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Author Title [ Type(Desc)] Year
Journal Article
Gower DJ, Agarwal I, K. Karanth P, Datta-Roy A, Giri VB, Wilkinson M, San Mauro D.  2016.  The role of wet-zone fragmentation in shaping biodiversity patterns in peninsular India: insights from the caecilian amphibian Gegeneophis . JOURNAL OF BIOGEOGRAPHY . 43(6):1091-1102.
Dahake A, Stöckl AL, Foster JJ, Sane SP, Kelber A.  2018.  The roles of vision and antennal mechanoreception in hawkmoth flight control.. Elife. 7
Wigley BJ, Staver C, Zytkowiak R, Jagodzinski AM, Wigley-Coetsee C.  2019.  Root trait variation in African savannas. Plant and Soil. 441(1-2):555–565.
Saha P, Nandi AK, Unnikrishnan S, Shilpa MC, Shukla SP, Mandal S, Mitra A, Gadagkar R.  2018.  A Route to Direct Fitness: Natural and Experimentally Induced Queen Succession in the Tropical Primitively Eusocial Wasp Ropalidia marginata . JOURNAL OF INSECT BEHAVIOR . 31(1):54-65.
Ghosh P, Mathew OK, Sowdhamini R.  2016.  RStrucFam: a web server to associate structure and cognate RNA for RNA-binding proteins from sequence information.. BMC Bioinformatics. 17(1):411.
Shetty R, Joshi D, Jain M, Vasudevan M, Paul JChrysolite, Bhat G, Banerjee P, Abe T, Kiyonari H, VijayRaghavan K et al..  2018.  Rudhira/BCAS3 is essential for mouse development and cardiovascular patterning.. Sci Rep. 8(1):5632.
Moulick R, Goluguri RReddy, Udgaonkar JB.  2019.  Ruggedness in the Free Energy Landscape Dictates Misfolding of the Prion Protein.. J Mol Biol.
Baral A, Irani NG, Fujimoto M, Nakano A, Mayor S, Mathew MK.  2015.  Salt-induced remodeling of spatially restricted clathrin-independent endocytic pathways in Arabidopsis root.. Plant Cell. 27(4):1297-315.
Sengupta I, Bhate SH, Das R, Udgaonkar JB.  2017.  Salt-mediated oligomerization of the mouse prion protein monitored by real time NMR.. J Mol Biol.
Hindle SJ, Hebbar S, Schwudke D, Elliott CJH, Sweeney ST.  2017.  A saposin deficiency model in Drosophila: Lysosomal storage, progressive neurodegeneration and sensory physiological decline.. Neurobiol Dis. 98:77-87.
Ratnam J, Tomlinson KW, Rasquinha DN, Sankaran M.  2016.  Savannahs of Asia: antiquity, biogeography, and an uncertain future.. Philos Trans R Soc Lond B Biol Sci. 371(1703)
Bauer G, Fakhri N, Kicheva A, Kondev J, Kruse K, Noji H, Riveline D, Saunders TE, Thattai M, Wieschaus E.  2018.  The Science of Living Matter for Tomorrow.. Cell Syst. 6(4):400-402.
Srivastava T, Kumar A.  2018.  Seasonal habitat use in three species of wild ungulates in Sikkim Himalaya . MAMMALIAN BIOLOGY . 88:100-106.
Ramesh A.  2015.  Second messenger - Sensing riboswitches in bacteria.. Semin Cell Dev Biol. 47-48:3-8.
Malhotra P, Udgaonkar JB.  2016.  Secondary Structural Change Can Occur Diffusely and Not Modularly during Protein Folding and Unfolding Reactions.. J Am Chem Soc. 138(18):5866-78.
Joshi RS, Quadros R, Drumm M, Ain R, Panicker MM.  2017.  Sedative effect of Clozapine is a function of 5-HT2A and environmental novelty.. Eur Neuropsychopharmacol. 27(1):70-81.
