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Bhatia S, Krishnamoorthy G, Udgaonkar JB. 2021. Mapping Distinct Sequences of Structure Formation Differentiating Multiple Folding Pathways of a Small Protein.. J Am Chem Soc.
Vijayaraghavareddy P, Akula NN, Vemanna RS, Math RGH, Shinde DD, Yin X, Struik PC, Makarla U, Sreeman S. 2021. Metabolome profiling reveals impact of water limitation on grain filling in contrasting rice genotypes.. Plant Physiol Biochem. 162:690-698.
Dhanyasi N, VijayRaghavan K, Shilo B-Z, Schejter ED. 2021. Microtubules provide guidance cues for myofibril and sarcomere assembly and growth.. Dev Dyn. 250(1):60-73.
Baranov MV, Kumar M, Sacanna S, Thutupalli S, van den Bogaart G. 2021. Modulation of Immune Responses by Particle Size and Shape.. Front Immunol. 607945
Rege A, Punjabi GArjun, Jathanna D, Kumar A. 2020. Mammals Make Use of Cashew Plantations in a Mixed Forest-Cashew Landscape. FRONTIERS IN ENVIRONMENTAL SCIENCE. 8(556942)
Kaushik S, Mahadeva M, Sundaramurthy V, Soni GVivek. 2020. Measurement of Alcohol-Dependent Physiological Changes in Red Blood Cells Using Resistive Pulse Sensing.. ACS Sens.
Aghera NK, Prabha J, Tandon H, Chattopadhyay G, Vishwanath S, Srinivasan N, Varadarajan R. 2020. Mechanism of CcdA-Mediated Rejuvenation of DNA Gyrase.. Structure. 28(5):562-572.e4.
Kumar S, M Venkatesha A, Lall S, Prakash S, Balaram P. 2020. Mechanistic Insights into an Unusual Side-Chain-Mediated N-C Bond Cleavage under Collision-Induced Dissociation Conditions in the Disulfide-Containing Peptide Conopressin.. J Am Soc Mass Spectrom. 31(5):1083-1092.
Arora R, Choi JEun, Harms PW, Chandrani P. 2020. Merkel Cell Polyomavirus in Merkel Cell Carcinoma: Integration Sites and Involvement of the KMT2D Tumor Suppressor Gene.. Viruses. 12(9)
Ghosh-Harihar M, Gurung N, Shukla H, Sinha I, Pandit A, Prakash V, Green RE, Ramakrishnan U. 2020. Metabarcoding for parallel identification of species, sex and diet of obligate scavengers: an application to globally-threatened Gyps vultures. CONSERVATION GENETICS RESOURCES.
Goodale E, Sridhar H, Sieving KE, Bangal P, Z GJColorado, Farine DR, Heymann EW, Jones HH, Krams I, Martínez AE et al.. 2020. Mixed company: a framework for understanding the composition and organization of mixed-species animal groups.. Biol Rev Camb Philos Soc.
Sharma A, Hasan G. 2020. Modulation of flight and feeding behaviours requires presynaptic IPRs in dopaminergic neurons.. Elife. 9
Javali A, Lakshmanan V, Palakodeti D, Sambasivan R. 2020. Modulation of β-catenin levels regulates cranial neural crest patterning and dispersal into first pharyngeal arch.. Dev Dyn.
Manikkaraja C, Bhavika M, Singh R, Nagarathnam B, George G, Gulyani A, Archunan G, Sowdhamini R. 2020. Molecular and functional characterization of buffalo nasal epithelial odorant binding proteins and their structural insights by in silico and biochemical approaches. J Biomol Struct Dyn. :1-24.
Kuwalekar M, Deshmukh R, Padvi A, Kunte K. 2020. Molecular Evolution and Developmental Expression of Melanin Pathway Genes in Lepidoptera. FRONTIERS IN ECOLOGY AND EVOLUTION. 8
Habibullah BIsmail, Tripathi V, Surana P, Das R. 2020. Monitoring protein ubiquitination and SUMOylation in real-time by NMR.. Chem Commun (Camb). 56(49):6735-6738.
Parma V, Ohla K, Veldhuizen MG, Niv MY, Kelly CE, Bakke AJ, Cooper KW, Bouysset C, Pirastu N, Dibattista M et al.. 2020. More than smell - COVID-19 is associated with severe impairment of smell, taste, and chemesthesis.. Chem Senses.
