Author Title Type [ Year(Asc)]
2024
Bohra D, Islam Z, Nidharshan S, Mazumder A, Notani D.  2024.  Acute Activation of Genes Through Transcriptional Condensates Impact Non-target Genes in a Chromatin Domain. eLife.
Vaishnav MS, Kumari N, Srikanta S, Simha V, Krishnaswamy PR, Balaram P, Bhat N.  2024.  Albumin Oxidation and Albumin Glycation Discordance During Type 2 Diabetes Therapy: Biological and Clinical Implications.. Metab Syndr Relat Disord. 22(5):372-384.
Viswanath S.  2024.  AlphaFold opens the doors to deorphanizing secreted proteins.. Cell Syst. 15(11):1000-1001.
Jhaveri R, Cannanbilla L, Bhat KSArpitha, Sankaran M, Krishnadas M.  2024.  Anatomical traits explain drought response of seedlings from wet tropical forests.. Ecol Evol. 14(9):e70155.
Rathod SG, Singh A, Mantri VA.  2024.  Ascertaining the spatiotemporal variations in seaweed assemblages associated with the endemic seaweed Ulva ovata along selected locations of the Gulf of Khambhat, India. AQUATIC ECOLOGY.
Collins DM, Janardan V, Barneda D, Anderson KE, Niewczas I, Taylor D, Qiu D, Jessen HJ, Lopez-Clavijo AF, Walker S et al..  2024.  CDS2 expression regulates de novo phosphatidic acid synthesis.. Biochem J. 481(20):1449-1473.
Sreepadmanabh M, Ganesh M, Sanjenbam P, Kurzthaler C, Agashe D, Bhattacharjee T.  2024.  Cell shape affects bacterial colony growth under physical confinement.. Nat Commun. 15(1):9561.
Raghu P, Sharma Y, Devi ABhuvanendr, Krishnan H.  2024.  Challenges and opportunities for discovering the biology of rare genetic diseases of the brain.. J Biosci. 49
Zhang C, Joseph AMary, Casini L, Collier J, Badrinarayanan A, Manley S.  2024.  Chromosome organization shapes replisome dynamics in Caulobacter crescentus.. Nat Commun. 15(1):3460.
Carvalho APaula S, Owens HL, St Laurent RA, Earl C, Dexter KM, Messcher RL, Willmott KR, Aduse-Poku K, Collins SC, Homziak NT et al..  2024.  Comprehensive phylogeny of Pieridae butterflies reveals strong correlation between diversification and temperature.. iScience. 27(4):109336.
Nayak S, Regati DReddy, Sowdhamini R.  2024.  Computational analysis of human gut microbial prolyl oligopeptidases (POPs) reveal candidate genes as therapeutics for celiac disease.. Sci Rep. 14(1):19641.
Sharma A, Chandrashekar CR, Krishna S, Sowdhamini R.  2024.  Computational Analysis of the Accumulation of Mutations in Therapeutically Important RNA Viral Proteins During Pandemics with Special Emphasis on SARS-CoV-2.. J Mol Biol. 436(19):168716.
Torta F, Hoffmann N, Burla B, Alecu I, Arita M, Bamba T, Bennett SAL, Bertrand-Michel J, Brügger B, Cala MP et al..  2024.  Concordant inter-laboratory derived concentrations of ceramides in human plasma reference materials via authentic standards.. Nat Commun. 15(1):8562.
Singh A, Thutupalli S, Kumar M, Ameta S.  2024.  Constrained dynamics of DNA oligonucleotides in phase-separated droplets.. Biophys J.
Thutupalli S.  2024.  The cost of cellular patterns. Nature Physics. 20:1704–1705.
Hussain N, Apotikar A, Pidathala S, Mukherjee S, Burada AP, Sikdar SK, Vinothkumar KR, Penmatsa A.  2024.  Cryo-EM structures of pannexin 1 and 3 reveal differences among pannexin isoforms.. Nat Commun. 15:2942.
Narah J, Streinzer M, Chakravorty J, Megu K, Spaethe J, Brockmann A, Schmitt T.  2024.  Cuticular Hydrocarbon Profiles of Himalayan Bumble Bees (Hymenoptera: Bombus Latreille) are Species-Specific and Show Elevational Variation.. J Chem Ecol.
