[ Author(Desc)] Title Type Year
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Taylor MJ, Husain K, Gartner ZJ, Mayor S, Vale RD.  2017.  A DNA-Based T Cell Receptor Reveals a Role for Receptor Clustering in Ligand Discrimination.. Cell. 169(1):108-119.e20.
Terse VL, Gosavi S.  2021.  The molecular mechanism of domain-swapping of the C-terminal domain of the SARS coronavirus main protease. Biophys J. 120(3):504-516.
Thakur R, Naik A, Panda A, Raghu P.  2019.  Regulation of Membrane Turnover by Phosphatidic Acid: Cellular Functions and Disease Implications.. Front Cell Dev Biol. 7:83.
Thakur R, Panda A, Coessens E, Raj N, Yadav S, Balakrishnan S, Zhang Q, Georgiev P, Basak B, Pasricha R et al..  2016.  Phospholipase D activity couples plasma membrane endocytosis with retromer dependent recycling.. Elife. 5
Thakur S, Neogi S.  2020.  Effect of doped ZnO nanoparticles on bacterial cell morphology and biochemical composition. APPLIED NANOSCIENCE.
Thattai M.  2019.  How contraction has shaped evolution.. Elife. 8
Thattai M.  2017.  Organelle acidification: an ancient cellular leak detector.. BMC Biol. 15(1):51.
Thattai M.  2016.  Universal Poisson Statistics of mRNAs with Complex Decay Pathways.. Biophys J. 110(2):301-5.
Thatte P, Chandramouli A, Tyagi A, Patel K, Baro B, Chhattani H, Ramakrishnan U.  2019.  Human footprint differentially impacts genetic connectivity of four wide‐ranging mammals in a fragmented landscape. Diversity and Distribution.
Thatte P, Chandramouli A, Tyagi A, Patel K, Baro P, Chhattani H, Ramakrishnan U.  2020.  Human footprint differentially impacts genetic connectivity of four wide-ranging mammals in a fragmented landscape. DIVERSITY AND DISTRIBUTIONS. 26(3):299-314.
Thatte P, Joshi A, Vaidyanathan S, Landguth E, Ramakrishnan U.  2018.  Maintaining tiger connectivity and minimizing extinction into the next century: Insights from landscape genetics and spatially-explicit simulations . BIOLOGICAL CONSERVATION . 218:181-191.
Thillaiappan NBabu, Chakraborty P, Hasan G, Taylor CW.  2019.  IP3 receptors and Ca2+ entry. Biochim Biophys Acta Mol Cell Res. 1866(7):1092-1100.
Thimmegowda GG, Mullen S, Sottilare K, Sharma A, Mohanta SSoham, Brockmann A, Dhandapany PS, Olsson SB.  2020.  A field-based quantitative analysis of sublethal effects of air pollution on pollinators.. Proc Natl Acad Sci U S A.
Thomas P, Pranatharthi A, Ross C, Srivastava S.  2019.  RhoC: a fascinating journey from a cytoskeletal organizer to a Cancer stem cell therapeutic target.. J Exp Clin Cancer Res. 38(1):328.
Thorpe CJ, Lewis TR, Kulkarni S, Watve A, Gaitonde N, Pryce D, Davies L, Bilton DT, Knight ME.  2018.  Micro-habitat distribution drives patch quality for sub-tropical rocky plateau amphibians in the northern Western Ghats, India.. PLoS One. 13(3):e0194810.
Thottacherry JJose, Kosmalska AJoanna, Kumar A, Vishen ASingh, Elosegui-Artola A, Pradhan S, Sharma S, Singh PP, Guadamillas MC, Chaudhary N et al..  2018.  Mechanochemical feedback control of dynamin independent endocytosis modulates membrane tension in adherent cells.. Nat Commun. 9(1):4217.
Thottacherry JJose, Sathe M, Prabhakara C, Mayor S.  2019.  Spoiled for Choice: Diverse Endocytic Pathways Function at the Cell Surface.. Annu Rev Cell Dev Biol. 35:55-84.
Thutupalli S, Geyer D, Singh R, Adhikari R, Stone HA.  2018.  Flow-induced phase separation of active particles is controlled by boundary conditions.. Proc Natl Acad Sci U S A.
Thutupalli S, Uppaluri S, Constable GWA, Levin SA, Stone HA, Tarnita CE, Brangwynne CP.  2017.  Farming and public goods production in Caenorhabditis elegans populations.. Proc Natl Acad Sci U S A. 114(9):2289-2294.