Kizhedathu A, Kunnappallil RSebastian, Bagul AV, Verma P, Guha A. 2020. Multiple Wnts act synergistically to induce Chk1/Grapes expression and mediate G2 arrest in Drosophila tracheoblasts.. Elife. 9
Nandy P, Chib S, Seshasayee A. 2020. A Mutant RNA Polymerase Activates the General Stress Response, Enabling Escherichia coli Adaptation to Late Prolonged Stationary Phase. mSphere. 5(5)
Sachdeva K, Goel M, Sudhakar M, Mehta M, Raju R, Raman K, Singh A, Sundaramurthy V. 2020. Mycobacterium tuberculosis ( Mtb) lipid mediated lysosomal rewiring in infected macrophages modulates intracellular Mtb trafficking and survival. J Biol Chem. 295(27):9192-9210.
Trivedi DV, Nag S, Spudich A, Ruppel KM, Spudich JA. 2020. The Myosin Family of Mechanoenzymes: From Mechanisms to Therapeutic Approaches.. Annu Rev Biochem.
Ashe S, Yadav S. 2019. Maintenance of Rhodopsin levels in Drosophila photoreceptor and phototransduction requires Protein Kinase D.. Fly (Austin).
Ramesh D, Brockmann A. 2019. Mass Spectrometric Quantification of Arousal Associated Neurochemical Changes in Single Honey Bee Brains and Brain Regions.. ACS Chem Neurosci. 10(4):950-1959.
Arora R, Vats A, Chimankar V. 2019. MCV Truncated Large T antigen interacts with BRD4 in tumors. Matters.
Gopurappilly R, Deb BKumar, Chakraborty P, Hasan G. 2019. Measurement of Store-Operated Calcium Entry in Human Neural Cells: From Precursors to Differentiated Neurons.. Methods Mol Biol. 2029:257-271.
Kumar H, Udgaonkar JB. 2019. Mechanistic approaches to understand the prion-like propagation of aggregates of the human tau protein.. Biochim Biophys Acta Proteins Proteom. 1867(10):922-932.
Arora R, Rekhi B, Chandrani P, Krishna S, Dutt A. 2019. Merkel cell polyomavirus is implicated in a subset of Merkel cell carcinomas, in the Indian subcontinent.. Microb Pathog. :103778.
Varahan S, Walvekar A, Sinha V, Krishna S, Laxman S. 2019. Metabolic constraints drive self-organization of specialized cell groups.. Elife. 8
Goluguri RReddy, Sen S, Udgaonkar J. 2019. Microsecond sub-domain motions and the folding and misfolding of the mouse prion protein.. Elife. 8
Tirumalai V, Swetha C, Nair A, Pandit A, Shivaprasad PV. 2019. miR828 and miR858 regulate VvMYB114 to promote anthocyanin and flavonol accumulation in grapes.. J Exp Bot.
Kabir S, Venkatesan R, Thaker M. 2019. Mismatch in receiver responses to multimodal signals in a diurnal gecko. Animal Behaviour. 147:115-123.
Sathyanarayanan N, Cannone G, Gakhar L, Katagihallimath N, Sowdhamini R, Ramaswamy S, Vinothkumar KR. 2019. Molecular basis for metabolite channeling in a ring opening enzyme of the phenylacetate degradation pathway.. Nat Commun. 10(1):4127.
Sengupta I, Udgaonkar J. 2019. Monitoring site-specific conformational changes in real-time reveals a misfolding mechanism of the prion protein.. Elife. 8
Huang Z-F, Chiba H, Jin J, Kizhakke AG, Wang M, Kunte K, Fan X. 2019. A multilocus phylogenetic framework of the tribe Aeromachini (Lepidoptera: Hesperiidae: Hesperiinae), with implications for taxonomy and biogeography. Systematic Entomology.
Thatte P, Joshi A, Vaidyanathan S, Landguth E, Ramakrishnan U. 2018. Maintaining tiger connectivity and minimizing extinction into the next century: Insights from landscape genetics and spatially-explicit simulations . BIOLOGICAL CONSERVATION . 218:181-191.
Swetha C, Basu D, Pachamuthu K, Tirumalai V, Nair A, Prasad M, Shivaprasad PV. 2018. Major domestication-related phenotypes in indica rice are due to loss of miRNA-mediated laccase silencing.. Plant Cell.
Vijayasarathy M, Balaram P. 2018. Mass spectrometric identification of bromotryptophan containing conotoxin sequences from the venom of C. amadis.. Toxicon. 144:68-74.