Sasidharan R, Venkatesan R.  2019.  Seed Elaiosome Mediates Dispersal by Ants and Impacts Germination in Ricinus communis. FRONTIERS IN ECOLOGY AND EVOLUTION. 7
Osuri A.M, Sankaran M..  2016.  Seed size predicts community composition and carbon storage potential of tree communities in rainforest fragments in India’s Western Ghats. Journal of Applied Ecology . 53:837-845.
Nayak DD, Agashe D, Lee M-C, Marx CJ.  2016.  Selection Maintains Apparently Degenerate Metabolic Pathways due to Tradeoffs in Using Methylamine for Carbon versus Nitrogen.. Curr Biol. 26(11):1416-26.
Liu G, Patch A, Bahar F, Yllanes D, Welch RD, M Marchetti C, Thutupalli S, Shaevitz JW.  2019.  Self-Driven Phase Transitions Drive Myxococcus xanthus Fruiting Body Formation.. Phys Rev Lett. 122(24):248102.
Tait C, Batra S, Ramaswamy SSubha, Feder JL, Olsson SB.  2016.  Sensory specificity and speciation: a potential neuronal pathway for host fruit odour discrimination in Rhagoletis pomonella.. Proc Biol Sci. 283(1845)
Deb BKumar, Hasan G.  2018.  SEPT7-mediated regulation of Ca entry through Orai channels requires other septin subunits.. Cytoskeleton (Hoboken). 76(1):104-114.
Manoharan M, Muhammad SAuwn, Sowdhamini R.  2015.  Sequence Analysis and Evolutionary Studies of Reelin Proteins.. Bioinform Biol Insights. 9:187-93.
Mani RS, Dovih DP, Ashwini MA, Chattopadhyay B, Harsha PK, Garg KM, Sudarshan S, Puttaswamaiah R, Ramakrishnan U, Madhusudana SN.  2017.  Serological Evidence of Lyssavirus Infection among Bats in Nagaland, a North-Eastern State in India.. Epidemiol Infect. :1-7.
Sarkar A, Mukundan N, Sowndarya S, Dubey VKumar, Babu R, Lakshmanan V, Rangiah K, Panicker MM, Palakodeti D, Subramanian SPeruvemba et al..  2019.  Serotonin is essential for eye regeneration in planaria Schmidtea mediterranea.. FEBS Lett.
Mastro TL, Preza A, Basu S, Chattarji S, Till SM, Kind PC, Kennedy MB.  2020.  A sex difference in the response of the rodent postsynaptic density to synGAP haploinsufficiency. Elife.
Choudhury SDey, Mushtaq Z, Reddy-Alla S, Balakrishnan SS, Thakur RS, Krishnan KS, Raghu P, Ramaswami M, Kumar V.  2016.  sigma(2)-Adaptin Facilitates Basal Synaptic Transmission and Is Required for Regenerating Endo-Exo Cycling Pool Under High-Frequency Nerve Stimulation in Drosophila. GENETICS. 1
Morris RG.  2017.  Signatures of Mechanosensitive Gating.. Biophys J. 112(1):3-9.
Sachdev D., Kumar V., Maheshwari PH, Pesricha R.  2016.  Silver based nanomaterial, as a selective colorimetric sensor for visual detection of post harvest spoilage in onion. Sensors and Actuators B: Chemical. 228(2):471–479.
Bhagavathula NChaitanya, Kumar M, Krishnappa C.  2016.  A simple non-invasive technique for venom milking from a solitary wasp Delta conoideum Gmelin (Hymenoptera: Vespidae).. Toxicon. 109:4-6.
Metri R, Hariharaputran S, Ramakrishnan G, Anand P, Raghavender US, Ochoa-Montaño B, Higueruelo AP, Sowdhamini R, Chandra NR, Blundell TL et al..  2015.  SInCRe-structural interactome computational resource for Mycobacterium tuberculosis.. Database (Oxford). 2015:bav060.
Parida SK, Kalia S, Pandit A, Nayak P, Singh RKushal, Gaikwad K, Srivastava PShankar, Singh NK, Mohapatra T.  2016.  Single nucleotide polymorphism in sugar pathway and disease resistance genes in sugarcane.. Plant Cell Rep. 35(8):1629-53.
