[ Author(Asc)] Title Type Year
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J
Joshi S, Gassah R, Ismavel VAnand.  2021.  Dragonflies and damselflies (Insecta: Odonata) of Karimganj District, Assam, India with four additions to the Indian checklist. ORIENTAL INSECTS .
Joshi AA, Ratnam J, Sankaran M.  2020.  Frost maintains forests and grasslands as alternate states in a montane tropical forest-grassland mosaic; but alien tree invasion and warming can disrupt this balance. JOURNAL OF ECOLOGY. 108(1):122-132.
Joshi S, van der Poorten N, Sumanapala A, Nielsen E, Patel J, Nielsen B, Sawant D, Sherif M.  2020.  New records of polymorphism in Asian libellulid dragonflies (Insecta: Odonata). INTERNATIONAL JOURNAL OF ODONATOLOGY. 23(4):337-356.
Joshi AG, Praveen P, Ramakrishnan U, Sowdhamini R.  2022.  Draft genome sequence of an invasive plant .. Bioinformation. 18(9):739-741.
Joshi S, Kosterin OE, Kunte K.  2016.  New status for Fraser's forgotten Aciagrion approximans krishna, stat. nov (Odonata: Zygoptera: Coenagrionidae) from the Western Ghats of India. International Journal of Odonatology. 19(1-2):41-51.
Joshi S, Sawant D, Ogale H, Kunte K.  2022.  Burmagomphus chaukulensis, a new species of dragonfly (Odonata: Anisoptera: Gomphidae) from the Western Ghats, Maharashtra, India. ZOOTAXA . 5133(3):413-430.
Joshi S, Agashe D.  2020.  Ontogenic colour change, survival, and mating in the damselfly Agriocnemis pygmaea Rambur (Insecta: Odonata). ECOLOGICAL ENTOMOLOGY.
Joshi AG, Harini K, Meenakshi I, K Shafi M, Pasha SNaseer, Mahita J, Sajeevan RSivarajan, Karpe SD, Ghosh P, Nitish S et al..  2020.  A knowledge-driven protocol for prediction of proteins of interest with an emphasis on biosynthetic pathways.. MethodsX. 7:101053.
Joshi S, Sawant D.  2020.  Description of Bradinopyga konkanensis sp. nov. (Odonata: Anisoptera: Libellulidae) from the coastal region of Maharashtra, India. ZOOTAXA. 4779(1):65-78.
Joshi A, Ratnam J, Paramjyothi H, Sankaran M.  2024.  Climate and vegetation collectively drive soil respiration in montane forest-grassland landscapes of the southern Western Ghats, India. Journal of Tropical Ecology. 40
Joshi AA, Ratnam J, Sankaran M.  2019.  Frost maintains forests and grasslands as alternate states in a montane tropical forest–grassland mosaic; but alien tree invasion and warming can disrupt this balance. JOURNAL OF ECOLOGY.
Joshi S, Mohapatra S, Kumar D, Joshi A, Iyer M, Sowdhamini R.  2025.  GenDiS3 database: census on the prevalence of protein domain superfamilies of known structure in the entire sequence database.. Database (Oxford). 2025
Joshi AA, Sankaran M, Ratnam J.  2018.  ‘Foresting’ the grassland: Historical management legacies in forest-grassland mosaics in southern India, and lessons for the conservation of tropical grassy biomes. Biological Conservation. 224:144-152.
Joseph AM, Daw S, Sadhir I, Badrinarayanan A.  2021.  Coordination between nucleotide excision repair and specialized polymerase DnaE2 action enables DNA damage survival in non-replicating bacteria. Elife.
Joseph AMary, Badrinarayanan A.  2020.  Visualizing mutagenic repair: novel insights into bacterial translesion synthesis.. FEMS Microbiol Rev.
Joseph AMary, Nahar K, Daw S, Hasan MMahbub, Lo R, Le TBK, Rahman KMiraz, Badrinarayanan A.  2022.  Mechanistic insight into the repair of C8-linked pyrrolobenzodiazepine monomer-mediated DNA damage.. RSC Med Chem. 13(12):1621-1633.