Till SM, Asiminas A, Jackson AD, Katsanevaki D, Barnes SA, Osterweil EK, Bear MF, Chattarji S, Wood ER, Wyllie DJA et al..  2015.  Conserved hippocampal cellular pathophysiology but distinct behavioural deficits in a new rat model of FXS.. Hum Mol Genet. 24(21):5977-84.
Tirumalai V, Swetha C, Nair A, Pandit A, Shivaprasad PV.  2019.  miR828 and miR858 regulate VvMYB114 to promote anthocyanin and flavonol accumulation in grapes.. J Exp Bot.
Tirumalai V, Prasad M, Shivaprasad PV.  2020.  RNA Blot Analysis for the Detection and Quantification of Plant MicroRNAs.. J Vis Exp. (161)
Tiruvaimozhi YV, Varma V, Sankaran M.  2018.  Nitrogen fixation ability explains leaf chemistry and arbuscular mycorrhizal responses to fertilization . PLANT ECOLOGY . 219(4):391-401.
Tiruvaimozhi YV, Sankaran M.  2019.  Soil respiration in a tropical montane grassland ecosystem is largely heterotroph-driven and increases under simulated warming. Agricultural and Forest Meteorology. 276-277
Tiwari V, Karpe SD, Sowdhamini R.  2019.  Topology prediction of insect olfactory receptors.. Curr Opin Struct Biol. 55:194-203.
Tomar A, Polygalov D, Chattarji S, McHugh TJ.  2015.  The dynamic impact of repeated stress on the hippocampal spatial map.. Hippocampus. 25(1):38-50.
Toniolo C, Crisma M, Formaggio F, Alemán C, Ramakrishnan C, Kalmankar N, Balaram P.  2017.  Intramolecular Backbone···Backbone Hydrogen Bonds in Polypeptide Conformations. The Other Way Around: ε-Turn.. Biopolymers. 108(1)
Toussaint EFA, Morinière J, Müller CJ, Kunte K, Turlin B, Axel Hausmann, Balke M.  2015.  Comparative molecular species delimitation in the charismatic Nawab butterflies (Nymphalidae, Charaxinae, Polyura).. Mol Phylogenet Evol. 91:194-209.
Tran TMinh, Ma Z, Triebl A, Nath S, Cheng Y, Gong B-Q, Han X, Wang J, Li J-F, Wenk MR et al..  2020.  The bacterial quorum sensing signal DSF hijacks sterol biosynthesis to suppress plant innate immunity.. Life Sci Alliance. 3(10)
Tripathi V, Chatterjee KSankar, Das R.  2019.  Casein kinase-2 mediated phosphorylation increases the SUMO-dependent activity of the cytomegalovirus transactivator IE2.. J Biol Chem.
Tripathi V, Das R.  2020.  A Fluorescence-Based Assay to Monitor SUMOylation in Real-Time.. Curr Protoc Protein Sci. 101(1):e111.
Trivedi D, Cm V, Bisht K, Janardan V, Pandit A, Basak B, H S, Ramesh N, Raghu P.  2020.  A genome engineering resource to uncover principles of cellular organization and tissue architecture by lipid signalling.. Elife. 9
Trivedi DV, Nag S, Spudich A, Ruppel KM, Spudich JA.  2020.  The Myosin Family of Mechanoenzymes: From Mechanisms to Therapeutic Approaches.. Annu Rev Biochem.
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Vaishnav A, Shukla AK, Sharma A, Kumar R, Choudhary DK.  2019.  Endophytic Bacteria in Plant Salt Stress Tolerance: Current and Future Prospects. Journal of Plant Growth Regulation. 38(2):650–668.
Varahan S, Sinha V, Walvekar A, Krishna S, Laxman S.  2020.  Resource plasticity-driven carbon-nitrogen budgeting enables specialization and division of labor in a clonal community . Elife. 9
Varahan S, Walvekar A, Sinha V, Krishna S, Laxman S.  2019.  Metabolic constraints drive self-organization of specialized cell groups.. Elife. 8
Varghese PC, Rajam SM, Nandy D, Jory A, Mukherjee A, Dutta D.  2021.  Histone chaperone APLF level dictate implantation of mouse embryo. J Cell Sci. 134(1)
Varma V., Ratnam J., Viswanathan V., Osuri A.M, Biesmeijer J.C, Madhusudan M.D, Sankaran M..  2015.  Perceptions of priority issues in the conservation of biodiversity and ecosystems in India. Biological Conservation . 187:201-211.
