Author Title Type [ Year(Asc)]
Islam Z, Saravanan B, Walavalkar K, Farooq U, Singh AKumar, Sabarinathan R, Thakur J, Pandit A, Henikoff S, Notani D.  2023.  Active enhancers strengthen insulation by RNA-mediated CTCF binding at chromatin domain boundaries.. Genome Res.
Sharma SDas, Reddy BKumar, Pal R, Ritakari TE, Cooper JD, Selvaraj BT, Kind PC, Chandran S, Wyllie DJA, Chattarji S.  2023.  Astrocytes mediate cell non-autonomous correction of aberrant firing in human FXS neurons.. Cell Rep. 42(4):112344.
Nair A, Harshith CYY, Narjala A, Shivaprasad PV.  2023.  Begomoviral beta C1 orchestrates organellar genomic instability to augment viral infection. PLANT JOURNAL .
Nair A, Harshith CY, Narjala A, Shivaprasad PV.  2023.  Begomoviral βC1 orchestrates organellar genomic instability to augment viral infection.. Plant J.
Choo BPeide, Mok Y, Oh HChoon, Patanaik A, Kishan K, Awasthi A, Biju S, Bhattacharjee S, Poh Y, Wong HSiang.  2023.  Benchmarking performance of an automatic polysomnography scoring system in a population with suspected sleep disorders.. Front Neurol. 14:1123935.
Sharma A, Krishna S, Sowdhamini R.  2023.  Bioinformatics analysis of mutations sheds light on the evolution of Dengue NS1 protein with implications in the identification of potential functional and druggable sites.. Mol Biol Evol.
Sanz-Paz M, van Zanten TS, Manzo C, Mivelle M, Garcia-Parajo MF.  2023.  Broadband Plasmonic Nanoantennas for Multi-Color Nanoscale Dynamics in Living Cells.. Small. :e2207977.
Patel FDivan, Pinto W, Dey M, Alcoverro T, Arthur R.  2023.  Carbonate budgets in Lakshadweep Archipelago bear the signature of local impacts and global climate disturbances. CORAL REEFS .
Iyer KS, Prabhakara C, Mayor S, Rao M.  2023.  Cellular compartmentalisation and receptor promiscuity as a strategy for accurate and robust inference of position during morphogenesis. . Elife. :12:e79257.
S IMeenakshi, Rao M, Mayor S, Sowdhamini R.  2023.  A census of actin-associated proteins in humans.. Front Cell Dev Biol. 11:1168050.
Khouzam RAbou, Sharda M, Rao SPrasad, Kyerewah-Kersi SMaame, Zeinelabdin NAhmed, Mahmood AShah, Nawafleh H, Khan MSamar, Venkatesh GHassan, Chouaib S.  2023.  Chronic hypoxia is associated with transcriptomic reprogramming and increased genomic instability in cancer cells.. Front Cell Dev Biol. 11:1095419.
Tyagi A, Godbole M, Vanak ATamim, Ramakrishnan U.  2023.  Citizen science facilitates first ever genetic detection of wolf-dog hybridization in Indian savannahs.. Ecol Evol. 13(5):e10100.
Condamine FL, Allio R, Reboud EL, Dupuis JR, Toussaint EFA, Mazet N, Hu S-J, Lewis DS, Kunte K, Cotton AM et al..  2023.  A comprehensive phylogeny and revised taxonomy illuminate the origin and diversification of the global radiation of Papilio (Lepidoptera: Papilionidae).. Mol Phylogenet Evol. 183:107758.
Chauhan PKumar, Sowdhamini R.  2023.  Computational analysis of the flexibility in the disordered linker region connecting LIM domains in cysteine-glycine-rich protein.. Front Genet. 14:1134509.
Asopa A, Bhalla US.  2023.  A computational view of short-term plasticity and its implications for E-I balance.. Curr Opin Neurobiol. 81:102729.