Joseph AP, Swapna LS, Rakesh R, Srinivasan N.  2016.  Use of evolutionary information in the fitting of atomic level protein models in low resolution cryo-EM map of a protein assembly improves the accuracy of the fitting.. J Struct Biol.
Johnson MK, Kottur J, Nair DT.  2019.  A polar filter in DNA polymerases prevents ribonucleotide incorporation.. Nucleic Acids Res.
John J, Bapat A, Gahlaut S, Luke N, Kumar R, Thakur Y, Mathew C, Konnur A, Namewar N, Reddy R et al..  2025.  Assessing germline mutational profile and its clinicopathological associations in Triple Negative Breast Cancer.. Cancer Genet. 296-297:65-75.
Johannes L, Parton RG, Bassereau P, Mayor S.  2015.  Building endocytic pits without clathrin.. Nat Rev Mol Cell Biol. 16(5):311-21.
Jog K, Sule M, Bopardikar I, Patankar V, Sutaria D.  2018.  Living with dolphins: Local ecological knowledge and perceptions of small cetaceans along the Sindhudurg coastline of Maharashtra, India. MARINE MAMMAL SCIENCE . 34 (2):488-498.
Jobin V, Das A, Harikrishnan CP, Chanda R, Lawrence S, Robin VV.  2023.  Patterns of understory invasion in invasive timber stands of a tropical sky island.. Ecol Evol. 13(4):e9995.
Jhawar J, Morris RG, Amith-Kumar UR, Raj MD, Rogers T, Rajendran H, Guttal V.  2020.  Noise-induced schooling of fish. NATURE PHYSICS. 16(4):488.
Jhaveri R, Cannanbilla L, Bhat KSArpitha, Sankaran M, Krishnadas M.  2024.  Anatomical traits explain drought response of seedlings from wet tropical forests.. Ecol Evol. 14(9):e70155.
Jha U, Thirumalai V.  2020.  Neuromodulatory Selection of Motor Neuron Recruitment Patterns in a Visuomotor Behavior Increases Speed.. Curr Biol.
Jha U, Kondrychyn I, Korzh V, Thirumalai V.  2021.  High behavioral variability mediated by altered neuronal excitability in mutant zebrafish.. eNeuro.
Jha A, van Zanten TS, Philippe J-M, Mayor S, Lecuit T.  2018.  Quantitative Control of GPCR Organization and Signaling by Endocytosis in Epithelial Morphogenesis.. Curr Biol.
Jha RRaj, Isvaran K.  2022.  Antelope space-use and behavior indicate multilevel responses to varying anthropogenic influences in a highly human-dominated landscape.. Ecol Evol. 12(10):e9372.
Jha V, Narjala A, Basu D, Sujith TN, Pachamuthu K, Chenna S, Nair A, Shivaprasad PV.  2021.  Essential role of γ-clade RNA-dependent RNA polymerases in rice development and yield-related traits is linked to their atypical polymerase activities regulating specific genomic regions.. New Phytol.
Jha S, Bose S, Vinothkumar KR.  2024.  Modeling Ligands into Maps Derived from Electron Cryomicroscopy.. J Vis Exp. (209)
Jethva PN, Udgaonkar JB.  2018.  The Osmolyte TMAO Modulates Protein Folding Cooperativity by Altering Global Protein Stability.. Biochemistry.
Jethva PN, Udgaonkar JB.  2017.  Modulation of the Extent of Cooperative Structural Change During Protein Folding by Chemical Denaturant.. J Phys Chem B. 121(35):8263-8275.
Jeong H, Grimes K, Rauwolf KK, Bruch P-M, Rausch T, Hasenfeld P, Benito E, Roider T, Sabarinathan R, Porubsky D et al..  2023.  Functional analysis of structural variants in single cells using Strand-seq.. Nat Biotechnol. 41:832-844.
