Author Title Type [ Year(Asc)]
2022
Chauhan PKumar, Sowdhamini R.  2022.  Integrative network analysis interweaves the missing links in cardiomyopathy diseasome.. Sci Rep. 12(1):19670.
Chen S., Li J., Vinothkumar KR, Henderson R..  2022.  Interaction of human erythrocyte catalase with air-water interface in cryoEM.. Microscopy (Oxf). 71((Supplement_1)):i51-i59.
G VHari Sunda, Shivaprasad PV.  2022.  Investigation of Transposon DNA Methylation and Copy Number Variation in Plants Using Southern Hybridisation.. Bio Protoc. 12(11):e4432.
Baranov MV, Ioannidis M, Balahsioui S, Boersma A, de Boer R, Kumar M, Niwa M, Hirayama T, Zhou Q, Hopkins TM et al..  2022.  Irregular particle morphology and membrane rupture facilitate ion gradients in the lumen of phagosomes.. Biophys Rep (N Y). 2(3):100069.
Chauhan PKumar, Sowdhamini R.  2022.  LIM domain-wide comprehensive virtual mutagenesis provides structural rationale for cardiomyopathy mutations in CSRP3.. Sci Rep. 12(1):3562.
Chen N, Zhang Y, Adel M, Kuklin EA, Reed ML, Mardovin JD, Bakthavachalu B, VijayRaghavan K, Ramaswami M, Griffith LC.  2022.  Local translation provides the asymmetric distribution of CaMKII required for associative memory formation.. Curr Biol.
Madhusudan M.D, Vanak ATamim.  2022.  Mapping the distribution and extent of India's semi-arid open natural ecosystems. JOURNAL OF BIOGEOGRAPHY.
Joseph AMary, Nahar K, Daw S, Hasan MMahbub, Lo R, Le TBK, Rahman KMiraz, Badrinarayanan A.  2022.  Mechanistic insight into the repair of C8-linked pyrrolobenzodiazepine monomer-mediated DNA damage.. RSC Med Chem. 13(12):1621-1633.
Shivakumaraswamy S, Kumar S, Bellur A, Polisetty SDev, Balaram H.  2022.  Mechanistic Insights into the Functioning of a Two-Subunit GMP Synthetase, an Allosterically Regulated, Ammonia Channeling Enzyme. BIOCHEMISTRY. 61(18):1988-2006.
Kumar S, M Venkatesha A, Balaram P.  2022.  Mechanistic Investigations on N-C Bond Cleavages in Dibasic Peptides Containing Internal Lys and Arg Residues.. J Am Soc Mass Spectrom.
Yadahalli S, Jayanthi LP, Gosavi S.  2022.  A Method for Assessing the Robustness of Protein Structures by Randomizing Packing Interactions.. Front Mol Biosci. 9:849272.
Punjabi GA, Havmøller LWorsøe, Havmøller RWorsøe, Ngoprasert D, Srivathsa A.  2022.  Methodological approaches for estimating populations of the endangered dhole .. PeerJ. 10:e12905.
Theeyancheri L, Chaki S, Bhattacharjee T, Chakrabarti R.  2022.  Migration of active rings in porous media.. Phys Rev E. 106(1-1):014504.
Arvindekar S, Jackman MJ, Low JKK, Landsberg MJ, Mackay JP, Viswanath S.  2022.  Molecular architecture of nucleosome remodeling and deacetylase sub-complexes by integrative structure determination.. Protein Sci. 31(9):e4387.
Kashyap A, Sebastian SAnne, NarayanaSwamy SRaksha Kri, Raksha KK, Krishnamurthy H, Krishna B, D'Souza G, Idiculla J, Vyas N.  2022.  Molecular markers for early stratification of disease severity and progression in COVID-19.. Biol Methods Protoc. 7(1):bpac028.
Agarwal I, Thackeray T, Khandekar A.  2022.  A multitude of spots! Five new microendemic species of the Cnemaspis gracilis group (Squamata: Gekkonidae) from massifs in the Shevaroy landscape, Tamil Nadu, India. Vertebrate Zoology. 72:1137-1186.
