Author Title Type [ Year(Asc)]
2022
Natesan R, Gowrishankar K, Kuttippurathu L, Kumar PBSunil, Rao M.  2022.  Active Remodeling of Chromatin and Implications for Folding.. J Phys Chem B.
Bansal A, Das A, Rao M.  2022.  Active segregation dynamics in the living cell. INDIAN JOURNAL OF PHYSICS.
Panda A, Thakur R, Kumari A, Raghu P.  2022.  Analysis of Lipid Signaling in Drosophila Photoreceptors using Mass Spectrometry.. J Vis Exp. (181)
Kumar M, Singh A, Del Secco B, Baranov MV, van den Bogaart G, Sacanna S, Thutupalli S.  2022.  Assembling anisotropic colloids using curvature-mediated lipid sorting.. Soft Matter.
Bagchi B, Seal S, Raina M, Basu DNath, Khan I.  2022.  Carcass Scavenging Relaxes Chemical-Driven Female Interference Competition in Flour Beetles. AMERICAN NATURALIST.
Agashe D, Maheshwary S, Pattanaik JKumar, Prakash J, Bhatt P, Arya S.S, Chatterjee S, Kumar P, Singh P, Abbas N et al..  2022.  Career challenges for young independent researchers in India. CURRENT SCIENCE. 122(2):135-143.
Morin DJ, Boulanger J, Bischof R, Lee DC, Ngoprasert D, Fuller AK, McLellan B, Steinmetz R, Sharma S, Garshelis D et al..  2022.  Comparison of methods for estimating density and population trends for low-density Asian bears. GLOBAL ECOLOGY AND CONSERVATION. 35(e02058)
Coetsee C., Wigley B.J, Sankaran M., Ratnam J., Augustine D.J.  2022.  Contrasting Effects of Grazing vs Browsing Herbivores Determine Changes in Soil Fertility in an East African Savanna. ECOSYSTEMS .
Prakash A, Agashe D, Khan I.  2022.  The costs and benefits of basal infection resistance vs immune priming responses in an insect.. Dev Comp Immunol. 126:104261.
Sahasrabuddhe V, Ghosh HS.  2022.  Cx3Cr1-Cre induction leads to microglial activation and IFN-1 signaling caused by DNA damage in early postnatal brain.. Cell Rep. 38(3):110252.
Tanalgo KC, Tabora JAries G, de Oliveira HFernandes, Haelewaters D, Beranek CT, Otálora-Ardila A, Bernard E, Gonçalves F, Eriksson A, Donnelly M et al..  2022.  DarkCideS 1.0, a global database for bats in karsts and caves.. Sci Data. 9(1):155.
Sarkar SR, Dubey VKumar, Jahagirdar A, Lakshmanan V, Haroon MMohamed, Sowndarya S, Sowdhamini R, Palakodeti D.  2022.  DDX24 is required for muscle fiber organization and the suppression of wound-induced Wnt activity necessary for pole re-establishment during planarian regeneration.. Dev Biol.
Singh J, Raina R, Vinothkumar KR, Anand R.  2022.  Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.. ACS Chem Biol.
Swetha C, Narjala A, Pandit A, Tirumalai V, Shivaprasad PV.  2022.  Degradome comparison between wild and cultivated rice identifies differential targeting by miRNAs.. BMC Genomics. 23(1):53.
Amarasinghe AAThasun, Ganesh S.R., Mirza ZA, Campbell PD, Pauwels OSG, Schweiger S, Kupfer A, Patel H, Karunarathna S, Deuti K et al..  2022.  The delusion of stripes: A century-old mystery of five-lined sun skinks (Reptilia: Scincidae: Eutropis) of Peninsular India elucidated. Zoologischer Anzeiger. 296:71-90.
Mondal S, K Shafi M, Raizada A, Song H, Badigannavar AM, Sowdhamini R.  2022.  Development of candidate gene-based markers and map-based cloning of a dominant rust resistance gene in cultivated groundnut (Arachis hypogaea L.).. Gene. 827:146474.