Jaganathan D, Rajakani R, Doddamani D, Saravanan D, Pulipati S, G VHari Sunda, Sellamuthu G, Jayabalan S, Kumari K, Parthasarathy P et al..  2023.  A conserved SNP variation in the pre-miR396c flanking region in Oryza sativa indica landraces correlates with mature miRNA abundance.. Sci Rep. 13(1):2195.
Vijayasarathy M, Kumar S, Venkatesha MA, Balaram P.  2023.  Contryphan sequence diversity: Messy N-terminus processing, effects on chromatographic behaviour and mass spectrometric fragmentation.. J Proteomics. :104805.
Srinivasachari S, Tiwari VR, Kharbanda T, Sowdamini R, Subramanian R.  2023.  A dimer between monomers and hexamers-Oligomeric variations in glucosamine-6-phosphate deaminase family.. PLoS One. 18(1):e0271654.
Venkatesan V, Christopher ACrystal, Rhiel M, Azhagiri MKumar K, Babu P, Walavalkar K, Saravanan B, Andrieux G, Rangaraj S, Srinivasan S et al..  2023.  Editing the core region in HPFH deletions alters fetal and adult globin expression for treatment of β-hemoglobinopathies.. Mol Ther Nucleic Acids. 32:671-688.
Mozaffer F, Cherian P, Krishna S, Wahl B, Menon GI.  2023.  Effect of hybrid immunity, school reopening, and the Omicron variant on trajectory of COVID-19 epidemic in India: A modelling study.. Lancet Reg Health Southeast Asia. :100095.
Anderson DM, Jayanthi LP, Gosavi S, Meiering EM.  2023.  Engineering the kinetic stability of a β-trefoil protein by tuning its topological complexity.. Front Mol Biosci. 10:1021733.
Daleo P, Alberti J, Chaneton EJ, Iribarne O, Tognetti PM, Bakker JD, Borer ET, Bruschetti M, MacDougall AS, Pascual J et al..  2023.  Environmental heterogeneity modulates the effect of plant diversity on the spatial variability of grassland biomass.. Nat Commun. 14(1):1809.
Chakraborty P, Hasan G.  2023.  ER-Ca2+ stores and the regulation of Store-operated Ca2+ Entry in neurons.. J Physiol.
Jagtap S, Pattabiraman C, Sankaradoss A, Krishna S, Roy R.  2023.  Evolutionary dynamics of dengue virus in India.. PLoS Pathog. 19(4):e1010862.
Dahal N, Romine MG, Khatiwara S, Ramakrishnan U, Lamichhaney S.  2023.  Gene flow drives genomic diversity in Asian Pikas distributed along the core and range-edge habitats in the Himalayas.. Ecol Evol. 13(5):e10129.
Gopurappilly R, Musthafa T, Sukumaran S, Viswanath B, Hasan G.  2023.  Generation of feeder-independent transgene-free iPSC lines from a young-onset Parkinson's disease (YOPD) patient with a homozygous PLA2G6: c.2222G>A (p. Arg741Gln) mutation (NCBSi003-A) and unaffected heterozygous parent (NCBSi004-A).. Stem Cell Res. 67:103033.
Raju A, Siggia ED.  2023.  A geometrical perspective on development.. Dev Growth Differ.
Kawahara AY, Storer C, Carvalho APaula S, Plotkin DM, Condamine FL, Braga MP, Ellis EA, St Laurent RA, Li X, Barve V et al..  2023.  A global phylogeny of butterflies reveals their evolutionary history, ancestral hosts and biogeographic origins.. Nat Ecol Evol.
Naik T, Sharda M, P LC, Virbhadra K, Pandit A.  2023.  High-quality single amplicon sequencing method for illumina MiSeq platform using pool of 'N' (0-10) spacer-linked target specific primers without PhiX spike-in.. BMC Genomics. 24(1):141.
Tripathi AMani, Singh R, Verma AKumar, Singh A, Mishra P, Dwivedi V, Narayan S, G Sundar VHari, Shirke PArvind, Shivaprasad PV et al..  2023.  Indian Himalayan natural Arabidopsis thaliana accessions with abolished miR158 levels exhibit robust miR173-initiated trans-acting cascade silencing.. Plant J.