Bhatia S, Krishnamoorthy G, Udgaonkar JB.  2018.  Site-specific time-resolved FRET reveals local variations in the unfolding mechanism in an apparently two-state protein unfolding transition.. Phys Chem Chem Phys. 20(5):3216-3232.
Rautu SA, Rowlands G, Turner MS.  2018.  Size-dependent recycling of membrane clusters. EPL (Europhysics Letters). 121(5)
Srinivasan U, Quader S.  2019.  Size–logging interactions and population dynamics in tropical understorey birds. Current Science. 116(5):795-801.
Panas D, Amin H, Maccione A, Muthmann O, van Rossum M, Berdondini L, Hennig MH.  2015.  Sloppiness in spontaneously active neuronal networks.. J Neurosci. 35(22):8480-92.
Sathe M, Muthukrishnan G, Rae J, Disanza A, Thattai M, Scita G, Parton RG, Mayor S.  2018.  Small GTPases and BAR domain proteins regulate branched actin polymerisation for clathrin and dynamin-independent endocytosis.. Nat Commun. 9(1):1835.
Nilofer C, Sukhwal A, Mohanapriya A, Sakharkar MKishore, Kangueane P.  2019.  Small protein-protein interfaces rich in electrostatic are often linked to regulatory function.. J Biomol Struct Dyn. :1-20.
George EA, Brockmann A.  2019.  Social modulation of individual differences in dance communication in honey bees. Behavioral Ecology and Sociobiology. 74
Garg KM, Chattopadhyay B, Ramakrishnan U.  2018.  Social structure of the harem-forming promiscuous fruit bat,, is the harem truly important? R Soc Open Sci. 5(2):172024.
Darling ES, McClanahan TR, Maina J, Gurney GG, Graham NAJ, Januchowski-Hartley F, Cinner JE, Mora C, Hicks CC, Maire E et al..  2019.  Social-environmental drivers inform strategic management of coral reefs in the Anthropocene.. Nat Ecol Evol.
Vishen ASingh, Rupprecht J-F, Shivashankar GV, Prost J, Rao M.  2018.  Soft inclusion in a confined fluctuating active gel.. Phys Rev E. 97(3-1):032602.
Risch AC, Zimmermann S, Ochoa-Hueso R, Schütz M, Frey B, Firn JL, Fay PA, Hagedorn F, Borer ET, Seabloom EW et al..  2019.  Soil net nitrogen mineralisation across global grasslands.. Nat Commun. 10(1):4981.
Tiruvaimozhi YV, Sankaran M.  2019.  Soil respiration in a tropical montane grassland ecosystem is largely heterotroph-driven and increases under simulated warming. Agricultural and Forest Meteorology. 276-277
Dohn J, Augustine DJ, Hanan NP, Ratnam J, Sankaran M.  2017.  Spatial vegetation patterns and neighborhood competition among woody plants in an East African savanna.. Ecology.
K Karanth U, Srivathsa A, Vasudev D, Puri M, Parameshwaran R, N Kumar S.  2017.  Spatio-temporal interactions facilitate large carnivore sympatry across a resource gradient.. Proc Biol Sci. 284(1848)
Naveenkumar N, Sowdhamini R, Srinivasan N.  2019.  Specialized structural and functional roles of residues selectively conserved in subfamilies of the pleckstrin homology domain family.. FEBS Open Bio.
Streinzer M, Chakravorty J, Neumayer J, Megu K, Narah J, Schmitt T, Bharti H, Spaethe J, Brockmann A.  2019.  Species composition and elevational distribution of bumble bees (Hymenoptera, Apidae, Latreille) in the East Himalaya, Arunachal Pradesh, India.. Zookeys. 851:71-89.
Vishwanath S, Sukhwal A, Sowdhamini R, Srinivasan N.  2017.  Specificity and stability of transient protein-protein interactions.. Curr Opin Struct Biol. 44:77-86.
Muthmann J-O, Amin H, Sernagor E, Maccione A, Panas D, Berdondini L, Bhalla US, Hennig MH.  2015.  Spike Detection for Large Neural Populations Using High Density Multielectrode Arrays.. Front Neuroinform. 9:28.