Sreepadmanabh M, Arun AB, Bhattacharjee T.  2024.  Design approaches for 3D cell culture and 3D bioprinting platforms.. Biophys Rev (Melville). 5(2):021304.
Sawant D, Joshi S, Pawar U, Naik P, Khan F, Nawge V, Kunte K.  2024.  Devadatta adii sp. nov. (Odonata: Zygoptera: Devadattidae) from Upper Siang District, Arunachal Pradesh, India. ZOOTAXA. 5519(4):571-589.
Kumar S, Ghosh S, Shanavas N, Sivaramakrishnan V, Dwari M, Das S.  2024.  Development of pial collaterals by extension of pre-existing artery tips.. Cell Rep. 43(10):114771.
Mishra S, Bansal M, Prasad V, Singh VPartap, Murthy S, Parmar S, Utescher T, Khangar R.  2024.  Did the Deccan Volcanism impact the Indian flora during the Maastrichtian? EARTH-SCIENCE REVIEWS. 258(104950)
Rana D, Sartor CC, Chiaverini L, Cushman SA, Kaszta Z, Ramakrishnan U., Macdonald DW.  2024.  Differentially biased sampling strategies reveal the non-stationarity of species distribution models for Indian small felids. ECOLOGICAL MODELLING. 493
Agrawal K, Prabhakar S, Bakthavachalu B, Chaturvedi D.  2024.  Distinct developmental patterns in Anopheles stephensi organ systems.. Dev Biol. 508:107-122.
Sanjenbam P, Agashe D.  2024.  Divergence and convergence in epiphytic and endophytic phyllosphere bacterial communities of rice landraces.. mSphere. :e0076524.
Khan A, Sil M, Thekaekara T, Garg KM, Sinha I, Khurana R, Sukumar R, Ramakrishnan U.  2024.  Divergence and serial colonization shape genetic variation and define conservation units in Asian elephants.. Curr Biol.
Todisco V, Basu DNath, Prosser SWJ, Russell S, Mutanen M, Zilli A, Huertas B, Kunte K, Vane-Wright R.  2024.  DNA barcodes from over-a-century-old type specimens shed light on the taxonomy of a group of rare butterflies (Lepidoptera: Nymphalidae: Calinaginae).. PLoS One. 19(7):e0305825.
Theeyancheri L, Chaki S, Bhattacharjee T, Chakrabarti R.  2024.  Dynamic clustering of active rings. Phys. Rev. Research. 6(L012038 )
Rajput V, Das R, Pramanik R, Nannaware K, Sushma Y, Taji N, Rajput V, Rajkhowa R, Pacharne P, Shah P et al..  2024.  Early Detection of KP.2 SARS-CoV-2 Variant using Wastewater-based Genomic Surveillance in Pune, Maharashtra, India.. J Travel Med.
Kaur K, Chandel M, Munikrishnappa VKT, Kumar P, Sahu BK, Ahamed M, Manjunath S, Gorantla M, Olsson S, Muthusamy E et al..  2024.  Ecofriendly agriculture pest control using pheromone packed programed nanovolcanoes framed by graphene oxide. CLEAN TECHNOLOGIES AND ENVIRONMENTAL POLICY.
Kumar M, Murali A, Subramaniam AGopal, Singh R, Thutupalli S.  2024.  Emergent dynamics due to chemo-hydrodynamic self-interactions in active polymers.. Nat Commun. 15(1):4903.
Simões deOliveira L, O'Leary HE, Nawaz S, Loureiro R, Davenport EC, Baxter P, , Dando O, Perkins E, Peltier J et al..  2024.  Enhanced hippocampal LTP but normal NMDA receptor and AMPA receptor function in a rat model of CDKL5 deficiency disorder.. Mol Autism.. 15(1):28.
Chaturvedi N, Chatterjee P.  2024.  Evolutionary Adaptation in Heterogeneous and Changing Environments.. Evolution.
Jean-François F, Pratibha S, Stéphane F, Enisa A, Fabrice N, Bernard M, Deepa A, Claude E.  2024.  Experimental Evolution Induced by Maternal Post-copulatory Factors in Drosophila.. Behav Genet.