Jeancolas C, Singh AY, Jain S, Krishna S, Nghe P.  2023.  An interdisciplinary effort to understand chemical organizations at the origin of life.. iScience. 26(1):105834.
Sabarees G., Gouthaman S., Alagarsamy V., Velmurugan V., V. Solomon R.  2023.  Isolation, Functionalization, In Silico Investigation, and Synthesis of 1,8-Cineole Analog as Antitubercular Agent Targeting InhA. Russian Journal of Bioorganic Chemistry.
Sreepadmanabh M, Ganesh M, Bhat R, Bhattacharjee T.  2023.  Jammed microgel growth medium prepared by flash-solidification of agarose for 3D cell culture and 3D bioprinting.. Biomed Mater.
Raval PK, Ngan WYui, Gallie J, Agashe D.  2023.  The layered costs and benefits of translational redundancy.. Elife. 12
Redkar A, Di Pietro A, Turrà D.  2023.  Live-Cell Visualization of Early Stages of Root Colonization by the Vascular Wilt Pathogen Fusarium oxysporum.. Methods Mol Biol. 2659:73-82.
Khattri M, Amako Y, Gibbs JR, Collura JL, Arora R, Harold A, Li MYen, Harms PW, Ezhkova E, Shuda M.  2023.  Methyltransferase-independent function of enhancer of zeste homologue 2 maintains tumorigenicity induced by human oncogenic papillomavirus and polyomavirus.. Tumour Virus Res. :200264.
Mam B, Karpe SD, Sowdhamini R.  2023.  Minus-C subfamily has diverged from Classic odorant-binding proteins in honeybees. APIDOLOGIE . 54(1):12.
Thattai M.  2023.  Molecular and cellular constraints on vesicle traffic evolution.. Curr Opin Cell Biol. 80:102151.
Ameta S, Kumar M, Chakraborty N, Matsubara YJ, S P, Gandavadi D, Thutupalli S.  2023.  Multispecies autocatalytic RNA reaction networks in coacervates.. Communications Chemistry. 6(1):91.
Mendon N, Ganie R, Kesarwani S, Dileep D, Sasi S, Lama P, Chandra A, Sirajuddin M.  2023.  Nanobody derived using a peptide epitope from the Spike protein receptor-binding motif inhibits entry of SARS-CoV-2 variants.. J Biol Chem. 299(1):102732.
Yan X, Kohli M, Wen Y, Wang X.  2023.  Nitrogen addition and warming modulate the pathogen impact on plant biomass by shifting intraspecific functional traits and reducing species richness. JOURNAL OF ECOLOGY . 111(2):509-524.
Dhall JKaur, Kasturacharya N, Pandit A, Cp L.  2023.  Optimized protocol for assay for transposase-accessible chromatin by sequencing (ATAC-seq) from Drosophila melanogaster brain tissue.. STAR Protoc. 4(2):102153.
Pörtner H-O, Scholes RJ, Arneth A, Barnes DKA, Burrows MT, Diamond SE, Duarte CM, Kiessling W, Leadley P, Managi S et al..  2023.  Overcoming the coupled climate and biodiversity crises and their societal impacts.. Science. 380(6642):eabl4881.
Jobin V, Das A, Harikrishnan CP, Chanda R, Lawrence S, Robin VV.  2023.  Patterns of understory invasion in invasive timber stands of a tropical sky island.. Ecol Evol. 13(4):e9995.
Banerjee A, Gosavi S.  2023.  Potential Self-Peptide Inhibitors of the SARS-CoV-2 Main Protease.. J Phys Chem B.
Srivathsa A, Vasudev D, Nair T, Chakrabarti S, Chanchani P, DeFries R, Deomurari A, Dutta S, Ghose D, Goswami VR et al..  2023.  Prioritizing India's landscapes for biodiversity, ecosystem services and human well-being. NATURE SUSTAINABILITY .