Singh A, Thakur NL, Sheikh F.  2022.  Differential tolerance capacity of intertidal organisms (sponge and zoanthid) to the environmental stresses: Preliminary Bndings from a rockpool transplantation experiment. JOURNAL OF EARTH SYSTEM SCIENCE. 131(1)
Pulipati S, Somasundaram S, Rana N, Kumaresan K, Shafi M, Civan P, Sellamuthu G, Jaganathan D, Ramaravi PVenkatesan, Punitha S. et al..  2022.  Diversity of Sodium Transporter HKT1;5 in Genus Oryza. RICE SCIENCE. 29(1):31-46.
Trisal S, Aranha M, Chodankar A, VijayRaghavan K, Ramaswami M.  2022.  A DROSOPHILA CIRCUIT FOR HABITUATION OVERRIDE.. J Neurosci.
Kalmankar NV, Pavalam M, Indrakumar S, Srinivasan N, Sowdhamini R.  2022.  DSDBASE 2.0: updated version of DiSulphide dataBASE, a database on disulphide bonds in proteins.. Database (Oxford). 2022
Naik D, R. Rao SPrasad, Kunte K, Mustak MS.  2022.  Ecological monitoring and indicator taxa: butterfly communities in heterogeneous landscapes of the Western Ghats and Malabar coast, India. JOURNAL OF INSECT CONSERVATION.
Rebehmed J, de Brevern AG, Sowdhamini R, Joseph APraveen.  2022.  Editorial: Advances in Molecular Docking and Structure-Based Modelling.. Front Mol Biosci. 9:839826.
Kumar H, Udgaonkar JB.  2022.  Elongation of Fibrils Formed by a Tau Fragment is Inhibited by a Transient Dimeric Intermediate.. J Phys Chem B.
Agarwal I, Bauer AM, Gamble T, Giri VB, Jablonski D, Khandekar A, Mohapatra PP, Masroor R, Mishra A, Ramakrishnan U.  2022.  The evolutionary history of an accidental model organism, the leopard gecko Eublepharis macularius (Squamata: Eublepharidae).. Mol Phylogenet Evol. :107414.
Mahajan S, Agashe D.  2022.  Evolutionary jumps in bacterial GC content.. G3 (Bethesda).
Varma A.  2022.  Feeling like a 'real' scientist.. Elife. 11
Panicker D, Baumgartner MF, Stafford KM.  2022.  Fine-scale spatial and temporal acoustic occurrence of island-associated odontocetes near a mid-oceanic atoll in the northern Indian Ocean. MARINE ECOLOGY PROGRESS SERIES. 683:195-208.
Mukhopadhyay A, Quader S.  2022.  Fine-tuned spatiotemporal dynamics of sporophylls in movement-assisted dichogamy: A study on Clerodendrum infortunatum. PLANT SPECIES BIOLOGY .
Notani D.  2022.  First glimpse of enhancers in gene regulation.. Nat Rev Genet.
Basu DSain, Bhavsar R, Gulami I, Chavda S, Lingamallu SManoz, Muddashetty R, Veeranna C, Chattarji S, Thimmulappa R, Bhattacharya A et al..  2022.  FMRP protects the lung from xenobiotic stress by facilitating the Integrated Stress Response.. J Cell Sci.
Tyagi A., Khan A., Thatte P., Ramakrishnan U..  2022.  Genome-wide SNP markers from fecal samples reveal anthropogenic impacts on connectivity: case of a small carnivore in the central Indian landscape. ANIMAL CONSERVATION .
Pal A, Iyer MS, Srinivasan S, Seshasayee ASai Narain, Venkatesh KV.  2022.  Global pleiotropic effects in adaptively evolved lacking CRP reveal molecular mechanisms that define the growth physiology.. Open Biol. 12(2):210206.
Yadav A, Vagne Q, Sens P, Iyengar G, Rao M.  2022.  Glycan processing in the Golgi: optimal information coding and constraints on cisternal number and enzyme specificity.. Elife. 11
Bhatia S, Udgaonkar JB.  2022.  Heterogeneity in Protein Folding and Unfolding Reactions.. Chem Rev.
Amarasinghe AAT, Karunarathna S, Campbell PD, Gayan AKA, Ranasinghe WDB, De Silva A, Mirza ZA.  2022.  The hidden diversity and inland radiation of Sri Lanka's ground-dwelling geckos of the genus Cyrtodactylus (Reptilia: Gekkonidae). SYSTEMATICS AND BIODIVERSITY . 20(1):1-25.