Malhotra P, Udgaonkar JB.  2022.  Native State Hydrogen Exchange-Mass Spectrometry Methods to Probe Protein Folding and Unfolding.. Methods Mol Biol. 2376:143-159.
Shukla H, Suryamohan K, Khan A, Mohan K, Perumal RC, Mathew OK, Menon R, Dixon MD, Muraleedharan M, Kuriakose B et al..  2022.  Near-chromosomal de novo assembly of Bengal tiger genome reveals genetic hallmarks of apex predation. . Gigascience. 12:giac112
Atreya KB, Saba JD.  2022.  Neurological Consequences of Sphingosine Phosphate Lyase Insufficiency.. Front Cell Neurosci. 16:938693.
Mirza ZA, Bragin AM, Bhosale H, Gowande G, Patel H, Poyarkov NA.  2022.  A new ancient lineage of ablepharine skinks (Sauria: Scincidae) from eastern Himalayas with notes on origin and systematics of the group. PeerJ. 10:e12800.
Rathee YSingh, Purkayastha J, Lalremsanga HTlawmte, Dalal S, Biakzuala L, Muansanga L, Mirza ZA.  2022.  A new cryptic species of green pit viper of the genus Trimeresurus Lacépède, 1804 (Serpentes, Viperidae) from northeast India.. PLoS One. 17(5):e0268402.
Raj S, Kumar ABiju, Ng PKL.  2022.  New Genus and Two New Species of Semiterrestrial Crabs (Decapoda: Brachyura: Gecarcinucidae) from the Southern Western Ghats, India.. Zool Stud. 61:e49.
Mirza ZA, Bhosale H, Ansari F, Phansalkar P, Sawant M, Gowande G, Patel H.  2022.  A new species of bent-toed geckos of the genus Cyrtodactylus Gray, 1827 from western Arunachal Pradesh, India. HERPETOZOA . 35:65-76.
Sanap R, Pawar S, Joglekar A, Khandekar A.  2022.  A new species of Conothele Thorell, 1878 (Aranei Halonoproctidae) from the northern Western Ghats, India. ARTHROPODA SELECTA. 31(1):79-89.
Pachamuthu K, Sundar VHari, Narjala A, Singh RR, Das S, Pal HCYAvik, Shivaprasad PV.  2022.  Nitrate-dependent regulation of miR444-OsMADS27 signaling cascade controls root development in rice.. J Exp Bot.
Saini N, Lakshminarayanan S, Kundu P, Sarin A.  2022.  Notch1 Modulation of Cellular Calcium Regulates Mitochondrial Metabolism and Anti-Apoptotic Activity in T-Regulatory Cells.. Front Immunol. 13:832159.
Ghosh E, Sasidharan A, Ode PJ, Venkatesan R.  2022.  Oviposition Preference and Performance of a Specialist Herbivore Is Modulated by Natural Enemies, Larval Odors, and Immune Status.. J Chem Ecol.
Bhattacharyya T, Nayak S, Goswami S, Gadiyaram V, Mathew OK, Sowdhamini R.  2022.  PASS2.7: a database containing structure-based sequence alignments and associated features of protein domain superfamilies from SCOPe.. Database (Oxford). 2022
Sidhanth C, Bindhya S, Krishnapriya S, Manasa P, Shabna A, Alifia J, Patole C, Kumar V, Garg M, Ganesan TS.  2022.  Phosphoproteome of signaling by ErbB2 in ovarian cancer cells.. Biochim Biophys Acta Proteins Proteom. :140768.
Mukhopadhyay A, Quader S.  2022.  Pollination inaccuracy: estimating male fitness in the movement-assisted dichogamous species Clerodendrum infortunatum. Evolutionary Ecology.
Indu M, Meera B, Sivakumar K, Mahadevan C, Shafi K, Nagarathnam B, Sowdhamini R, Sakuntala M.  2022.  ‘Priming’ protects Piper nigrum L. from Phytophthora capsici through reinforcement of phenylpropanoid pathway and possible enhancement of Piperine biosynthesis . Front. Plant Sci.. 13
Ullanat V, Kasukurthi N, Viswanath S.  2022.  PrISM: Precision for Integrative Structural Models. Bioinformatics.