Jeancolas C, Matsubara YJ, Vybornyi M, Lambert CN, Blokhuis A, Alline T, Griffiths AD, Ameta S, Krishna S, Nghe P.  2021.  RNA diversification by a self-reproducing ribozyme revealed by deep sequencing and kinetic modelling.. Chem Commun (Camb).
Jeancolas C, Singh AY, Jain S, Krishna S, Nghe P.  2023.  An interdisciplinary effort to understand chemical organizations at the origin of life.. iScience. 26(1):105834.
Jean-François F, Pratibha S, Baptiste R, Jean-Pierre F, Jérôme C, Deepa A, Claude E.  2025.  Is Drosophila Larval Competition Involved in Incipient Speciation? J Chem Ecol. 51(1):2.
Jean-François F, Pratibha S, Stéphane F, Enisa A, Fabrice N, Bernard M, Deepa A, Claude E.  2024.  Experimental Evolution Induced by Maternal Post-copulatory Factors in Drosophila.. Behav Genet.
Jayashree S, Murugavel P, Sowdhamini R, Srinivasan N.  2019.  Interface residues of transient protein-protein complexes have extensive intra-protein interactions apart from inter-protein interactions.. Biol Direct. 14(1):1.
Jayanth N, Ogirala N, Yadav A, Puranik M.  2018.  Structural basis for substrate discrimination by E. coli repair enzyme, AlkB. RSC ADVANCES. 8(3):1281-1291.
Jayanth N, Puranik M.  2017.  Mechanism of Discrimination of 8-Oxoguanosine versus Guanosine by Escherichia coli Fpg.. J Phys Chem B.
Jayakumar S, Hasan G.  2018.  Neuronal Calcium Signaling in Metabolic Regulation and Adaptation to Nutrient Stress.. Front Neural Circuits. 12:25.
Jayakumar S, Richhariya S, Deb BKumar, Hasan G.  2018.  A multi-component neuronal response encodes the larval decision to pupariate upon amino acid starvation.. J Neurosci.
Jayakumar S, Richhariya S, O Reddy V, Texada MJ, Hasan G.  2016.  Drosophila larval to pupal switch under nutrient stress requires IP3R/Ca(2+) signalling in glutamatergic interneurons.. Elife. 5
Jayakumar JAnand Kuma, Panicker MM.  2021.  The roles of serotonin in cell adhesion and migration, and cytoskeletal remodeling.. Cell Adh Migr. 15(1):261-271.
Jayadevan A, Nayak R, Karanth KK, Krishnaswamy J, DeFries R, K. Karanth U, Vaidyanathan S.  2020.  Navigating paved paradise: Evaluating landscape permeability to movement for large mammals in two conservation priority landscapes in India. BIOLOGICAL CONSERVATION. 247
Jayadevan A, Mukherjee S, Vanak AT.  2018.  Bush encroachment influences nocturnal rodent community and behaviour in a semi-arid grassland in Gujarat, India . Journal of Arid Environments. 153:32-38.
Javali A, Misra A, Leonavicius K, Acharya D, Vyas B, Sambasivan R.  2017.  Co-expression of Tbx6 and Sox2 identifies a novel transient neuromesoderm progenitor cell state.. Development.
Javali A, Lakshmanan V, Palakodeti D, Sambasivan R.  2020.  Modulation of β-catenin levels regulates cranial neural crest patterning and dispersal into first pharyngeal arch.. Dev Dyn.
Janardan V, Sharma S, Basu U, Raghu P.  2020.  A Genetic Screen in Drosophila To Identify Novel Regulation of Cell Growth by Phosphoinositide Signaling.. G3 (Bethesda). 10(1):57-67.
Janakiraman D.  2017.  Lévy flights in the presence of a point sink of finite strength.. Phys Rev E. 95(1-1):012154.
Jana SChandra.  2021.  Centrosome structure and biogenesis: Variations on a theme? Semin Cell Dev Biol.