Kumar R, Dhaka B, Sahoo S, Jolly MKumar, Sabarinathan R.  2023.  Prognostic association of immunoproteasome expression in solid tumours is governed by the immediate immune environment.. Mol Oncol.
van Zanten T, Greeshma PS, Mayor S.  2023.  Quantitative fluorescence emission anisotropy microscopy for implementing homo-fluorescence resonance energy transfer measurements in living cells. Mol Biol Cell.. 34(6)
Gautam S, Mahapa A, Yeramala L, Gandhi A, Krishnan S, Vinothkumar KR, Chatterji D.  2023.  Regulatory mechanisms of c-di-AMP synthase (MsDisA) protein from Mycobacterium smegmatis revealed by a structure - function analysis.. Protein Sci. :e4568.
Jain I, Rao M, Tran PT.  2023.  Reliable and robust control of nucleus centering is contingent on nonequilibrium force patterns.. iScience. 26(5):106665.
Bellur A, Das S, Jayaraman V, Behera S, Suryavanshi A, Balasubramanian S, Balaram P, Jindal G, Balaram H.  2023.  Revisiting the Burden Borne by Fumarase: Enzymatic Hydration of an Olefin.. Biochemistry.
Puri M, Srivathsa A, Karanth KK, Patel I, N. Kumar S.  2023.  Safe space in the woods: Mechanistic spatial models for predicting risks of human-bear conflicts in India. BIOTROPICA . 55(2):504-516.
Lamba S, Ganesan S, Daroch N, Paul K, Joshi SGopal, Sreenivas D, Nataraj A, Srikantaiah V, Mishra R, Ramakrishnan U et al..  2023.  SARS-CoV-2 infection dynamics and genomic surveillance to detect variants in wastewater - a longitudinal study in Bengaluru, India.. Lancet Reg Health Southeast Asia. :100151.
Sane M, Diwan GD, Bhat BA, Wahl LM, Agashe D.  2023.  Shifts in mutation spectra enhance access to beneficial mutations.. Proc Natl Acad Sci U S A.. 120(22):e2207355120.
Kamat A, Badrinarayanan A.  2023.  SOS-independent bacterial DNA damage responses: diverse mechanisms, unifying function.. Curr Opin Microbiol. 73:102323.
Vinothkumar KR.  2023.  Structural heterogeneity of the Rieske iron-sulfur protein in a yeast complex III.. IUCrJ. 10(Pt 1):1-3.
Tiwari V, Sowdhamini R.  2023.  Structural modelling and dynamics of full-length of TLR10 sheds light on possible modes of dimerization, ligand binding and mechanism of action.. Curr Res Struct Biol. 5:100097.
Krishnan H, Basak B, Nath VR, Mishra S, Raghu P.  2023.  Structural organization of RDGB (retinal degeneration B), a multi-domain lipid transfer protein: a molecular modelling and simulation based approach.. J Biomol Struct Dyn. :1-15.
Bhattacharyya T, Ghosh A, Verma S, Raghu P, Sowdhamini R.  2023.  Structural rationale to understand the effect of disease-associated mutations on Myotubularin.. Curr Res Struct Biol. 5:100100.
Tiwari V, Sowdhamini R.  2023.  Structure modelling of odorant receptor from and identification of potential repellent molecules.. Comput Struct Biotechnol J. 21:2204-2214.
Ananthamurthy KG, Bhalla US.  2023.  Synthetic Data Resource and Benchmarks for Time Cell Analysis and Detection Algorithms.. eNeuro.
Basu DNath, Bhaumik V, Kunte K.  2023.  The tempo and mode of character evolution in the assembly of mimetic communities.. Proc Natl Acad Sci U S A. 120(1):e2203724120.
Wortel MT, Agashe D, Bailey SF, Bank C, Bisschop K, Blankers T, Cairns J, Colizzi ESandro, Cusseddu D, Desai MM et al..  2023.  Towards evolutionary predictions: Current promises and challenges.. Evol Appl. 16(1):3-21.