Wang Z, Da W, Negi CSingh, Ghimire PLal, Wangdi K, Yadav PK, Pubu Z, Lama L, Yarpel K, Maunsell SC et al..  2022.  Profiling, monitoring and conserving caterpillar fungus in the Himalayan region using anchored hybrid enrichment markers.. Proc Biol Sci. 289(1973):20212650.
Parekh A, Das S, Das CK, Mandal M.  2022.  Progressing Towards a Human-Centric Approach in Cancer Research.. Front Oncol. 12:896633.
Tripathy M, Srivastava A, Sastry S, Rao M.  2022.  Protein as evolvable functionally constrained amorphous matter.. J Biosci. 47
Kharva H, Feder JL, Hahn DA, Olsson SB.  2022.  Rapid brain development and reduced neuromodulator titres correlate with host shifts in .. R Soc Open Sci. 9(9):220962.
Kent BA, Holman C, Amoako E, Antonietti A, Azam JM, Ballhausen H, Bediako Y, Belasen AM, Carneiro CFD, Chen Y-C et al..  2022.  Recommendations for empowering early career researchers to improve research culture and practice.. PLoS Biol. 20(7):e3001680.
Köster DVasco, Bhat A, Talluri S, Mayor S.  2022.  Reconstitution of Membrane-tethered Minimal Actin Cortices on Supported Lipid Bilayers.. J Vis Exp. (185)
Thirumalai V, Jha U.  2022.  Recruitment of Motoneurons.. Vertebrate Motoneurons (Series: Advances in Neurobiology). 28:169-190.
Malhotra N, Seshasayee ASai Narain.  2022.  Replication-dependent organisation constrains positioning of long DNA repeats in bacterial genomes.. Genome Biol Evol.
Jain PKumar, Jayappa S, Sairam T, Mittal A, Paul S, Rao VJ, Chittora H, Kashyap DK, Palakodeti D, Thangaraj K et al..  2022.  Ribosomal protein S6 kinase beta-1 gene variants cause hypertrophic cardiomyopathy.. J Med Genet. 59(10):984-992.
Smith MD, Koerner SE, Avolio ML, Komatsu KJ, Eby S, Forrestel EJ, Collins SL, Wilcox KR, Ahumada R, Morgan JW et al..  2022.  Richness, not evenness, varies across water availability gradients in grassy biomes on five continents.. Oecologia. 199(3):649-659.
Naskar S, Datta S, Chattarji S.  2022.  Riluzole prevents stress-induced spine plasticity in the hippocampus but mimics it in the amygdala.. Neurobiol Stress. 18:100442.
Nandy P.  2022.  The role of sigma factor competition in bacterial adaptation under prolonged starvation.. Microbiology (Reading). 168(5)
Dey R, Chattarji S.  2022.  The same stress elicits different effects on anxiety-like behavior in rat models of Fmr1 and Pten.. Behav Brain Res. :113892.
Parekh P, Bhalerao GVivek, John JP, Venkatasubramanian G.  2022.  Sample size requirement for achieving multisite harmonization using structural brain MRI features.. Neuroimage. :119768.
Naik D., Rao R.S.P., Kunte K., Mustak MS.  2022.  Seasonal dynamics and polyphenism of butterfly communities in the coastal plains of central Western Ghats, India . Journal of Biosciences volume. 47:79.
Wahl LM, Agashe D.  2022.  Selection bias in mutation accumulation.. Evolution.
Kumari A, Ghosh A, Kolay S, Raghu P.  2022.  Septins tune lipid kinase activity and PI(4,5)P turnover during G-protein-coupled PLC signalling in vivo.. Life Sci Alliance. 5(6)
Dubey J, Mondal S, Koushika SP.  2022.  A Simple Microfluidic Chip for Long-Term Growth and Imaging of Caenorhabditis elegans.. J Vis Exp. (182)
Krishnan A, Osuri AM, Krishnadas M.  2022.  Small mammals reduce distance dependence and increase seed predation risk in tropical rainforest fragments. BIOTROPICA.
Chatterjee P, Mohan U, Sane SP.  2022.  Small-amplitude head oscillations result from a multimodal head stabilization reflex in hawkmoths.. Biol Lett. 18(11):20220199.