Thottacherry JJose, Sathe M, Prabhakara C, Mayor S.  2019.  Spoiled for Choice: Diverse Endocytic Pathways Function at the Cell Surface.. Annu Rev Cell Dev Biol. 35:55-84.
Chakraborty S, Hasan G.  2017.  Spontaneous Ca(2+) Influx in Drosophila Pupal Neurons Is Modulated by IP3-Receptor Function and Influences Maturation of the Flight Circuit.. Front Mol Neurosci. 10:111.
Gopurappilly R, Deb BKumar, Chakraborty P, Hasan G.  2018.  Stable Knockdown in Self-Renewing Human Neural Precursors Promotes Premature Neural Differentiation.. Front Mol Neurosci. 11:178.
Mani S, Thattai M.  2016.  Stacking the odds for Golgi cisternal maturation.. Elife. 5
Gardner B, Sollmann R, N Kumar S, Jathanna D, K Karanth U.  2018.  State space and movement specification in open population spatial capture-recapture models.. Ecol Evol. 8(20):10336-10344.
Bhattacharya M, Isvaran K, Balakrishnan R.  2017.  A statistical approach to understanding reproductive isolation in two sympatric species of tree crickets.. J Exp Biol. 220(Pt 7):1222-1232.
Aghera N, Udgaonkar JB.  2017.  Stepwise Assembly of β-Sheet Structure during the Folding of an SH3 Domain Revealed by a Pulsed Hydrogen Exchange Mass Spectrometry Study.. Biochemistry.
Deb BK, Pathak T, Hasan G.  2016.  Store-independent modulation of Ca(2+) entry through Orai by Septin 7.. Nat Commun. 7
Chakraborty S, Hasan G.  2018.  Store-Operated Ca Entry in Drosophila Primary Neuronal Cultures.. Methods Mol Biol. 1843:125-136.
Pathak T, Agrawal T, Richhariya S, Sadaf S, Hasan G.  2015.  Store-Operated Calcium Entry through Orai Is Required for Transcriptional Maturation of the Flight Circuit in Drosophila.. J Neurosci. 35(40):13784-99.
Naskar S, Chattarji S.  2019.  Stress Elicits Contrasting Effects on the Structure and Number of Astrocytes in the Amygdala versus Hippocampus.. eNeuro. 6(1)
Yasmin F, Colangeli R, Morena M, Filipski S, van der Stelt M, Pittman QJ, Hillard CJ, G Teskey C, McEwen BS, Hill MN et al..  2020.  Stress-induced modulation of endocannabinoid signaling leads to delayed strengthening of synaptic connectivity in the amygdala.. Proc Natl Acad Sci U S A. 117(1):650-655.
Coverdale TC, McGeary IJ, O'Connell RD, Palmer TM, , Sankaran M, Augustine DJ, Ford AT, Pringle RM.  2019.  Strong but opposing effects of associational resistance and susceptibility on defense phenotype in an African savanna plant. OIKOS.
Surana P, Gowda CM, Tripathi V, Broday L, Das R.  2017.  Structural and functional analysis of SMO-1, the SUMO homolog in Caenorhabditis elegans.. PLoS One. 12(10):e0186622.
Rakesh R, Joseph APraveen, Bhaskara RM, Srinivasan N.  2016.  Structural and mechanistic insights into human splicing factor SF3b complex derived using an integrated approach guided by the cryo-EM density maps.. RNA Biol. 13(10):1025-1040.
Bhagavan H, Muthmann O, Brockmann A.  2016.  Structural and temporal dynamics of the bee curtain in the open-nesting honey bee species, Apis florea. Apidologie.
Jayanth N, Ogirala N, Yadav A, Puranik M.  2018.  Structural basis for substrate discrimination by E. coli repair enzyme, AlkB. RSC ADVANCES. 8(3):1281-1291.
Singh J, Udgaonkar JB.  2015.  Structural effects of multiple pathogenic mutations suggest a model for the initiation of misfolding of the prion protein.. Angew Chem Int Ed Engl. 54(26):7529-33.