Maes S.L, Perring M.P, Cohen R., Akinnifesi F.K, Bargues-Tobella A., Bastin J.-f., Bauters M., Bernardino P.N, Brancalion P.HS, Bullock J.M et al..  2024.  Explore before you restore: Incorporating complex systems thinking in ecosystem restoration. JOURNAL OF APPLIED ECOLOGY .
Premageetha GThambraRaj, Vinothkumar KR, Bose S.  2024.  Exploring advances in single particle CryoEM with apoferritin: From blobs to true atomic resolution.. Int J Biochem Cell Biol. 169:106536.
Neethu K.C, Pushpadass HA, Franklin MEE, Krishnamurthy H..  2024.  Exploring oil absorption and distribution in immersion-fried pantoa (Indian dairy dessert): effects of frying media. Journal of Food Science and Technology.
Yadav S, Vinothkumar KR.  2024.  Factors affecting macromolecule orientations in thin films formed in cryo-EM.. Acta Crystallogr D Struct Biol. 80(Pt 7):535-550.
Chaba Z, Jain I, Tran PT.  2024.  Fission yeast spindle dynamics and chromosome segregation fidelity show distinct thermosensitivity.. MicroPubl Biol. 2024
Benitez LM, Parr CL, Sankaran M, Ryan CM.  2024.  Fragmentation in patchy ecosystems: a call for a functional approach.. Trends Ecol Evol.
Gupta D, Sane SP, Arakeri JH.  2024.  Generating controlled gust perturbations using vortex rings.. PLoS One. 19(7):e0305084.
Mishra S., Manohar V., Chandel S., Manoj T., Bhattacharya S., Hegde N., Nath V.R., Krishnan H., Wendling C., Mattia T.D. et al..  2024.  A genetic screen to uncover mechanisms underlying lipid transfer protein function at membrane contact sites . Life Sci Alliance. 7(6):e202302525.
Panda S, Anandan A, K Shafi M, Naika MBN, Sowdhamini R, Vanishree G, Sarkar S, Travis AJ, Norton GJ, Price AH.  2024.  Genome-wide association study reveals effect of nsSNPs on candidate genes in rice during iron deficiency.. Funct Integr Genomics. 24(6):198.
Raju A, Siggia ED.  2024.  A geometrical model of cell fate specification in the mouse blastocyst.. Development. 151(8)
Marathe K, Maddison WP, Kunte K.  2024.  Ghatippuspaschima, a new species and genus of plexippine jumping spider from the Western Ghats of India (Salticidae, Plexippini, Plexippina).. Zookeys. 1191:89-103.
Tanaka S, Matsushita Y, Hanaki Y, Higaki T, Kamamoto N, Matsushita K, Higashiyama T, Fujimoto K, Ueda M.  2024.  HD-ZIP IV genes are essential for embryo initial cell polarization and the radial axis formation in Arabidopsis.. Curr Biol.
Dua N, Badrinarayanan A.  2024.  Heteroplasmy in action: tracking mtDNA segregation dynamics.. EMBO J.
Sundaramurthy V, Haldar J.  2024.  Honoring a Legacy: "Vigyan Ratna" Prof. G. Padmanaban.. ACS Infect Dis.
Chakrabarti S.  2024.  Identifying memory genes in cancer drug tolerance.. Nat Rev Cancer.
Werner S, Okenve-Ramos P, Hehlert P, Zitouni S, Priya P, Mendonça S, Sporbert A, Spalthoff C, Göpfert MC, Jana SChandra et al..  2024.  IFT88 maintains sensory function by localising signalling proteins along cilia.. Life Sci Alliance. 7(5)
Asokan MS, Joan RFlorina, Babji S, Dayma G, Nadukkandy P, Subrahmanyam V, Pandey A, Malagi G, Arya P, Mahajan V et al..  2024.  Immunogenicity of SARS-CoV-2 vaccines BBV152 (COVAXIN®) and ChAdOx1 nCoV-19 (COVISHIELD™) in seronegative and seropositive individuals in India: a multicentre, nonrandomised observational study.. Lancet Reg Health Southeast Asia. 22:100361.