Mann R, Notani D.  2023.  Transcription factor condensates and signaling driven transcription.. Nucleus. 14(1):2205758.
Syiem BL, Driscoll DA, Vasudev D, Goswami VR.  2023.  Tropical agricultural wooded land uses support high site use of forest birds. Biological Conservation. 281:109986.
Nandavaram A, Nandakumar A, Kashif GM, Sagar ALakshman, Shailaja G, Ramesh A, Siddavattam D.  2023.  Unusual Relationship between Iron Deprivation and Organophosphate Hydrolase Expression.. Appl Environ Microbiol. :e0190322.
Sreedharan V, Bhalla US, Ramakrishnan N.  2023.  Using sensitivity analyses to understand bistable system behavior.. BMC Bioinformatics. 24(1):136.
Sane SP, Manjunath M, Mukunda CL.  2023.  Vestibular feedback for flight control in hawkmoths.. Trends Neurosci.
Lahree A, Baptista Sde Jesus S, Marques S, Perschin V, Zuzarte-Luís V, Goel M, Choudhary HHasan, Mishra S, Stigloher C, Zerial M et al..  2022.  Active APPL1 sequestration by Plasmodium favors liver-stage development.. Cell Rep. 39(9):110886.
Saha S, Das A, Patra C, Anilkumar AA, Sil P, Mayor S, Rao M.  2022.  Active emulsions in living cell membranes driven by contractile stresses and transbilayer coupling. Proc Natl Acad Sci U S A.. 119(30):e2123056119.
Natesan R, Gowrishankar K, Kuttippurathu L, Kumar PBSunil, Rao M.  2022.  Active Remodeling of Chromatin and Implications for Folding.. J Phys Chem B.
Bansal A, Das A, Rao M.  2022.  Active segregation dynamics in the living cell. INDIAN JOURNAL OF PHYSICS.
Barneda D, Janardan V, Niewczas I, Collins DM, Cosulich S, Clark J, Stephens LR, Hawkins PT.  2022.  Acyl chain selection couples the consumption and synthesis of phosphoinositides.. EMBO J. :e110038.
Panda A, Thakur R, Kumari A, Raghu P.  2022.  Analysis of Lipid Signaling in Drosophila Photoreceptors using Mass Spectrometry.. J Vis Exp. (181)
Jha RRaj, Isvaran K.  2022.  Antelope space-use and behavior indicate multilevel responses to varying anthropogenic influences in a highly human-dominated landscape.. Ecol Evol. 12(10):e9372.
Choudhury SDey, Dwivedi MKumar, Pippadpally S, Patnaik A, Mishra S, Padinjat R, Kumar V.  2022.  AP2 regulates Thickveins trafficking to attenuate NMJ growth signaling in .. eNeuro.
Kitnya N, Otis GW, Chakravorty J, Smith DR, Brockmann A.  2022.  Apis laboriosa confirmed by morphometric and genetic analyses of giant honey bees (Hymenoptera, Apidae) from sites of sympatry in Arunachal Pradesh, North East India. APIDOLOGIE. 53(4):47.
Kumar M, Singh A, Del Secco B, Baranov MV, van den Bogaart G, Sacanna S, Thutupalli S.  2022.  Assembling anisotropic colloids using curvature-mediated lipid sorting.. Soft Matter.
Krishnan A, Osuri AM.  2022.  Beyond the passive-active dichotomy: aligning research with the intervention continuum framework of ecological restoration. RESTORATION ECOLOGY .
Krishna S, Prasad R.  2022.  Building Indian Biomedical Leadership to Bridge the Gap Between Science, Primary Health Care and Public Health.. J Indian Inst Sci. :1-7.
Joshi S, Sawant D, Ogale H, Kunte K.  2022.  Burmagomphus chaukulensis, a new species of dragonfly (Odonata: Anisoptera: Gomphidae) from the Western Ghats, Maharashtra, India. ZOOTAXA . 5133(3):413-430.