Chakraborty S, Krishnan Y.  2017.  A structural map of oncomiR-1 at single-nucleotide resolution.. Nucleic Acids Res. 45(16):9694-9705.
Sengupta I, Udgaonkar JB.  2018.  Structural mechanisms of oligomer and amyloid fibril formation by the prion protein.. Chem Commun (Camb).
Rao VVHemanth, Gosavi S.  2015.  Structural Perturbations Present in the Folding Cores of Interleukin-33 and Interleukin-1β Correlate to Differences in Their Function.. J Phys Chem B. 119(34):11203-14.
Kendroud S, Bohra AA, Kuert PA, Nguyen B, Guillermin O, Sprecher SG, Reichert H, VijayRaghavan K, Hartenstein V.  2018.  Structure and development of the subesophageal zone of the Drosophila brain. II. Sensory compartments.. J Comp Neurol. 526(1):33-58.
Nirwan N, Itoh Y, Singh P, Bandyopadhyay S, Vinothkumar KR, Amunts A, Saikrishnan K.  2019.  Structure-based mechanism for activation of the AAA+ GTPase McrB by the endonuclease McrC.. Nat Commun. 10(1):3058.
Srivathsa A, Puri M, Kumar NS, Jathanna D, Karanth KU.  2018.  Substituting space for time: Empirical evaluation of spatial replication as a surrogate for temporal replication in occupancy modelling . JOURNAL OF APPLIED ECOLOGY . 55(55 ):754-765.
Singh D, Bhalla USingh.  2018.  Subunit exchange enhances information retention by CaMKII in dendritic spines.. Elife. 7
Gershenson A, Gosavi S, Faccioli P, Wintrode PL.  2020.  Successes and challenges in simulating the folding of large proteins.. J Biol Chem. 295(1):15-33.
Osuri AM, chakravarthy D, Mudappa D, Raman STR, Ayyappan N, Muthuramkumar S, Parthasarathy N.  2017.  Successional status, seed dispersal mode and overstorey species influence tree regeneration in tropical rain-forest fragments in Western Ghats, India. Journal of Tropical Ecology. 33(4):270-284.
Brockmann A, Basu P, Shakeel M, Murata S, Murashima N, Boyapati RKumar, Prabhu NG, Herman JJ, Tanimura T.  2018.  Sugar Intake Elicits Intelligent Searching Behavior in Flies and Honey Bees.. Front Behav Neurosci. 12:280.
Dhanyasi N, Segal D, Shimoni E, Shinder V, Shilo B-Z, VijayRaghavan K, Schejter ED.  2015.  Surface apposition and multiple cell contacts promote myoblast fusion in Drosophila flight muscles.. J Cell Biol. 211(1):191-203.
Sundaramurthy V, Korf H, Singla A, Scherr N, Nguyen L, Ferrari G, Landmann R, Huygen K, Pieters J.  2017.  Survival of Mycobacterium tuberculosis and Mycobacterium bovis BCG in lysosomes in vivo.. Microbes Infect. 19(11):515-526.
Rodrigues C, Pattabiraman C, Vijaykumar A, Arora R, Narayana SMysore, Kumar RV, Notani D, Varga-Weisz P, Krishna S.  2019.  A SUV39H1-low chromatin state characterises and promotes migratory properties of cervical cancer cells.. Exp Cell Res.
Yapo C, Nair AG, Kotaleski JHellgren, Vincent P, Castro LRV.  2018.  Switch-like PKA responses in the nucleus of striatal neurons.. J Cell Sci.
Bhalla USingh.  2017.  Synaptic input sequence discrimination on behavioral time-scales mediated by reaction-diffusion chemistry in dendrites.. Elife. 6
Kundu S, Ganguly A, Chakraborty TSubhra, Kumar A, Siddiqi O.  2016.  Synergism and Combinatorial Coding for Binary Odor Mixture Perception in Drosophila.. eNeuro. 3(4)
Dinesh KP, Vijayakumar SP, Channakeshavamurthy BH, Torsekar VR, Kulkarni NU, Shanker K.  2015.  Systematic status of Fejervarya ((Amphibia, Anura, Dicroglossidae) from South and SE Asia with the description of a new species from the Western Ghats of Peninsular India.. Zootaxa. 3999(1):79-94.