Varma V, Iyengar SB, Sankaran M.  2016.  Effects of nutrient addition and soil drainage on germination of N-fixing and non-N-fixing tropical dry forest tree species . Plant Ecology. 217(1043–1054):1043–1054.
Varma V, Catherin AM, Sankaran M.  2018.  Effects of increased N and P availability on biomass allocation and root carbohydrate reserves differ between N-fixing and non-N-fixing savanna tree seedlings.. Ecol Evol. 8(16):8467-8476.
Varudkar A, Ramakrishnan U.  2015.  Commensalism facilitates gene flow in mountains: a comparison between two Rattus species.. Heredity (Edinb). 115(3):253-61.
Varudkar A, Ramakrishnan U.  2018.  Gut microflora may facilitate adaptation to anthropic habitat: A comparative study in .. Ecol Evol. 8(13):6463-6472.
Veetil RT, Malhotra N, Dubey A, Seshasayee ASai Narain.  2020.  Laboratory Evolution Experiments Help Identify a Predominant Region of Constitutive Stable DNA Replication Initiation.. mSphere. 5(1)
Veldman JW, Aleman JC, Alvarado ST, T Anderson M, Archibald S, Bond WJ, Boutton TW, Buchmann N, Buisson E, Canadell JG et al..  2019.  Comment on "The global tree restoration potential".. Science. 366(6463)
Velho N, Srinivasan U, Singh P, Laurance WF.  2016.  Large mammal use of protected and community-managed lands in a biodiversity hotspot. ANIMAL CONSERVATION. 19(2):199-208.
Venkatasubramani JPriya, Subramanyam P, Pal R, Reddy BK, Srinivasan DJeyalakshm, Chattarji S, Iossifov I, Klann E, Bhattacharya A.  2020.  N-terminal variant Asp14Asn of the human p70 S6 Kinase 1 enhances translational signaling causing different effects in developing and mature neuronal cells.. Neurobiol Learn Mem. 171:107203.
Venugopal N, Ghosh A, Gala H, Aloysius A, Vyas N, Dhawan J.  2020.  The primary cilium dampens proliferative signaling and represses a G2/M transcriptional network in quiescent myoblasts.. BMC Mol Cell Biol. 21(1):25.
Vijayakrishnan S, Kumar MAnanda, Umapathy G, Kumar V, Sinha A.  2018.  Physiological stress responses in wild Asian elephants Elephas maximus in a human-dominated landscape in the Western Ghats, southern India.. Gen Comp Endocrinol. 266:150-156.
Vijayaraghavareddy P, Akula NN, Vemanna RS, Math RGH, Shinde DD, Yin X, Struik PC, Makarla U, Sreeman S.  2021.  Metabolome profiling reveals impact of water limitation on grain filling in contrasting rice genotypes.. Plant Physiol Biochem. 162:690-698.
Vijayasarathy M, Balaram P.  2019.  Cone snail prolyl-4-hydroxylase α-subunit sequences derived from transcriptomic data and mass spectrometric analysis of variable proline hydroxylation in C. amadis venom.. J Proteomics. 194:37-48.
Vijayasarathy M, Balaram P.  2018.  Mass spectrometric identification of bromotryptophan containing conotoxin sequences from the venom of C. amadis.. Toxicon. 144:68-74.
Vijayasarathy M, Basheer SM, Balaram P.  2018.  Cone Snail Glutaminyl Cyclase Sequences from Transcriptomic Analysis and Mass Spectrometric Characterization of Two Pyroglutamyl Conotoxins.. J Proteome Res. 17(8):2695-2703.
Vinekar RS, Sowdhamini R.  2016.  Three-dimensional modelling of the voltage-gated sodium ion channel from Anopheles gambiae reveals spatial clustering of evolutionarily conserved acidic residues at the extracellular sites.. Curr Neuropharmacol.
Vinothkumar KR, Arya C, Ramanathan G, Subramanian R.  2020.  Comparison of CryoEM and X-ray structures of dimethylformamidase.. Prog Biophys Mol Biol.
Vishen ASingh, Rupprecht J-F, Shivashankar GV, Prost J, Rao M.  2018.  Soft inclusion in a confined fluctuating active gel.. Phys Rev E. 97(3-1):032602.
Vishen ASingh, Prost J, Rao M.  2019.  Breakdown of effective temperature, power law interactions, and self-propulsion in a momentum-conserving active fluid.. Phys Rev E. 100(6-1):062602.
Vishwanath S, Sukhwal A, Sowdhamini R, Srinivasan N.  2017.  Specificity and stability of transient protein-protein interactions.. Curr Opin Struct Biol. 44:77-86.