Sabarinathan R.  2024.  Immunoproteasome as a biomarker for immunotherapy.. Nat Rev Cancer.
Saha S, Krishnan H, Raghu P.  2024.  IMPA1 dependent regulation of phosphatidylinositol 4,5-bisphosphate and calcium signalling by lithium.. Life Sci Alliance. 7(2):e202302425.
Jain H, Ghosh S.  2024.  Imprinting reversible deformations on a compressed soft rod network. SOFT MATTER. 20(26)
Treidel LA, Deem KD, Salcedo MK, Dickinson MH, Bruce HS, Darveau C-A, Dickerson BH, Ellers O, Glass JR, Gordon CM et al..  2024.  Insect Flight: State of the Field and Future Directions.. Integr Comp Biol.
Liu X, Zhang Y, Wen Z, Hao Y, Banks CAS, Cesare J, Bhattacharya S, Arvindekar S, Lange JJ, Xie Y et al..  2024.  An integrated structural model of the DNA damage-responsive H3K4me3 binding WDR76:SPIN1 complex with the nucleosome.. Proc Natl Acad Sci U S A. 121(33):e2318601121.
Parvathy J, Yazhini A, Srinivasan N, Sowdhamini R.  2024.  Interfacial residues in protein-protein complexes are in the eyes of the beholder.. Proteins.
Dewan A, Jain C, Das M, Tripathi A, Sharma AKumar, Singh H, Malhotra N, Seshasayee ASai Narain, Chakrapani H, Singh A.  2024.  Intracellular peroxynitrite perturbs redox balance, bioenergetics, and Fe-S cluster homeostasis in Mycobacterium tuberculosis.. Redox Biol. 75:103285.
Hasan G.  2024.  IPRs and nSOCE-Tied Together at Two Ends.. Contact (Thousand Oaks). 7:25152564241231092.
Lu H, Twan WKyaw, Ikawa Y, Khare V, Mukherjee I, Schou KBødtker, Chua KXin, Aqasha A, Chakrabarti S, Hamada H et al..  2024.  Localisation and function of key axonemal microtubule inner proteins and dynein docking complex members reveal extensive diversity among vertebrate motile cilia.. Development. 151(14)
Varma A, Udupa S, Sengupta M, Ghosh PKumar, Thirumalai V.  2024.  A machine-learning tool to identify bistable states from calcium imaging data.. J Physiol.
Viswan NAnn, Tribut A, Gasparyan M, Radulescu O, Bhalla US.  2024.  Mathematical basis and toolchain for hierarchical optimization of biochemical networks.. PLoS Comput Biol. 20(12):e1012624.
Jha S, Bose S, Vinothkumar KR.  2024.  Modeling Ligands into Maps Derived from Electron Cryomicroscopy.. J Vis Exp. (209)
Pasani S, Menon KS, Viswanath S.  2024.  The molecular architecture of the desmosomal outer dense plaque by integrative structural modeling.. Protein Sci. 33(12):e5217.
Chaitanya P, Vijayaraghavareddy P, Lekshmy S, Spoorthi N, Math RGH, Shinde DD, Struik PC, Sreeman S.  2024.  Molecular basis of distinct responses to drought between rice and wheat genotypes. Environmental and Experimental Botany. 221:105734.
Srivastava V, Patra K, Pai H, Aguilar-Pontes MVictoria, Berasategui A, Kamble A, Di Pietro A, Redkar A.  2024.  Molecular Dialogue During Host Manipulation by the Vascular Wilt Fungus .. Annu Rev Phytopathol. 62(1):97-126.
Pramanik R, Nannaware K, Malik V, Shah P, Sangewar P, Gogate N, Shashidhara LS, Boargaonkar R, Patil D, Kale S et al..  2024.  Monitoring Influenza A (H1N1, H3N2), RSV, and SARS-CoV-2 Using Wastewater-Based Epidemiology: A 2-Year Longitudinal Study in an Indian Megacity Covering Omicron and Post-Omicron Phases.. Food Environ Virol. 17(1):3.
Singh N, Kaushik R, Prakash A, Saini SSingh, Garg S, Adhikary A, Ladher RK.  2024.  Mosaic Atoh1 deletion in the chick auditory epithelium reveals a homeostatic mechanism to restore hair cell number.. Dev Biol. 516:35-46.