Giri VB, Chaitanya R, Mahony S, Lalrounga S, Lalrinchhana C, Das A, Sarkar V, Karanth P, Deepak V.  2019.  On the systematic status of the genus Oriocalotes Günther, 1864 (Squamata: Agamidae: Draconinae) with the description of a new species from Mizoram state, Northeast India.. Zootaxa. 4638(4):zootaxa.4638.4.1.
Deepak V., Giri VB, Asif M, Dutta SKumar, Vyas R, Zambre AM, Bhosale H, K. Karanth P.  2016.  Systematics and phylogeny of Sitana (Reptilia: Agamidae) of Peninsular India, with the description of one new genus and five new species. Contributions to Zoology. 85(1):67-111.
Shrivastava R, Köster D, Kalme S, Mayor S, Neerathilingam M.  2015.  Tailor-made ezrin actin binding domain to probe its interaction with actin in-vitro.. PLoS One. 10(4):e0123428.
Ghosh P, Grellscheid SNagaraja, Sowdhamini R.  2016.  A tale of two paralogs: human Transformer2 proteins with differential RNA-binding affinities.. J Biomol Struct Dyn. 34(9):1979-86.
Mishra R, Kohli S, Malhotra N, Bandyopadhyay P, Mehta M, Munshi MH, Adiga V, Ahuja VKamal, Shandil RK, Rajmani RS et al..  2019.  Targeting redox heterogeneity to counteract drug tolerance in replicating .. Sci Transl Med. 11(518)
Agavekar G, Garcia FHita, Economo EP.  2017.  Taxonomic overview of the hyperdiverse ant genus Tetramorium Mayr (Hymenoptera, Formicidae) in India with descriptions and X-ray microtomography of two new species from the Andaman Islands.. PeerJ. 5:e3800.
Datta-Roy A, Deepak V., Chaitanya R, Murthy C, Bhosale H, Lajmi A, K. Karanth P, Kunte K, Giri V.  2017.  On the taxonomic status of Eurylepis poonaensis (Squamata: Scincidae): resolving a long-standing conundrum. SALAMANDRA. 53(3):389-397.
McClanahan TR, Darling ES, Maina JM, Muthiga NA, D'agata S, Jupiter SD, Arthur R, Wilson SK, Mangubhai S, Nand Y et al..  2019.  Temperature patterns and mechanisms influencing coral bleaching during the 2016 El Nino. Nature Climate Change. 9:845–851.
Wigley BJ, Coetsee C, Augustine DJ, Ratnam J, Hattas D, Sankaran M..  2019.  A thorny issue: Woody plant defence and growth in an East African savanna. JOURNAL OF ECOLOGY. 107(4):1839-1851.
Vinekar RS, Sowdhamini R.  2016.  Three-dimensional modelling of the voltage-gated sodium ion channel from Anopheles gambiae reveals spatial clustering of evolutionarily conserved acidic residues at the extracellular sites.. Curr Neuropharmacol.
Neelamraju S, Oligschleger C, J Schön C.  2017.  The threshold algorithm: Description of the methodology and new developments.. J Chem Phys. 147(15):152713.
Heltberg ML, Krishna S, Jensen MH.  2017.  Time Correlations in Mode Hopping of Coupled Oscillators. Journal of Statistical Physics. 167(3-4):792–805.
Jain R, Brockmann A.  2018.  Time-restricted foraging under natural light/dark condition shifts the molecular clock in the honey bee, Apis mellifera.. Chronobiol Int. :1-12.
Chakraborty P, Chattarji S.  2019.  Timing is everything: differential effects of chronic stress on fear extinction.. Psychopharmacology (Berl). 236(1):73-86.
Cockcroft S, Raghu P.  2016.  Topological organisation of the phosphatidylinositol 4,5-bisphosphate-phospholipase C resynthesis cycle: PITPs bridge the ER-PM gap.. Biochem J. 473(23):4289-4310.

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