Rupprecht J-F, A Vishen S, Shivashankar GV, Rao M, Prost J. 2018. Maximal Fluctuations of Confined Actomyosin Gels: Dynamics of the Cell Nucleus.. Phys Rev Lett. 120(9):098001.
Sabareesan AThody, Mathew MK, Udgaonkar JB. 2018. Mechanism of aggregation and membrane interactions of mammalian prion protein.. Biochim Biophys Acta.
Kumar H, Udgaonkar JB. 2018. Mechanistic and Structural Origins of the Asymmetric Barrier to Prion-like Cross-Seeding between Tau-3R and Tau-4R.. J Mol Biol.
Thottacherry JJose, Kosmalska AJoanna, Kumar A, Vishen ASingh, Elosegui-Artola A, Pradhan S, Sharma S, Singh PP, Guadamillas MC, Chaudhary N et al.. 2018. Mechanochemical feedback control of dynamin independent endocytosis modulates membrane tension in adherent cells.. Nat Commun. 9(1):4217.
Sant HH, Sane SP. 2018. The Mechanosensory-Motor Apparatus of Antennae in the Oleander hawk moth (Daphnis nerii, Lepidoptera).. J Comp Neurol.
Goyal A. 2018. Metabolic adaptations underlying genome flexibility in prokaryotes.. PLoS Genet. 14(10):e1007763.
Thorpe CJ, Lewis TR, Kulkarni S, Watve A, Gaitonde N, Pryce D, Davies L, Bilton DT, Knight ME. 2018. Micro-habitat distribution drives patch quality for sub-tropical rocky plateau amphibians in the northern Western Ghats, India.. PLoS One. 13(3):e0194810.
Deshmukh R, Baral S, Gandhimathi A, Kuwalekar M, Kunte K. 2018. Mimicry in butterflies: co-option and a bag of magnificent developmental genetic tricks.. Wiley Interdiscip Rev Dev Biol. 7(1)
Krishna S, Laxman S. 2018. A minimal "push-pull" bistability model explains oscillations between quiescent and proliferative cell states.. Mol Biol Cell. :mbcE18010017.
Das S, Hegde A, Shivaprasad PV. 2018. Molecular characterization of a new begomovirus infecting Synedrella nodiflora in South India.. Arch Virol.
Marshall DC, Moulds M, Hill KBR, Price BW, Wade EJ, Owen CL, Goemans G, Marathe K, Sarkar V, et al.. 2018. A molecular phylogeny of the cicadas (Hemiptera: Cicadidae) with a review of tribe and subfamily classification. ZOOTAXA. 4424(1):1-64.
Jayakumar S, Richhariya S, Deb BKumar, Hasan G. 2018. A multi-component neuronal response encodes the larval decision to pupariate upon amino acid starvation.. J Neurosci.
Sabarinathan R, Anthon C, Gorodkin J, Seemann SE. 2018. Multiple Sequence Alignments Enhance Boundary Definition of RNA Structures.. Genes (Basel). 9(12)
Goyal A, Dubinkina V, Maslov S. 2018. Multiple stable states in microbial communities explained by the stable marriage problem.. ISME J.
Pillai AAS, Anoop A, Prasad V. 2018. Multi-proxy evidence for an arid shift in the climate and vegetation of the Banni grasslands of western India during the mid- to late-Holocene. Holocene. 28(7):10572-1070.
Francis B, Mathew M, Arigovindan M.. 2018. Multiresolution-based weighted regularization for denoised image interpolation from scattered samples with application to confocal microscopy . Journal of the Optical Society of America A. 35(10):1749-1759.
Deora T, Gundiah N, Sane SP. 2017. Mechanics of the thorax in flies.. J Exp Biol. 220(Pt 8):1382-1395.
Jayanth N, Puranik M. 2017. Mechanism of Discrimination of 8-Oxoguanosine versus Guanosine by Escherichia coli Fpg.. J Phys Chem B.
Barnosky AD, Hadly EA, Gonzalez P, Head J, P Polly D, A Lawing M, Eronen JT, Ackerly DD, Alex K, Biber E et al.. 2017. Merging paleobiology with conservation biology to guide the future of terrestrial ecosystems.. Science. 355(6325)
Melvin P, Bankapalli K, D'Silva P, Shivaprasad PV. 2017. Methylglyoxal detoxification by a DJ-1 family protein provides dual abiotic and biotic stress tolerance in transgenic plants.. Plant Mol Biol.
Arya D, Sachithanandan SP, Ross C, Palakodeti D, Li S, Krishna S. 2017. MiRNA182 regulates percentage of myeloid and erythroid cells in chronic myeloid leukemia.. Cell Death Dis. 8(1):e2547.