Aylward M, Sagar V, Natesh M, Ramakrishnan U.  2022.  How methodological changes have influenced our understanding of population structure in threatened species: insights from tiger populations across India.. Philos Trans R Soc Lond B Biol Sci. 377(1852):20200418.
Mukherjee S, Murata A, Ishida R, Sugai A, Dohno C, Hamada M, Krishna S, Nakatani K.  2022.  HT-SELEX-based identification of binding pre-miRNA hairpin-motif for small molecules.. Mol Ther Nucleic Acids. 27:165-174.
Akhtar BM, Bhatia P, Acharya S, Sharma S, Sharma Y, Aswathy BS, Ganapathy K, Vasudevan A, Raghu P.  2022.  A human stem cell resource to decipher the biochemical and cellular basis of neurodevelopmental defects in Lowe Syndrome.. Biol Open.
Sankaradoss A, Jagtap S, Nazir J, Moula S-E, Modak A, Fialho J, Iyer M, Shastri JS, Dias M, Gadepalli R et al..  2022.  Immune profile and responses of a novel Dengue DNA vaccine encoding EDIII-NS1 consensus design based on Indo-African sequences.. Mol Ther.
Chen S., Li J., Vinothkumar KR, Henderson R..  2022.  Interaction of human erythrocyte catalase with air-water interface in cryoEM.. Microscopy (Oxf). 71((Supplement_1)):i51-i59.
Chauhan PKumar, Sowdhamini R.  2022.  LIM domain-wide comprehensive virtual mutagenesis provides structural rationale for cardiomyopathy mutations in CSRP3.. Sci Rep. 12(1):3562.
Chen N, Zhang Y, Adel M, Kuklin EA, Reed ML, Mardovin JD, Bakthavachalu B, VijayRaghavan K, Ramaswami M, Griffith LC.  2022.  Local translation provides the asymmetric distribution of CaMKII required for associative memory formation.. Curr Biol.
Punjabi GA, Havmøller LWorsøe, Havmøller RWorsøe, Ngoprasert D, Srivathsa A.  2022.  Methodological approaches for estimating populations of the endangered dhole .. PeerJ. 10:e12905.
Malhotra P, Udgaonkar JB.  2022.  Native State Hydrogen Exchange-Mass Spectrometry Methods to Probe Protein Folding and Unfolding.. Methods Mol Biol. 2376:143-159.
Mirza ZA, Bragin AM, Bhosale H, Gowande G, Patel H, Poyarkov NA.  2022.  A new ancient lineage of ablepharine skinks (Sauria: Scincidae) from eastern Himalayas with notes on origin and systematics of the group. PeerJ. 10:e12800.
Mirza ZA, Bhosale H, Ansari F, Phansalkar P, Sawant M, Gowande G, Patel H.  2022.  A new species of bent-toed geckos of the genus Cyrtodactylus Gray, 1827 from western Arunachal Pradesh, India. HERPETOZOA . 35:65-76.
Sanap R, Pawar S, Joglekar A, Khandekar A.  2022.  A new species of Conothele Thorell, 1878 (Aranei Halonoproctidae) from the northern Western Ghats, India. ARTHROPODA SELECTA. 31(1):79-89.
Pachamuthu K, Sundar VHari, Narjala A, Singh RR, Das S, Pal HCYAvik, Shivaprasad PV.  2022.  Nitrate-dependent regulation of miR444-OsMADS27 signaling cascade controls root development in rice.. J Exp Bot.
Saini N, Lakshminarayanan S, Kundu P, Sarin A.  2022.  Notch1 Modulation of Cellular Calcium Regulates Mitochondrial Metabolism and Anti-Apoptotic Activity in T-Regulatory Cells.. Front Immunol. 13:832159.
Bhattacharyya T, Nayak S, Goswami S, Gadiyaram V, Mathew OK, Sowdhamini R.  2022.  PASS2.7: a database containing structure-based sequence alignments and associated features of protein domain superfamilies from SCOPe.. Database (Oxford). 2022
Sidhanth C, Bindhya S, Krishnapriya S, Manasa P, Shabna A, Alifia J, Patole C, Kumar V, Garg M, Ganesan TS.  2022.  Phosphoproteome of signaling by ErbB2 in ovarian cancer cells.. Biochim Biophys Acta Proteins Proteom. :140768.