Garcia-Font N, Mitchell-Heggs R, Saxena K, Gabbert C, Taylor G, Mastroberadino G, Spooner PA, Gobbo F, Dabrowska JK, Chattarji S et al..  2022.  Ca2+ imaging of self and other in medial prefrontal cortex during social dominance interactions in a tube test.. Proc Natl Acad Sci U S A. 119(31):e2107942119.
Bagchi B, Seal S, Raina M, Basu DNath, Khan I.  2022.  Carcass Scavenging Relaxes Chemical-Driven Female Interference Competition in Flour Beetles. AMERICAN NATURALIST.
Agashe D, Maheshwary S, Pattanaik JKumar, Prakash J, Bhatt P, Arya S.S, Chatterjee S, Kumar P, Singh P, Abbas N et al..  2022.  Career challenges for young independent researchers in India. CURRENT SCIENCE. 122(2):135-143.
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Anujan K, Ratnam J, Sankaran M.  2022.  Chronic browsing by an introduced mammalian herbivore in a tropical island alters species composition and functional traits of forest understory plant communities. BIOTROPICA .
Eriksson O, Bhalla USingh, Blackwell KT, Crook SM, Keller D, Kramer A, Linne M-L, Saudargienė A, Wade RC, Kotaleski JHellgren.  2022.  Combining hypothesis- and data-driven neuroscience modeling in FAIR workflows.. Elife. 11
Morin DJ, Boulanger J, Bischof R, Lee DC, Ngoprasert D, Fuller AK, McLellan B, Steinmetz R, Sharma S, Garshelis D et al..  2022.  Comparison of methods for estimating density and population trends for low-density Asian bears. GLOBAL ECOLOGY AND CONSERVATION. 35(e02058)
K Shafi M, Sowdhamini R.  2022.  Computational analysis of potential candidate genes involved in the cold stress response of ten Rosaceae members.. BMC Genomics. 23(1):516.
Bheemireddy S, Sandhya S, Srinivasan N, Sowdhamini R.  2022.  Computational tools to study RNA-protein complexes.. Front Mol Biosci. 9:954926.
Coetsee C., Wigley B.J, Sankaran M., Ratnam J., Augustine D.J.  2022.  Contrasting Effects of Grazing vs Browsing Herbivores Determine Changes in Soil Fertility in an East African Savanna. ECOSYSTEMS .
Prakash A, Agashe D, Khan I.  2022.  The costs and benefits of basal infection resistance vs immune priming responses in an insect.. Dev Comp Immunol. 126:104261.
Tirumalai V, Narjala A, Swetha C, G Sundar VHari, Sujith TN, Shivaprasad PV.  2022.  Cultivar-specific miRNA-mediated RNA silencing in grapes.. Planta. 256(1):17.
Sahasrabuddhe V, Ghosh HS.  2022.  Cx3Cr1-Cre induction leads to microglial activation and IFN-1 signaling caused by DNA damage in early postnatal brain.. Cell Rep. 38(3):110252.
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Dua N, Seshadri A, Badrinarayanan A.  2022.  DarT-mediated mtDNA damage induces dynamic reorganization and selective segregation of mitochondria.. J Cell Biol. 221(10)
Sarkar SR, Dubey VKumar, Jahagirdar A, Lakshmanan V, Haroon MMohamed, Sowndarya S, Sowdhamini R, Palakodeti D.  2022.  DDX24 is required for muscle fiber organization and the suppression of wound-induced Wnt activity necessary for pole re-establishment during planarian regeneration.. Dev Biol.
Rajagopal D, Sopory SK, Mathew M.K.  2022.  Dealing with Environmental Fluctuations: Diversity of Potassium Uptake Systems Across the Three Domains of Life. JOURNAL OF PLANT GROWTH REGULATION .
Singh J, Raina R, Vinothkumar KR, Anand R.  2022.  Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.. ACS Chem Biol.
Singh M, Roychowdhury A, Gupta A.  2022.  Defects and metric anomalies in Foppl-von Karman surfaces. PROCEEDINGS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES. 478(2262):20210829.