Prusty AD, Sane SP.  2024.  The motor apparatus of head movements in the Oleander hawkmoth (Daphnis nerii, Lepidoptera).. J Comp Neurol. 532(1):e25577.
Sane SP, Wehling R, Daniel T.  2024.  Multisensory integration in insect flight control.. Biol Lett. 20(1):20230565.
Garushyants SK, Sane M, Selifanova MV, Agashe D, Bazykin GA, Gelfand MS.  2024.  Mutational signatures in wild type Escherichia coli strains reveal predominance of DNA polymerase errors.. Genome Biol Evol.
Lingamallu SManoz, Deshpande A, Joy N, Ganeshan K, Ray N, Ladher RKumar, Taketo MMark, Lafkas D, Guha A.  2024.  Neuroepithelial bodies and terminal bronchioles are niches for distinctive club cells that repair the airways following acute notch inhibition.. Cell Rep. 43(9):114654.
Sondhi S, Efetov KA, Tarmann GM, Karmakar T, Pawar U, Kunte K.  2024.  A new species of Piarosoma Hampson, 1893 (Lepidoptera, Zygaenidae, Procridinae, Artonini) from Arunachal Pradesh, India.. Zootaxa. 5270(1):139-145.
Kunte K, Sengupta A, Pawar U, Nawge V.  2024.  A new species of silverline butterfly, Cigaritis Donzel, 1847 (Lepidoptera: Lycaenidae), from the Western Ghats biodiversity hotspot, India.. Zootaxa. 5399(1):85-95.
Subhadarshini S, Tandon H, Srinivasan N, Sowdhamini R.  2024.  Normal Mode Analysis Elicits Conformational Shifts in Proteins at Both Proximal and Distal Regions to the Phosphosite Stemming from Single-Site Phosphorylation.. ACS Omega. 9(23):24520-24537.
Arvindekar S, Pathak AS, Majila K, Viswanath S.  2024.  Optimizing representations for integrative structural modeling using Bayesian model selection.. Bioinformatics. 40(3)
Mitra R, Richhariya S, Hasan G.  2024.  Orai-mediated calcium entry determines activity of central dopaminergic neurons by regulation of gene expression.. Elife. 12
Gowda A, C ST, Anil VS, Raghavan S.  2024.  Phytosynthesis of silver nanoparticles using aqueous sandalwood (Santalum album L.) leaf extract: Divergent effects of SW-AgNPs on proliferating plant and cancer cells.. PLoS One. 19(4):e0300115.
G Sundar VHari, Madhu A, Archana A, Shivaprasad PV.  2024.  Plant histone variants at the nexus of chromatin readouts, stress and development.. Biochim Biophys Acta Gen Subj. 1868(2):130539.
Negi H, Ravichandran A, Dasgupta P, Reddy S, Das R.  2024.  Plasticity of the proteasome-targeting signal Fat10 enhances substrate degradation.. Elife. 13
Narayanan S, Varma A, Thirumalai V.  2024.  Predictive neural computations in the cerebellum contribute to motor planning and faster behavioral responses in larval zebrafish.. Sci Adv. 10(1):eadi6470.
Ganguly D, Srivathsa A.  2024.  Ratel Mellivora capensis in a human-dominated savanna landscape in Kachchh, Gujarat, India. Small Carnivore Conservation. 62
Chawla S, Oster H, Duffield GE, Maronde E, Guido ME, Chabot C, Dkhissi-Benyahya O, Provencio I, Goel N, Youngstedt SD et al..  2024.  Reflections on Several Landmark Advances in Circadian Biology.. J Circadian Rhythms. 22:1.
Tolgyesi C, Helm A, Ratnam J, Silveira FAO, Torok P.  2024.  Restoration of open ecosystems in the face of climate change. GLOBAL ECOLOGY AND CONSERVATION. 53(e02989)
Subramaniam AGopal, Kumar M, Thutupalli S, Singh R.  2024.  Rigid flocks, undulatory gaits, and chiral foldamers in a chemically active polymer. NEW JOURNAL OF PHYSICS. 26(8)
Soota D, Saravanan B, Mann R, Kharbanda T, Notani D.  2024.  RNA fine-tunes estrogen receptor-alpha binding on low-affinity DNA motifs for transcriptional regulation.. EMBO J.