Chimthanawala A, Parmar JJ, Kumar S, Iyer KS, Rao M, Badrinarayanan A.  2022.  SMC protein RecN drives RecA filament translocation for in vivo homology search.. Proc Natl Acad Sci U S A. 119(46):e2209304119.
Dubey VKumar, Sarkar SR, Lakshmanan V, Dalmeida R, Gulyani A, Palakodeti D.  2022.  Smed-ETS-1 regulates cathepsin+ cell function and epidermal lineage landscape via basement membrane remodeling.. J Cell Sci.
Badarinath K, Dam B, Kataria S, Zirmire RK, Dey R, Kansagara G, Ajnabi J, Hegde A, Singh R, Masudi T et al..  2022.  Snail maintains the stem/progenitor state of skin epithelial cells and carcinomas through the autocrine effect of matricellular protein Mindin.. Cell Rep. 40(12):111390.
Karkarey R, Arthur R, Nash KL, Pratchett MS, Sankaran M, Graham NAJ.  2022.  Spatial decoupling of ? and ? diversity suggest different management needs for coral reef fish along an extensive mid-oceanic ridge GLOBAL ECOLOGY AND CONSERVATION. 36(e02110)
Mitra R, Hasan G.  2022.  Store-operated Ca2+ entry regulates neuronal gene expression and function.. Curr Opin Neurobiol. 73:102520.
Bose M, Nawaz MSarfaraz, Pal R, Chattarji S.  2022.  Stress Elicits Contrasting Effects on Rac1-Cofilin Signaling in the Hippocampus and Amygdala.. Front Mol Neurosci. 15:880382.
Naveenkumar N, Prabantu VManjveekar, Vishwanath S, Sowdhamini R, Srinivasan N.  2022.  Structures of distantly-related interacting protein homologues are less divergent than non-interacting homologues.. FEBS Open Bio.
Gouthaman S, Jayaraj A, Sugunalakshmi M, Sivaraman G, P CAyya Swamy.  2022.  Supramolecular self-assembly mediated aggregation-induced emission of fluorene-derived cyanostilbenes: multifunctional probes for live cell-imaging.. J Mater Chem B.
Schoen JM, Neelakantan A, Cushman SA, Dutta T, Habib B, Jhala YV, Mondal I, Ramakrishnan U, P Reddy A, Saini S et al..  2022.  Synthesizing habitat connectivity analyses of a globally important human-dominated tiger-conservation landscape.. Conserv Biol.
Das AAbin, Ratnam J.  2022.  The thermal niche and phylogenetic assembly of evergreen tree metacommunities in a mid-to-upper tropical montane zone.. Proc Biol Sci. 289(1977):20220038.
Marathe K, Sanap R, Joglekar A, Caleb JTD, Maddison WP.  2022.  Three new and notes on two other jumping spider species of the genus Stenaelurillus Simon, 1886 (Salticidae: Aelurillina) from the Deccan Plateau, India.. Zootaxa. 5125(1):1-19.
Khandekar A, Thackeray T, Agarwal I.  2022.  Three new cryptic species of South Asian Cnemaspis Strauch, 1887 (Squamata, Gekkonidae) from Karnataka, India. VERTEBRATE ZOOLOGY . 72:115-142.
Rana D, Samad I, Rastogi S.  2022.  To a charismatic rescue: Designing a blueprint to steer Fishing Cat conservation for safeguarding Indian wetlands. JOURNAL FOR NATURE CONSERVATION. 68(126225)
Farooq U, Notani D.  2022.  Transcriptional regulation of INK4/ARF locus by cis and trans mechanisms.. Front Cell Dev Biol. 10:948351.
Singh A, Kandi AReddy, Jayaprakashappa D, Thuery G, Purohit DJ, Huelsmeier J, Singh R, Pothapragada SShruti, Ramaswami M, Bakthavachalu B.  2022.  The Transcriptional Response to Oxidative Stress is Independent of Stress-Granule Formation.. Mol Biol Cell. :mbcE21080418.
K Shafi M, Sajeevan RSivarajan, Kouser S, Vishnuprasad CN, Sowdhamini R.  2022.  Transcriptome profiling of two Moringa species and insights into their antihyperglycemic activity.. BMC Plant Biol. 22(1):561.