Jambor H, Antonietti A, Alicea B, Audisio TL, Auer S, Bhardwaj V, Burgess SJ, Ferling I, Gazda MAnna, Hoeppner LH et al..  2021.  Creating clear and informative image-based figures for scientific publications.. PLoS Biol. 19(3):e3001161.
Jalal ASB, Tran NT, Stevenson CEM, Chimthanawala A, Badrinarayanan A, Lawson DM, Le TBK.  2021.  A CTP-dependent gating mechanism enables ParB spreading on DNA. Elife. 10(e69676)
JAK JJayakumar, Panicker MM, Basu B.  2020.  Serotonin 2A (5-HT2A) receptor affects cell-matrix adhesion and the formation and maintenance of stress fibers in HEK293 cells.. Sci Rep. 10(1):21675.
Jain A., Kunte K, Webb E.L..  2016.  Flower specialization of butterflies and impacts of non-native flower use in a transformed tropical landscape. Biological Conservation. 201:84–191.
Jain H, Ghosh S.  2024.  Imprinting reversible deformations on a compressed soft rod network. SOFT MATTER. 20(26)
Jain I, Tran PT.  2023.  Prolongation of mitosis is associated with enhanced endogenous DNA damage in fission yeast.. MicroPubl Biol. 2023
Jain D, Narayanan N, Nair DT.  2016.  Plasticity in Repressor-DNA Interactions Neutralizes Loss of Symmetry in Bipartite Operators.. J Biol Chem. 291(3):1235-42.
Jain PKumar, Jayappa S, Sairam T, Mittal A, Paul S, Rao VJ, Chittora H, Kashyap DK, Palakodeti D, Thangaraj K et al..  2022.  Ribosomal protein S6 kinase beta-1 gene variants cause hypertrophic cardiomyopathy.. J Med Genet. 59(10):984-992.
Jain R, Brockmann A.  2020.  Sex-specific molecular specialization and activity rhythm dependent gene expression in honey bee antennae.. J Exp Biol.
Jain I, Rao M, Tran PT.  2023.  Reliable and robust control of nucleus centering is contingent on nonequilibrium force patterns.. iScience. 26(5):106665.
Jain R, Brockmann A.  2018.  Time-restricted foraging under natural light/dark condition shifts the molecular clock in the honey bee, Apis mellifera.. Chronobiol Int. :1-12.
Jaiman A, Thattai M.  2020.  Golgi compartments enable controlled biomolecular assembly using promiscuous enzymes.. Elife. 9
Jahnavi J, Pritha D, V MAshwini, Vijay B, R PGuntupalli, Anjali G, Sandeep P, Navendu P, Ishan A, Kartik S et al..  2025.  Linking eras and data: natural history collections as the foundation of India’s biodiversity science..
Jagtap S, Shivaprasad PV.  2014.  Diversity, expression and mRNA targeting abilities of Argonaute-targeting miRNAs among selected vascular plants.. BMC Genomics. 15(1):1049.
Jagtap S, Pattabiraman C, Sankaradoss A, Krishna S, Roy R.  2023.  Evolutionary dynamics of dengue virus in India.. PLoS Pathog. 19(4):e1010862.
Jaganathan D, Rajakani R, Doddamani D, Saravanan D, Pulipati S, Vivek Hari Sundar G, Sellamuthu G, Jayabalan S, Kumari K, Parthasarathy P et al..  2023.  A conserved SNP variation in the pre-miR396c flanking region in Oryza sativa indica landraces correlates with mature miRNA abundance.. Sci Rep. 13(1):2195.
Jadhav M.P', Verma S', Thirumalai V'.  2025.  Ionic conductances driving tonic firing in Purkinje neurons of larval zebrafish.. Journal of Physiology.
Jabir MV, N Chaitanya A, Mathew M, Samanta GK.  2017.  Direct transfer of classical non-separable states into hybrid entangled two photon states.. Sci Rep. 7(1):7331.
Jabeen S, Thirumalai V.  2018.  The interplay between electrical and chemical synaptogenesis.. J Neurophysiol.