Viswan NA, HarshaRani GVani, Stefan MI, Bhalla US.  2018.  FindSim: A Framework for Integrating Neuronal Data and Signaling Models.. Front Neuroinform. 12:38.
Viswanath B, Rao NP, Narayanaswamy JC, Sivakumar PT, Kandasamy A, Kesavan M, Mehta UMeherwan, Venkatasubramanian G, John JP, Mukherjee O et al..  2018.  Discovery biology of neuropsychiatric syndromes (DBNS): a center for integrating clinical medicine and basic science.. BMC Psychiatry. 18(1):106.
Viswanath B, Jose SP, Squassina A, Thirthalli J, Purushottam M, Mukherjee O, Vladimirov V, Patrinos GP, Del Zompo M, Jain S.  2015.  Cellular models to study bipolar disorder: A systematic review.. J Affect Disord. 184:36-50.
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Walavalkar K, Saravanan B, Singh AKumar, Jayani RSingh, Nair A, Farooq U, Islam Z, Soota D, Mann R, Shivaprasad PV et al..  2020.  A rare variant of African ancestry activates 8q24 lncRNA hub by modulating cancer associated enhancer.. Nat Commun. 11(1):3598.
Walavalkar K, Notani D.  2020.  Beyond the coding genome: non-coding mutations and cancer.. Front Biosci (Landmark Ed). 25:1828-1838.
Wang T, Goyal A, Dubinkina V, Maslov S.  2019.  Evidence for a multi-level trophic organization of the human gut microbiome.. PLoS Comput Biol. 15(12):e1007524.
Wang ET, J Taliaferro M, Lee J-A, Sudhakaran IP, Rossoll W, Gross C, Moss KR, Bassell GJ.  2016.  Dysregulation of mRNA Localization and Translation in Genetic Disease.. J Neurosci. 36(45):11418-11426.
Wegener C, Hasan G.  2019.  ER-Ca2+ sensor STIM regulates neuropeptides required for development under nutrient restriction in Drosophila.. PLoS One. 14(7):e0219719.
Weinert T, Olieric V, Waltersperger S, Panepucci E, Chen L, Zhang H, Zhou D, Rose J, Ebihara A, Kuramitsu S et al..  2015.  Fast native-SAD phasing for routine macromolecular structure determination.. Nat Methods. 12(2):131-3.
Wickramasinghe N, Robin VV, Ramakrishnan U, Reddy S, Seneviratne SS.  2017.  Non-sister Sri Lankan white-eyes (genus Zosterops) are a result of independent colonizations.. PLoS One. 12(8):e0181441.
Wigley BJ, Fritz H, Coetsee C.  2018.  Defence strategies in African savanna trees.. Oecologia.
Wigley BJ, Slingsby JA, Diaz S, Bond WJ, Fritz H, Coetsee C.  2016.  Leaf traits of African woody savanna species across climate and soil fertility gradients: evidence for conservative versus acquisitive resource-use strategies. Journal of Ecology.
Wigley BJ, Coetsee C, Augustine DJ, Ratnam J, Hattas D, Sankaran M..  2019.  A thorny issue: Woody plant defence and growth in an East African savanna. JOURNAL OF ECOLOGY. 107(4):1839-1851.
Wigley BJ, Coetsee C, Kruger LM, Ratnam J, Sankaran M.  2019.  Ants, fire, and bark traits affect how African savanna trees recover following damage. BIOTROPICA.
Wigley BJ, Augustine DJ, Coetsee C, Ratnam J, Sankaran M.  2020.  Grasses continue to trump trees at soil carbon sequestration following herbivore exclusion in a semi-arid African savanna.. Ecology. :e03008.
Wigley BJ, Staver C, Zytkowiak R, Jagodzinski AM, Wigley-Coetsee C.  2019.  Root trait variation in African savannas. Plant and Soil. 441(1-2):555–565.
Willaert B, Suyesh R, Garg S, Giri VB, Bee MA, Biju SD.  2016.  A unique mating strategy without physical contact during fertilization in Bombay Night Frogs (Nyctibatrachus humayuni) with the description of a new form of amplexus and female call.. PeerJ. 4:e2117.
Willemen L, Barger NN, Brink Bten, Cantele M, Erasmus BFN, Fisher JL, Gardner T, Holland TG, Kohler F, Kotiaho JS et al..  2020.  How to halt the global decline of lands. NATURE SUSTAINABILITY.