Chakrabarti A, Kaushik M, Khan J, Soota D, Ponnusamy K, Saini S, Manvati S, Singhal J, Ranganathan A, Pati S et al..  2022.  tREPs-A New Class of Functional tRNA-Encoded Peptides.. ACS Omega. 7(22):18361-18373.
Dhanya SKumari, Hasan G.  2022.  Two photon imaging of calcium responses in murine Purkinje neurons.. STAR Protoc. 3(1):101105.
Chakraborty S, Singh P, Seshasayee ASai Narain.  2022.  Understanding the Genome-Wide Transcription Response To Various cAMP Levels in Bacteria Using Phenomenological Models.. mSystems. :e0090022.
Banerjee JPrasad, Mandal R, Banerjee DSankar, Thutupalli S, Rao M.  2022.  Unjamming and emergent nonreciprocity in active ploughing through a compressible viscoelastic fluid.. Nat Commun. 13(1):4533.
Sanyal A, Agarwal S, Ramakrishnan U, Garg KM, Chattopadhyay B.  2022.  Using Environmental Sampling to Enable Zoonotic Pandemic Preparedness.. J Indian Inst Sci. :1-20.
Mukherjee S, Shelar B, Krishna S.  2022.  Versatile role of miR-24/24-1*/24-2*expression in cancer and other human diseases. AMERICAN JOURNAL OF TRANSLATIONAL RESEARCH . 14(1):20-54.
Mehra S, Ahlawat S, Kumar H, Datta D, Navalkar A, Singh N, Patel K, Gadhe L, Kadu P, Kumar R et al..  2022.  α-Synuclein aggregation intermediates form fibril polymorphs with distinct prion-like properties.. J Mol Biol. :167761.
2021
Prakash D, Ms A, Radhika B, Venkatesan R, Chalasani SH, Singh V.  2021.  1-Undecene from Pseudomonas aeruginosa is an olfactory signal for flight-or-fight response in Caenorhabditis elegans.. EMBO J. :e106938.
Young A.M., Brockmann A, Dyer F.C..  2021.  Adaptive tuning of the exploitation-exploration trade-off in four honey bee species. Behavioral Ecology and Sociobiology. 75(20)
Sarkar D, Shariq M, Dwivedi D, Krishnan N, Naumann R, Bhalla USingh, Ghosh HS.  2021.  Adult brain neurons require continual expression of the schizophrenia-risk gene Tcf4 for structural and functional integrity.. Transl Psychiatry. 11(1):494.
Shariq M, Sahasrabuddhe V, Krishna S, Radha S, Bellampalli R, Dwivedi A, Cheramangalam R, Reizis B, Hébert J, Ghosh HS.  2021.  Adult neural stem cells have latent inflammatory potential that is kept suppressed by to facilitate adult neurogenesis.. Sci Adv. 7(21)
Subhash N, Sundaramurthy V.  2021.  Advances in host-based screening for compounds with intracellular anti-mycobacterial activity.. Cell Microbiol. :e13337.
Nasrallah C, Cannone G, Briot J, Rottier K, Berizzi AE, Huang C-Y, Quast RB, Hoh F, Banères J-L, Malhaire F et al..  2021.  Agonists and allosteric modulators promote signaling from different metabotropic glutamate receptor 5 conformations.. Cell Rep. 36(9):109648.
Singh A, Thakur NL.  2021.  Allelopathic interaction among rocky intertidal invertebrates: sponge Cinachyrella cf. cavernosa and Zooxanthellate zoanthids Zoanthus sansibaricus. Hydrobiologia.
Hao N, Agnew D, Krishna S, Dodd IB, Shearwin KE.  2021.  Analysis of Infection Time Courses Shows CII Levels Determine the Frequency of Lysogeny in Phage 186.. Pharmaceuticals (Basel). 14(10)
Agarwal I, Thackeray T, Khandekar A.  2021.  Anew medium-sized rupicolous Cnemaspis Strauch, 1887 (Squamata: Gekkonidae) of the C. bangara clade from granite boulder habitats in Krishnagiri, Tamil Nadu, India. ZOOTAXA. 4969(4969):351-366.