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Iyer A, Alva A, Granada AE, Chakrabarti S.  2025.  Inheritable cell-states shape drug-persister correlations and population dynamics in cancer cells.. PLoS Comput Biol. 21(9):e1013446.
Iyer MS, Joshi AG, Sowdhamini R.  2018.  Genome-wide survey of remote homologues for protein domain superfamilies of known structure reveals unequal distribution across structural classes.. Mol Omics.
Iyer KS, Prabhakara C, Mayor S, Rao M.  2023.  Cellular compartmentalisation and receptor promiscuity as a strategy for accurate and robust inference of position during morphogenesis. . Elife. :12:e79257.
Iyer MS, Bhargava K, Pavalam M, Sowdhamini R.  2019.  GenDiS database update with improved approach and features to recognize homologous sequences of protein domain superfamilies.. Database (Oxford). 2019
Iyengar SB, Sumanta B., Barua D, Mishra C, Sankaran M.  2017.  A dominant dwarf shrub increases diversity of herbaceous plant communities in a Trans-Himalayan rangeland. Plant Ecology. 218(7):843–854.
Issar S, Leroy C, d'Ettorre P, Kilner RM.  2024.  Seasonal Patterns of Resource Use Within Natural Populations of Burying Beetles.. Ecol Evol. 14(10):e70429.
Islam Z, Saravanan B, Walavalkar K, Farooq U, Singh AKumar, Sabarinathan R, Thakur J, Pandit A, Henikoff S, Notani D.  2023.  Active enhancers strengthen insulation by RNA-mediated CTCF binding at chromatin domain boundaries.. Genome Res.
Islam Z, Shigvan S, Singh A, Notani D.  2026.  The assembly and functions of multiway enhancer-promoter hubs.. Curr Opin Genet Dev. 97:102446.
Indu M, Meera B, Sivakumar K, Mahadevan C, Shafi K, Nagarathnam B, Sowdhamini R, Sakuntala M.  2022.  ‘Priming’ protects Piper nigrum L. from Phytophthora capsici through reinforcement of phenylpropanoid pathway and possible enhancement of Piperine biosynthesis . Front. Plant Sci.. 13
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Hussain N, Apotikar A, Pidathala S, Mukherjee S, Burada AP, Sikdar SK, Vinothkumar KR, Penmatsa A.  2024.  Cryo-EM structures of pannexin 1 and 3 reveal differences among pannexin isoforms.. Nat Commun. 15:2942.
Husain K, Rao M.  2017.  Emergent Structures in an Active Polar Fluid: Dynamics of Shape, Scattering, and Merger.. Phys Rev Lett. 118(7):078104.
Huelsmeier J, Walker E, Bakthavachalu B, Ramaswami M.  2021.  A C-terminal ataxin-2 disordered region promotes Huntingtin protein aggregation and neurodegeneration in Drosophila models of Huntington's disease.. G3 (Bethesda).
Hudson LN, Newbold T, Contu S, Hill SLL, Kumar A.  2017.  The database of the PREDICTS (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems) project. Ecology and Evolution. 7(1):145-188.
Huang Z-F, Chiba H, Jin J, Kizhakke AG, Wang M, Kunte K, Fan X.  2019.  A multilocus phylogenetic framework of the tribe Aeromachini (Lepidoptera: Hesperiidae: Hesperiinae), with implications for taxonomy and biogeography. Systematic Entomology.
Hsu JL, Crawford JChase, Tammone MN, Ramakrishnan U, Lacey EA, Hadly EA.  2017.  Genomic data reveal a loss of diversity in two species of tuco-tucos (genus Ctenomys) following a volcanic eruption.. Sci Rep. 7(1):16227.
Houot B, Cazalé-Debat L, Fraichard S, Everaerts C, Saxena N, Sane SP, Ferveur J-F.  2018.  Gene regulation and species-specific evolution of free-flight odor-tracking in Drosophila.. Mol Biol Evol. 35(1):3-15.