Wang Z, Da W, Negi CSingh, Ghimire PLal, Wangdi K, Yadav PK, Pubu Z, Lama L, Yarpel K, Maunsell SC et al..  2022.  Profiling, monitoring and conserving caterpillar fungus in the Himalayan region using anchored hybrid enrichment markers.. Proc Biol Sci. 289(1973):20212650.
Naskar S, Datta S, Chattarji S.  2022.  Riluzole prevents stress-induced spine plasticity in the hippocampus but mimics it in the amygdala.. Neurobiol Stress. 18:100442.
Dey R, Chattarji S.  2022.  The same stress elicits different effects on anxiety-like behavior in rat models of Fmr1 and Pten.. Behav Brain Res. :113892.
Wahl LM, Agashe D.  2022.  Selection bias in mutation accumulation.. Evolution.
Kumari A, Ghosh A, Kolay S, Raghu P.  2022.  Septins tune lipid kinase activity and PI(4,5)P turnover during G-protein-coupled PLC signalling in vivo.. Life Sci Alliance. 5(6)
Dubey J, Mondal S, Koushika SP.  2022.  A Simple Microfluidic Chip for Long-Term Growth and Imaging of Caenorhabditis elegans.. J Vis Exp. (182)
Mitra R, Hasan G.  2022.  Store-operated Ca2+ entry regulates neuronal gene expression and function.. Curr Opin Neurobiol. 73:102520.
Gouthaman S, Jayaraj A, Sugunalakshmi M, Sivaraman G, P CAyya Swamy.  2022.  Supramolecular self-assembly mediated aggregation-induced emission of fluorene-derived cyanostilbenes: multifunctional probes for live cell-imaging.. J Mater Chem B.
Schoen JM, Neelakantan A, Cushman SA, Dutta T, Habib B, Jhala YV, Mondal I, Ramakrishnan U, P Reddy A, Saini S et al..  2022.  Synthesizing habitat connectivity analyses of a globally important human-dominated tiger-conservation landscape.. Conserv Biol.
Marathe K, Sanap R, Joglekar A, Caleb JTD, Maddison WP.  2022.  Three new and notes on two other jumping spider species of the genus Stenaelurillus Simon, 1886 (Salticidae: Aelurillina) from the Deccan Plateau, India.. Zootaxa. 5125(1):1-19.
Khandekar A, Thackeray T, Agarwal I.  2022.  Three new cryptic species of South Asian Cnemaspis Strauch, 1887 (Squamata, Gekkonidae) from Karnataka, India. VERTEBRATE ZOOLOGY . 72:115-142.
Singh A, Kandi AReddy, Jayaprakashappa D, Thuery G, Purohit DJ, Huelsmeier J, Singh R, Pothapragada SShruti, Ramaswami M, Bakthavachalu B.  2022.  The Transcriptional Response to Oxidative Stress is Independent of Stress-Granule Formation.. Mol Biol Cell. :mbcE21080418.
Dhanya SKumari, Hasan G.  2022.  Two photon imaging of calcium responses in murine Purkinje neurons.. STAR Protoc. 3(1):101105.
Mukherjee S, Shelar B, Krishna S.  2022.  Versatile role of miR-24/24-1*/24-2*expression in cancer and other human diseases. AMERICAN JOURNAL OF TRANSLATIONAL RESEARCH . 14(1):20-54.
2021
Prakash D, Ms A, Radhika B, Venkatesan R, Chalasani SH, Singh V.  2021.  1-Undecene from Pseudomonas aeruginosa is an olfactory signal for flight-or-fight response in Caenorhabditis elegans.. EMBO J. :e106938.
Young A.M., Brockmann A, Dyer F.C..  2021.  Adaptive tuning of the exploitation-exploration trade-off in four honey bee species. Behavioral Ecology and Sociobiology. 75(20)
Sarkar D, Shariq M, Dwivedi D, Krishnan N, Naumann R, Bhalla USingh, Ghosh HS.  2021.  Adult brain neurons require continual expression of the schizophrenia-risk gene Tcf4 for structural and functional integrity.. Transl Psychiatry. 11(1):494.