Singh A, Hulsmeier J, Kandi AReddy, Pothapragada SShruti, Hillebrand J, Petrauskas A, Agrawal K, Rt K, Thiagarajan D, Jayaprakashappa D et al..  2021.  Antagonistic roles for Ataxin-2 structured and disordered domains in RNP condensation.. Elife. 10
Juma M, Sankaradoss A, Ndombi R, Mwaura P, Damoda T, Nazir J, Pandit A, Khurana R, Masika M, Chirchir R et al..  2021.  Antimicrobial Resistance Profiling and Phylogenetic Analysis of Neisseria gonorrhoeae Clinical Isolates From Kenya in a Resource-Limited Setting. Front. Microbiol.
Bhatia S, Narayanan N, Nagpal S, Nair DT.  2021.  Antiviral therapeutics directed against RNA dependent RNA polymerases from positive-sense viruses.. Mol Aspects Med. :101005.
Menon T, Shahabuddin G(.  2021.  Assessing woodpeckers as indicators of bird diversity and habitat structure in managed forests. BIODIVERSITY AND CONSERVATION.
Chandrasekaran A, Dittlau KStoklund, Corsi GI, Haukedal H, Doncheva NT, Ramakrishna S, Ambardar S, Salcedo C, Schmidt SI, Zhang Y et al..  2021.  Astrocytic reactivity triggered by defective autophagy and metabolic failure causes neurotoxicity in frontotemporal dementia type 3.. Stem Cell Reports. 16(11):2736-2751.
Ramakrishnan U.  2021.  At the crossroads: molecular ecology and wildlife conservation.. J Indian Inst Sci. :1-2.
Rajus S, Bhagavan SG, Kharva H, Rao S, Olsson SB.  2021.  Behavioral Ecology of the Coffee White Stem Borer: Toward Ecology-Based Pest Management of India's Coffee Plantations. FRONTIERS IN ECOLOGY AND EVOLUTION. 9(607555)
Das A, Vishvakarma V, Dey A, Dey S, Gupta A, Das M, Vishwakarma KKant, Roy DSaha, Yadav S, Kesarwani S et al..  2021.  Biophysical Properties of the Isolated Spike Protein Binding Helix of Human ACE2.. Biophys J.
Samhita L.  2021.  The Boggarts of biology: how non-genetic changes influence the genotype.. Curr Genet. 67(1):65-77.
Spedding M, Chattarji S, Spedding C, Jay TM.  2021.  Brain circuits at risk in psychiatric diseases and pharmacological pathways.. Therapie. 76(2):75-86.
Moreno-Layseca P, Jäntti NZ, Godbole R, Sommer C, Jacquemet G, Al-Akhrass H, Conway JRW, Kronqvist P, Kallionpää RE, Oliveira-Ferrer L et al..  2021.  Cargo-specific recruitment in clathrin- and dynamin-independent endocytosis.. Nat Cell Biol.
Nayim P, Mbaveng AT, Sanjukta M, Rikesh J, Kuete V, Krishna S.  2021.  CD24 gene inhibition and TIMP-4 gene upregulation by Imperata cylindrica's root extract prevents metastasis of CaSki cells via inhibiting PI3K/Akt/snail signaling pathway and blocking EMT. J Ethnopharmacol.
Jana SChandra.  2021.  Centrosome structure and biogenesis: Variations on a theme? Semin Cell Dev Biol.
Arumugam S, Schmieder S, Pezeshkian W, Becken U, Wunder C, Chinnapen D, Ipsen JHjort, Kenworthy AK, Lencer W, Mayor S et al..  2021.  Ceramide structure dictates glycosphingolipid nanodomain assembly and function.. Nat Commun. 12(1):3675.
Nishad S, Chauhan PKumar, Sowdhamini R, Ghosh A.  2021.  Chronic exposure of humans to high level natural background radiation leads to robust expression of protective stress response proteins.. Sci Rep. 11(1):1777.
Brilot AF, Lyon SA, Zelter A, Viswanath S, Maxwell A, MacCoss MJ, Muller EJ, Sali A, Davis TN, Agard DA.  2021.  CM1-driven assembly and activation of yeast γ-tubulin small complex underlies microtubule nucleation. Elife. 10

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