Kunte K.  2020.  Tools of the trade: MicroCT reveals native structure and functional morphology of organs that drive caterpillar-ant interactions.. Sci Rep. 10(1):10593.
Kalappurakkal JMathew, Sil P, Mayor S.  2020.  Toward a new picture of the living plasma membrane.. Protein Sci. 29(6):1355-1365.
Pasha SNaseer, K Shafi M, Joshi AG, Meenakshi I, Harini K, Mahita J, Sajeevan RSivarajan, Karpe SD, Ghosh P, Nitish S et al..  2020.  The transcriptome enables the identification of candidate genes behind medicinal value of Drumstick tree (Moringa oleifera).. Genomics. 112(1):621-628.
Kalmankar NV, Venkatesan R, Balaram P, Sowdhamini R.  2020.  Transcriptomic profiling of the medicinal plant Clitoria ternatea: identification of potential genes in cyclotide biosynthesis.. Sci Rep. 10(1):12658.
Osuri A.M, Machado S, Ratnam J., Sankaran M., Ayyappan N, Muthuramkumar S, Parthasarathy N, Pélissier R, Ramesh BR, DeFries R et al..  2020.  Tree diversity and carbon storage cobenefits in tropical human‐dominated landscapes. Conservation Letters.
Khot M, Sreekumar D, Jahagirdar S, Kulkarni A, Hari K, Faseela EEbrahimkut, Sabarinathan R, Jolly MKumar, Sengupta K.  2020.  Twist1 induces chromosomal instability (CIN) in colorectal cancer cells.. Hum Mol Genet. 29(10):1673-1688.
Agarwal I, Bauer AM, Pal S, Srikanthan AN, Khandekar A.  2020.  Two more new Hemiphyllodactylus Bleeker, 1860 (Squamata: Gekkonidae) from Tamil Nadu, India.. Zootaxa. 4729(2):zootaxa.4729.2.6.
2019
Mishra R, Kohli S, Malhotra N, Bandyopadhyay P, Mehta M, Munshi MH, Adiga V, Ahuja VKamal, Shandil RK, Rajmani RS et al..  2019.  Targeting redox heterogeneity to counteract drug tolerance in replicating .. Sci Transl Med. 11(518)
McClanahan TR, Darling ES, Maina JM, Muthiga NA, D'agata S, Jupiter SD, Arthur R, Wilson SK, Mangubhai S, Nand Y et al..  2019.  Temperature patterns and mechanisms influencing coral bleaching during the 2016 El Nino. Nature Climate Change. 9:845–851.
Wigley BJ, Coetsee C, Augustine DJ, Ratnam J, Hattas D, Sankaran M..  2019.  A thorny issue: Woody plant defence and growth in an East African savanna. JOURNAL OF ECOLOGY. 107(4):1839-1851.
Chakraborty P, Chattarji S.  2019.  Timing is everything: differential effects of chronic stress on fear extinction.. Psychopharmacology (Berl). 236(1):73-86.
Tiwari V, Karpe SD, Sowdhamini R.  2019.  Topology prediction of insect olfactory receptors.. Curr Opin Struct Biol. 55:194-203.
Raghunathan S, Badrinarayanan A.  2019.  Tracking Bacterial Chromosome Dynamics with Microfluidics-Based Live Cell Imaging.. Methods Mol Biol. 2004:223-238.
Natesan D, Saxena N, Ekeberg Ö, Sane SP.  2019.  Tuneable reflexes control antennal positioning in flying hawkmoths.. Nat Commun. 10(1):5593.
Khandekar A, Thackeray T, Agarwal I.  2019.  Two more new species of Cnemaspis Strauch, 1887 (Squamata: Gekkonidae) from the northern Western Ghats, Maharashtra, India.. Zootaxa. 4656(1):zootaxa.4656.1.2.
Khandekar A, Gaitonde N, Agarwal I.  2019.  Two new Cnemaspis Strauch, 1887 (Squamata: Gekkonidae) from the Shevaroy massif, Tamil Nadu, India, with a preliminary ND2 phylogeny of Indian Cnemaspis.. Zootaxa. 4609(1):zootaxa.4609.1.3.
2018
Jain R, Brockmann A.  2018.  Time-restricted foraging under natural light/dark condition shifts the molecular clock in the honey bee, Apis mellifera.. Chronobiol Int. :1-12.
Aloysius A, DasGupta R, Dhawan J.  2018.  The transcription factor Lef1 switches partners from β-catenin to Smad3 during muscle stem cell quiescence.. Sci Signal. 11(540)
Louis LK, Gopurappilly R, Surendran H, Dutta S, Pal R.  2018.  Transcriptional profiling of human neural precursors post alcohol exposure reveals impaired neurogenesis via dysregulation of ERK signaling and miR-145.. J Neurochem. 146(1):47-62.
Mahajan S, Agashe D.  2018.  Translational selection for speed is not sufficient to explain variation in bacterial codon usage bias.. Genome Biol Evol.
Freeman SA, Vega A, Riedl M, Collins RF, Ostrowski PP, Woods EC, Bertozzi CR, Tammi MI, Lidke DS, Johnson P et al..  2018.  Transmembrane Pickets Connect Cyto- and Pericellular Skeletons Forming Barriers to Receptor Engagement.. Cell. 172(1-2):305-317.e10.