Mogre A, Veetil RT, Seshasayee ASai Narain. 2017. Modulation of Global Transcriptional Regulatory Networks as a Strategy for Increasing Kanamycin Resistance of the Translational Elongation Factor-G Mutants in Escherichia coli.. G3 (Bethesda). 7(12):3955-3966.
Jethva PN, Udgaonkar JB. 2017. Modulation of the Extent of Cooperative Structural Change During Protein Folding by Chemical Denaturant.. J Phys Chem B. 121(35):8263-8275.
Kumar H, Singh J, Kumari P, Udgaonkar JB. 2017. Modulation of the extent of structural heterogeneity in α-synuclein fibrils by the small molecule thioflavin T.. J Biol Chem.
Gangadharan B, Sunitha MS, Mukherjee S, Chowdhury RRoy, Haque F, Sekar N, Sowdhamini R, Spudich JA, Mercer JA. 2017. Molecular mechanisms and structural features of cardiomyopathy-causing troponin T mutants in the tropomyosin overlap region.. Proc Natl Acad Sci U S A.
Schwarz O, Bohra AAsgar, Liu X, Reichert H, VijayRaghavan K, Pielage J. 2017. Motor control of Drosophila feeding behavior.. Elife. 6
Brocke E, Djurfeldt M, Bhalla US, Kotaleski JHellgren, Hanke M. 2017. Multirate method for co-simulation of electrical-chemical systems in multiscale modeling.. J Comput Neurosci.
Goluguri RReddy, Udgaonkar JB. 2016. Microsecond rearrangements of hydrophobic clusters in an initially collapsed globule prime structure formation during the folding of a small protein.. J Mol Biol.
Rasquinha DN, Sankaran M. 2016. Modelling biome shifts in the Indian subcontinent under scenarios of future climate change . Current Science. 111(1):147-156.
Mondal S, Kallianpur MV, Udgaonkar JB, Krishnamoorthy G. 2016. Molecular crowding causes narrowing of population heterogeneity and restricts internal dynamics in a protein. METHODS AND APPLICATIONS IN FLUORESCENCE. 4(1)
Lajmi A, Giri VB, K. Karanth P. 2016. Molecular data in conjunction with morphology help resolve the Hemidactylus brookii complex (Squamata: Gekkonidae). ORGANISMS DIVERSITY & EVOLUTION. 16(3):659-677.
Mutt E, Sowdhamini R. 2016. Molecular Dynamics Simulations and Structural Analysis to Decipher Functional Impact of a Twenty Residue Insert in the Ternary Complex of Mus musculus TdT Isoform.. PLoS One. 11(6):e0157286.
Gandhimathi A, Sowdhamini R. 2016. Molecular modelling of human 5-hydroxytryptamine receptor (5-HT2A) and virtual screening studies towards the identification of agonist and antagonist molecules.. J Biomol Struct Dyn. 34(5):952-70.
Fox SJohn, Li J, Tan YSing, Nguyen MN, Pal A, Ouaray Z, Yadahalli S, Kannan S. 2016. The Multifaceted Roles of Molecular Dynamics Simulations in Drug Discovery.. Curr Pharm Des. 22(23):3585-600.
Garg KM, Chattopadhyay B, Doss DPSwami, Kumar AKVinoth, Kandula S, Ramakrishnan U. 2015. Males and females gain differentially from sociality in a promiscuous fruit bat Cynopterus sphinx.. PLoS One. 10(3):e0122180.
Agrawal T, Hasan G. 2015. Maturation of a central brain flight circuit in Drosophila requires Fz2/Ca²⁺ signaling.. Elife. 4
Raghavender US, Sowdhamini R. 2015. Mechanistic Basis Of Peptide-Protein Interaction In AtPep1-PEPR1 Complex In Arabidopsis thaliana.. Protein Pept Lett. 22(7):618-27.
Gupte TM, Haque F, Gangadharan B, Sunitha MS, Mukherjee S, Anandhan S, Rani DSelvi, Mukundan N, Jambekar A, Thangaraj K et al.. 2015. Mechanistic heterogeneity in contractile properties of α-tropomyosin (TPM1) mutants associated with inherited cardiomyopathies.. J Biol Chem. 290(11):7003-15.
Gupte TM. 2015. Mitochondrial Fragmentation Due to Inhibition of Fusion Increases Cyclin B through Mitochondrial Superoxide Radicals.. PLoS One. 10(5):e0126829.