Shariq M, Sahasrabuddhe V, Krishna S, Radha S, Bellampalli R, Dwivedi A, Cheramangalam R, Reizis B, Hébert J, Ghosh HS.  2021.  Adult neural stem cells have latent inflammatory potential that is kept suppressed by to facilitate adult neurogenesis.. Sci Adv. 7(21)
Subhash N, Sundaramurthy V.  2021.  Advances in host-based screening for compounds with intracellular anti-mycobacterial activity.. Cell Microbiol. :e13337.
Nasrallah C, Cannone G, Briot J, Rottier K, Berizzi AE, Huang C-Y, Quast RB, Hoh F, Banères J-L, Malhaire F et al..  2021.  Agonists and allosteric modulators promote signaling from different metabotropic glutamate receptor 5 conformations.. Cell Rep. 36(9):109648.
Singh A, Thakur NL.  2021.  Allelopathic interaction among rocky intertidal invertebrates: sponge Cinachyrella cf. cavernosa and Zooxanthellate zoanthids Zoanthus sansibaricus. Hydrobiologia.
Hao N, Agnew D, Krishna S, Dodd IB, Shearwin KE.  2021.  Analysis of Infection Time Courses Shows CII Levels Determine the Frequency of Lysogeny in Phage 186.. Pharmaceuticals (Basel). 14(10)
Agarwal I, Thackeray T, Khandekar A.  2021.  Anew medium-sized rupicolous Cnemaspis Strauch, 1887 (Squamata: Gekkonidae) of the C. bangara clade from granite boulder habitats in Krishnagiri, Tamil Nadu, India. ZOOTAXA. 4969(4969):351-366.
Singh A, Hulsmeier J, Kandi AReddy, Pothapragada SShruti, Hillebrand J, Petrauskas A, Agrawal K, Rt K, Thiagarajan D, Jayaprakashappa D et al..  2021.  Antagonistic roles for Ataxin-2 structured and disordered domains in RNP condensation.. Elife. 10
Juma M, Sankaradoss A, Ndombi R, Mwaura P, Damoda T, Nazir J, Pandit A, Khurana R, Masika M, Chirchir R et al..  2021.  Antimicrobial Resistance Profiling and Phylogenetic Analysis of Neisseria gonorrhoeae Clinical Isolates From Kenya in a Resource-Limited Setting. Front. Microbiol.
Bhatia S, Narayanan N, Nagpal S, Nair DT.  2021.  Antiviral therapeutics directed against RNA dependent RNA polymerases from positive-sense viruses.. Mol Aspects Med. :101005.
Menon T, Shahabuddin G(.  2021.  Assessing woodpeckers as indicators of bird diversity and habitat structure in managed forests. BIODIVERSITY AND CONSERVATION.
Chandrasekaran A, Dittlau KStoklund, Corsi GI, Haukedal H, Doncheva NT, Ramakrishna S, Ambardar S, Salcedo C, Schmidt SI, Zhang Y et al..  2021.  Astrocytic reactivity triggered by defective autophagy and metabolic failure causes neurotoxicity in frontotemporal dementia type 3.. Stem Cell Reports. 16(11):2736-2751.
Ramakrishnan U.  2021.  At the crossroads: molecular ecology and wildlife conservation.. J Indian Inst Sci. :1-2.
Rajus S, Bhagavan SG, Kharva H, Rao S, Olsson SB.  2021.  Behavioral Ecology of the Coffee White Stem Borer: Toward Ecology-Based Pest Management of India's Coffee Plantations. FRONTIERS IN ECOLOGY AND EVOLUTION. 9(607555)
Das A, Vishvakarma V, Dey A, Dey S, Gupta A, Das M, Vishwakarma KKant, Roy DSaha, Yadav S, Kesarwani S et al..  2021.  Biophysical Properties of the Isolated Spike Protein Binding Helix of Human ACE2.. Biophys J.
Samhita L.  2021.  The Boggarts of biology: how non-genetic changes influence the genotype.. Curr Genet. 67(1):65-77.
Spedding M, Chattarji S, Spedding C, Jay TM.  2021.  Brain circuits at risk in psychiatric diseases and pharmacological pathways.. Therapie. 76(2):75-86.