Agarwal I, Mahony S, Giri VB, Chaitanya R, Bauer AM.  2018.  Two new species of bent toed geckos, Cyrtodactylus Gray, 1827 (Squamata: Gekkonidae) from Northeast India with comments on name-bearing types from the region . ZOOTAXA. 4420 (3):334-356.
Agarwal I, Khandekar A, Ramakrishnan U, Vyas R, Giri VB.  2018.  Two new species of the Ophisops microlepis (Squamata: Lacertidae) complex from northwestern India with a key to Indian Ophisops . JOURNAL OF NATURAL HISTORY . 52(13-16):819-847.
2017
Agavekar G, Garcia FHita, Economo EP.  2017.  Taxonomic overview of the hyperdiverse ant genus Tetramorium Mayr (Hymenoptera, Formicidae) in India with descriptions and X-ray microtomography of two new species from the Andaman Islands.. PeerJ. 5:e3800.
Datta-Roy A, Deepak V., Chaitanya R, Murthy C, Bhosale H, Lajmi A, K. Karanth P, Kunte K, Giri V.  2017.  On the taxonomic status of Eurylepis poonaensis (Squamata: Scincidae): resolving a long-standing conundrum. SALAMANDRA. 53(3):389-397.
Neelamraju S, Oligschleger C, J Schön C.  2017.  The threshold algorithm: Description of the methodology and new developments.. J Chem Phys. 147(15):152713.
Heltberg ML, Krishna S, Jensen MH.  2017.  Time Correlations in Mode Hopping of Coupled Oscillators. Journal of Statistical Physics. 167(3-4):792–805.
Joshi J, Edgecombe GD.  2017.  Tracking the variability of phenotypic traits on a molecular phylogeny: an example from scolopendrid centipedes in peninsular India. Organisms Diversity & Evolution. 17(2):393–408.
Kondrychyn I, Robra L, Thirumalai V.  2017.  Transcriptional Complexity and Distinct Expression Patterns of auts2 Paralogs in Danio rerio.. G3 (Bethesda).
Robin VV, Vishnudas CK, Gupta P, Rheindt FE, Hooper DM, Ramakrishnan U, Reddy S.  2017.  Two new genera of songbirds represent endemic radiations from the Shola Sky Islands of the Western Ghats, India.. BMC Evol Biol. 17(1):31.
Sanap RV, Joglekar A, Prajapati D, Caleb JTD.  2017.  Two new species of Langelurillus Próchniewicz, 1994 from India (Araneae: Salticidae: Aelurillina). Zootaxa. 4318(1):135-146.
Holla H, Sharma A, Bhat P, Shinde D, Das B.  2017.  Two new substituted polychiral 5, 6-dihydro-alpha-pyrones from Orthosiphon diffusus and molecular docking studies. PHYTOCHEMISTRY LETTERS. 22:21-26.
2016
Ghosh P, Grellscheid SNagaraja, Sowdhamini R.  2016.  A tale of two paralogs: human Transformer2 proteins with differential RNA-binding affinities.. J Biomol Struct Dyn. 34(9):1979-86.
Vinekar RS, Sowdhamini R.  2016.  Three-dimensional modelling of the voltage-gated sodium ion channel from Anopheles gambiae reveals spatial clustering of evolutionarily conserved acidic residues at the extracellular sites.. Curr Neuropharmacol.
Cockcroft S, Raghu P.  2016.  Topological organisation of the phosphatidylinositol 4,5-bisphosphate-phospholipase C resynthesis cycle: PITPs bridge the ER-PM gap.. Biochem J. 473(23):4289-4310.
Barah P, N MNaika B, Jayavelu NDoni, Sowdhamini R, Shameer K, Bones AM.  2016.  Transcriptional regulatory networks in Arabidopsis thaliana during single and combined stresses.. Nucleic Acids Res. 44(7):3147-64.
2015
Shrivastava R, Köster D, Kalme S, Mayor S, Neerathilingam M.  2015.  Tailor-made ezrin actin binding domain to probe its interaction with actin in-vitro.. PLoS One. 10(4):e0123428.
Mondol S, Sridhar V, Yadav P, Gubbi S, Ramakrishnan U.  2015.  Tracing the geographic origin of traded leopard body parts in the indian subcontinent with DNA-based assignment tests.. Conserv Biol. 29(2):556-64.
Raghupathy R, Anilkumar AAmbika, Polley A, Singh PPal, Yadav M, Johnson C, Suryawanshi S, Saikam V, Sawant SD, Panda A et al..  2015.  Transbilayer lipid interactions mediate nanoclustering of lipid-anchored proteins.. Cell. 161(3):581-94.
Malhotra P, Udgaonkar JB.  2015.  Tuning Cooperativity on the Free Energy Landscape of Protein Folding.. Biochemistry. 54(22):3431-41.
Lannes L, Halder S, Krishnan Y, Schwalbe H.  2015.  Tuning the pH Response of i-Motif DNA Oligonucleotides.. Chembiochem. 16(11):1647-56.