Hou Y, Cao C, Chiba H, Chang Z, Huang S, Zhu L, Kunte K, Huang Z, Wang M, Fan X.  2023.  Molecular phylogeny, historical biogeography, and classification of Pseudocoladenia butterflies (Lepidoptera: Hesperiidae).. Mol Phylogenet Evol. 186:107865.
Honda A, Kita T, Seshadri SVidhya, Misaki K, Ahmed Z, Ladbury JE, Richardson GP, Yonemura S, Ladher RK.  2018.  FGFR1-mediated protocadherin-15 loading mediates cargo specificity during intraflagellar transport in inner ear hair-cell kinocilia.. Proc Natl Acad Sci U S A. 115(33):8388-8393.
Holliday GL, Bairoch A, Bagos PG, Chatonnet A, Craik DJ, Finn RD, Henrissat B, Landsman D, Manning G, Nagano N et al..  2015.  Key challenges for the creation and maintenance of specialist protein resources.. Proteins. 83(6):1005-13.
Holla H, Sharma A, Bhat P, Shinde D, Das B.  2017.  Two new substituted polychiral 5, 6-dihydro-alpha-pyrones from Orthosiphon diffusus and molecular docking studies. PHYTOCHEMISTRY LETTERS. 22:21-26.
Hoban S, Bruford MW, W Funk C, Galbusera P, M Griffith P, Grueber CE, Heuertz M, Hunter ME, Hvilsom C, Stroil BKalamujic et al..  2021.  Global Commitments to Conserving and Monitoring Genetic Diversity Are Now Necessary and Feasible.. Bioscience. 71(9):964-976.
Hoban S, Bruford M, Jackson JD, Lopes-Fernandes M, , Ramakrishnan U, al et.  2020.  Genetic diversity targets and indicators in the CBD post-2020 Global Biodiversity Framework must be improved. BIOLOGICAL CONSERVATION. 248
Hinsen K, Vaitinadapoule A, Ostuni MA, Etchebest C, Lacapere J-J.  2015.  Construction and validation of an atomic model for bacterial TSPO from electron microscopy density, evolutionary constraints, and biochemical and biophysical data.. Biochim Biophys Acta. 1848(2):568-80.
Hindle SJ, Hebbar S, Schwudke D, Elliott CJH, Sweeney ST.  2017.  A saposin deficiency model in Drosophila: Lysosomal storage, progressive neurodegeneration and sensory physiological decline.. Neurobiol Dis. 98:77-87.
Himeoka Y, Kirkegaard JB, Mitarai N, Krishna S.  2024.  Roles of network topology in the relaxation dynamics of simple chemical reaction network models.. Sci Rep. 14(1):22187.
Hime PM, Lemmon AR, Lemmon ECMoriarty, Prendini E, Brown JM, Thomson RC, Kratovil JD, Noonan BP, R Pyron A, Peloso PLV et al..  2021.  Phylogenomics Reveals Ancient Gene Tree Discordance in the Amphibian Tree of Life.. Syst Biol. 70(1):49-66.
Hill KBR, Marshall DC, Marathe K, Moulds MS, Lee YJune, Pham T-H, Mohagan AB, Sarkar V, Price BW, Duffels J.P et al..  2021.  The molecular systematics and diversification of a taxonomically unstable group of Asian cicada tribes related to Cicadini Latreille, 1802 (Hemiptera : Cicadidae). INVERTEBRATE SYSTEMATICS.
Hilgen G, Sorbaro M, Pirmoradian S, Muthmann J-O, Kepiro IEdit, Ullo S, Ramirez CJuarez, Encinas APuente, Maccione A, Berdondini L et al..  2017.  Unsupervised Spike Sorting for Large-Scale, High-Density Multielectrode Arrays.. Cell Rep. 18(10):2521-2532.
Hembram DShiba Sank, Negi H, Biswas P, Tripathi V, Bhushan L, Shet D, Kumar V, Das R.  2020.  The Viral SUMO-Targeted Ubiquitin Ligase ICP0 is Phosphorylated and Activated by Host Kinase Chk2.. J Mol Biol. 432(7):1952-1977.
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