Winata CLanny, Kondrychyn I, Korzh V.  2015.  Changing Faces of Transcriptional Regulation Reflected by Zic3.. Curr Genomics. 16(2):117-27.
Woltering JM, Irisarri I, Ericsson R, Joss JMP, Sordino P, Meyer A.  2020.  Sarcopterygian fin ontogeny elucidates the origin of hands with digits.. Sci Adv. 6(34):eabc3510.
Wordley CFR, Sankaran M, Mudappa D, Altringham JD.  2017.  Bats in the Ghats: Agricultural intensification reduces functional diversity and increases trait filtering in a biodiversity hotspot in India. Biological Conservation. 210:48-55.
Wordley CFR, Sankaran M, Mudappa D, Altringham JD.  2015.  Landscape scale habitat suitability modelling of bats in the Western Ghats of India: Bats like something in their tea. Biological Conservation. 191:529–536.
Wordley CFR, Sankaran M, Mudappa D, Altringham JD.  2018.  Heard but not seen: Comparing bat assemblages and study methods in a mosaic landscape in the Western Ghats of India.. Ecol Evol. 8(8):3883-3894.
Wyart C, Thirumalai V.  2019.  Building behaviors, one layer at a time.. Elife. 8
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Yadahalli S, Gosavi S.  2017.  Packing energetics determine the folding routes of the RNase-H proteins.. Phys Chem Chem Phys.
Yadahalli S, Gosavi S.  2016.  Functionally Relevant Specific Packing Can Determine Protein Folding Routes.. J Mol Biol. 428(2 Pt B):509-21.
Yadahalli S, Li J, Lane DP, Gosavi S, Verma CS.  2017.  Characterizing the conformational landscape of MDM2-binding p53 peptides using Molecular Dynamics simulations.. Sci Rep. 7(1):15600.
Yadav S, Garner K, Georgiev P, Li M, Gomez-Espinosa E, Panda A, Mathre S, Okkenhaug H, Cockcroft S, Raghu P.  2015.  RDGBα, a PtdIns-PtdOH transfer protein, regulates G-protein-coupled PtdIns(4,5)P2 signalling during Drosophila phototransduction.. J Cell Sci. 128(17):3330-44.
Yadav S, Rathod P, Alcoverro T, Arthur R.  2016.  Choice and destiny: the substrate composition and mechanical stability of settlement structures can mediate coral recruit fate in post-bleached reefs. Coral Reefs. 35(1):211-222.
Yadav S, Thakur R, Georgiev P, Deivasigamani S, Krishnan H, Ratnaparkhi G, Raghu P.  2018.  RDGBα localization and function at membrane contact sites is regulated by FFAT-VAP interactions.. J Cell Sci. 131(1)
Yadav S, Cockcroft S, Raghu P.  2016.  The Drosophila photoreceptor as a model system for studying signalling at membrane contact sites.. Biochem Soc Trans. 44(2):447-51.
Yamamoto J, Adachi K, Bower JR, Matsui H, Nakaya M, Ohtani R, Puneeta P, Suzuki S, Tokioka S, Vijai D et al..  2019.  Close-up observations on the spawning behavior of a captive Japanese flying squid (Todarodes pacificus).. Sci Rep. 9(1):19739.
Yang L, Ravikanthachari N, Mariño-Pérez R, Deshmukh R, Wu M, Rosenstein A, Kunte K, Song H, Andolfatto P.  2019.  Predictability in the evolution of Orthopteran cardenolide insensitivity.. Philos Trans R Soc Lond B Biol Sci. 374(1777):20180246.
Yapo C, Nair AG, Kotaleski JHellgren, Vincent P, Castro LRV.  2018.  Switch-like PKA responses in the nucleus of striatal neurons.. J Cell Sci.
Yapo C, Nair AG, Clement L, Castro LR, Kotaleski JHellgren, Vincent P.  2017.  Detection of phasic dopamine by D1 and D2 striatal medium spiny neurons.. J Physiol.
Yasmin F, Colangeli R, Morena M, Filipski S, van der Stelt M, Pittman QJ, Hillard CJ, G Teskey C, McEwen BS, Hill MN et al..  2020.  Stress-induced modulation of endocannabinoid signaling leads to delayed strengthening of synaptic connectivity in the amygdala.. Proc Natl Acad Sci U S A. 117(1):650-655.
Yasmin F, Saxena K, McEwen BS, Chattarji S.  2016.  The delayed strengthening of synaptic connectivity in the amygdala depends on NMDA receptor activation during acute stress.. Physiol Rep. 4(20)

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