Tyagi A, Yadav N, Pandit A, Ramakrishnan U.  2024.  On the road to losing connectivity: Faecal samples provide genome-wide insights into anthropogenic impacts on two large herbivore species in central India.. Mol Ecol. :e17461.
Himeoka Y, Kirkegaard JB, Mitarai N, Krishna S.  2024.  Roles of network topology in the relaxation dynamics of simple chemical reaction network models.. Sci Rep. 14(1):22187.
Issar S, Leroy C, d'Ettorre P, Kilner RM.  2024.  Seasonal Patterns of Resource Use Within Natural Populations of Burying Beetles.. Ecol Evol. 14(10):e70429.
Krishnan S, Karpe SDilip, Kumar H, Nongbri LB, Venkateswaran V, Sowdhamini R, Grosse-Wilde E, Hansson BS, Borges RM.  2024.  Sensing volatiles throughout the body: geographic- and tissue-specific olfactory receptor expression in the fig wasp.. Insect Sci.
Kamble A, Michavila S, Gimenez-Ibanez S, Redkar A.  2024.  Shared infection strategy of a fungal pathogen across diverse lineages of land plants, the Fusarium example.. Curr Opin Plant Biol. 77:102498.
Chaurasia R, Ayajuddin M, Ratnaparkhi GS, Lingadahalli SS, Yenisetti SC.  2024.  A Simple Immunofluorescence Method to Characterize Neurodegeneration and Tyrosine Hydroxylase Reduction in Whole Brain of a Model of Parkinson's Disease.. Bio Protoc. 14(4):e4937.
Ghosh-Harihar M, Yadav N, Gurung N, Darshan C.S, Shashikumar B., Vishnudas C.K, Prakash V, Green RE, Ramakrishnan U.  2024.  Spatial patterns in the diet of Gyps vultures in India and their implications for conservation. BIOLOGICAL CONSERVATION. 292(110551)
Mohanakrishnan V, Sivaraj KK, Jeong H-W, Bovay E, Dharmalingam B, M Bixel G, Dinh VVuong, Petkova M, Ugarte IParedes, Kuo Y-T et al..  2024.  Specialized post-arterial capillaries facilitate adult bone remodelling.. Nat Cell Biol.
Verma S, Menon R, Sowdhamini R.  2024.  Structural insights into the role of deleterious mutations at the dimeric interface of Toll-like receptor interferon-β related adaptor protein.. Proteins.
Petrauskas A., Fortunati DL, Kandi AR, Pothapragada SS, Agrawal K., Singh A., Huelsmeier J., Hillebrand J., Brown G., Chaturvedi D. et al..  2024.  Structured and disordered regions of Ataxin-2 contribute differently to the specificity and efficiency of mRNP granule formation. PLoS Genetics. 20(20):e1011251.
Marathe K, Caleb JTD, Maddison WP, Nisha BG, Maliye CC, Lohit YT, Kunte K.  2024.  Tenkana,, a new genus of jumping spiders (Salticidae, Plexippina) from South Asia, with the new Indian species .. Zookeys. 1215:91-106.
Ravichandran A, Das R.  2024.  The Thermodynamic Properties of Fat10ylated Proteins Are Regulated by the Fat10ylation Site. ACS OMEGA. 9(20):22265-22276.
Chawla S, O'Neill J, Knight MI, He Y, Wang L, Maronde E, Rodríguez SGil, van Ooijen G, Garbarino-Pico E, Wolf E et al..  2024.  Timely Questions Emerging in Chronobiology: The Circadian Clock Keeps on Ticking.. J Circadian Rhythms. 22:2.
Mahadevan C, K Shafi M, Nagarathnam B, Sakuntala M, Sowdhamini R.  2024.  Transcriptional regulation of hormone signalling genes in black pepper in response to Phytophthora capsici.. BMC Genomics. 25(1):910.
K BKumar A, George EAntony, Brockmann A.  2024.  Tropical and montane Apis cerana show distinct dance-distance calibration curves.. J Exp Biol.

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