Moreno-Layseca P, Jäntti NZ, Godbole R, Sommer C, Jacquemet G, Al-Akhrass H, Conway JRW, Kronqvist P, Kallionpää RE, Oliveira-Ferrer L et al..  2021.  Cargo-specific recruitment in clathrin- and dynamin-independent endocytosis.. Nat Cell Biol.
Nayim P, Mbaveng AT, Sanjukta M, Rikesh J, Kuete V, Krishna S.  2021.  CD24 gene inhibition and TIMP-4 gene upregulation by Imperata cylindrica's root extract prevents metastasis of CaSki cells via inhibiting PI3K/Akt/snail signaling pathway and blocking EMT. J Ethnopharmacol.
Jana SChandra.  2021.  Centrosome structure and biogenesis: Variations on a theme? Semin Cell Dev Biol.
Arumugam S, Schmieder S, Pezeshkian W, Becken U, Wunder C, Chinnapen D, Ipsen JHjort, Kenworthy AK, Lencer W, Mayor S et al..  2021.  Ceramide structure dictates glycosphingolipid nanodomain assembly and function.. Nat Commun. 12(1):3675.
Nishad S, Chauhan PKumar, Sowdhamini R, Ghosh A.  2021.  Chronic exposure of humans to high level natural background radiation leads to robust expression of protective stress response proteins.. Sci Rep. 11(1):1777.
Brilot AF, Lyon SA, Zelter A, Viswanath S, Maxwell A, MacCoss MJ, Muller EJ, Sali A, Davis TN, Agard DA.  2021.  CM1-driven assembly and activation of yeast γ-tubulin small complex underlies microtubule nucleation. Elife. 10
Bardgett RD, Bullock JM, Lavorel S, Manning P, Schaffner U, Ostle N, Chomel M, Durigan G, Fry EL, Johnson D et al..  2021.  Combatting global grassland degradation. NATURE REVIEWS EARTH & ENVIRONMENT.
Lakshmanan V, N ST, Bansal D, Padubidri SV, Palakodeti D, Krishna S.  2021.  Comprehensive annotation and characterization of planarian tRNA and tRNA-derived fragments (tRFs).. RNA.
Gupta A, Sabarinathan R, Bala P, Donipadi V, Vashisht D, Katika MRao, Kandakatla M, Mitra D, Dalal A, Bashyam MDharan.  2021.  A comprehensive profile of genomic variations in the SARS-CoV-2 isolates from the state of Telangana, India.. J Gen Virol.
Pulikkottil VVarghese, Somashekar BPriya, Bhalla US.  2021.  Computation, wiring, and plasticity in synaptic clusters.. Curr Opin Neurobiol. 70:101-112.
Khan A, Tyagi A.  2021.  Considerations for Initiating a Wildlife Genomics Research Project in South and South-East Asia. JOURNAL OF THE INDIAN INSTITUTE OF SCIENCE.
Joseph AM, Daw S, Sadhir I, Badrinarayanan A.  2021.  Coordination between nucleotide excision repair and specialized polymerase DnaE2 action enables DNA damage survival in non-replicating bacteria. Elife.
Fernandes G, Mishra PK, Nawaz MSarfaraz, Donlin-Asp PG, Rahman MMostafizur, Hazra A, Kedia S, Kayenaat A, Songara D, Wyllie DJA et al..  2021.  Correction of amygdalar dysfunction in a rat model of fragile X syndrome. Cell Reports. 37:109805.
Jambor H, Antonietti A, Alicea B, Audisio TL, Auer S, Bhardwaj V, Burgess SJ, Ferling I, Gazda MAnna, Hoeppner LH et al..  2021.  Creating clear and informative image-based figures for scientific publications.. PLoS Biol. 19(3):e3001161.
Sreeraj VS, Puzhakkal JC, Holla B, Nadella RKumar, Sheth S, Balachander S, Ithal D, Ali F, Viswanath B, Muralidharan K et al..  2021.  Cross-diagnostic evaluation of minor physical anomalies in psychiatric disorders.. J Psychiatr Res. 142:54-62.
Huelsmeier J, Walker E, Bakthavachalu B, Ramaswami M.  2021.  A C-terminal ataxin-2 disordered region promotes Huntingtin protein aggregation and neurodegeneration in Drosophila models of Huntington's disease.. G3 (Bethesda).

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