Author Title [ Type(Desc)] Year
Journal Article
Uddin A, Malla JA, Kumar H, Kumari M, Sinha S, Sharma VK, Kumar Y, Talukdar P, Lahiri M, Maiti TK et al..  2022.  Development of a Systematic Strategy toward Promotion of α-Synuclein Aggregation Using 2-Hydroxyisophthalamide-Based Systems. . Biochemistry.
Mondal S, K Shafi M, Raizada A, Song H, Badigannavar AM, Sowdhamini R.  2022.  Development of candidate gene-based markers and map-based cloning of a dominant rust resistance gene in cultivated groundnut (Arachis hypogaea L.).. Gene. 827:146474.
Anil S, Rawson D, Zhang T.  2018.  Development of molecular markers for zebrafish (Danio rerio) ovarian follicle growth assessment following in-vitro culture in cryopreservation studies.. Cryobiology. 83:75-83.
Srivastava T, Kumar A, Kumar V, Umapathy G.  2021.  Diet Drives Differences in Reproductive Synchrony in Two Sympatric Mountain Ungulates in the Himalaya. FRONTIERS IN ECOLOGY AND EVOLUTION. 9(647465)
Kalita U, Kumar A, Sinha A.  2018.  Diet Selection by the Capped Langur (Trachypithecus pileatus) in Hollongapar Gibbon Wildlife Sanctuary, Assam, North-East India . Folia Primatologica. 89(324):181.
Kshettry A, Vaidyanathan S., Athreya V.  2018.  Diet Selection of Leopards (Panthera pardus) in a Human-Use Landscape in North-Eastern India . Tropical Conservation Science. 11
Phalnikar K, Kunte K, Agashe D.  2018.  Dietary and developmental shifts in butterfly-associated bacterial communities.. R Soc Open Sci. 5(5):171559.
Chakravarthi A, Rajus S, Kelber A, Dacke M, Baird E.  2018.  Differences in spatial resolution and contrast sensitivity of flight control in the honeybees and .. J Exp Biol.
Rodrigues D, Renaud Y, VijayRaghavan K, Waltzer L, Inamdar MS.  2021.  Differential activation of JAK-STAT signaling reveals functional compartmentalization in blood progenitors.. Elife. 10
Dhaka B, Sabarinathan R.  2021.  Differential chromatin accessibility landscape of gain-of-function mutant p53 tumours.. BMC Cancer. 21(1):669.
Karnawat V, Gogia S, Balaram H, Puranik M.  2015.  Differential Distortion of Purine Substrates by Human and Plasmodium falciparum Hypoxanthine-Guanine Phosphoribosyltransferase to Catalyse the Formation of Mononucleotides.. Chemphyschem. 16(10):2172-81.
Dongaonkar B, Hupbach A, Nadel L, Chattarji S.  2019.  Differential effects of unipolar versus bipolar depression on episodic memory updating.. Neurobiol Learn Mem. 161:158-168.
Vaishnav MS, Kumari N, Srikanta S, Krishnaswamy PR, Balaram P, Bhat N.  2023.  Differential Spectrum of Albumin Glycation, Oxidation, and Truncation in Type 2 and Type 1 Diabetes: Clinical and Biological Implications.. Metab Syndr Relat Disord.
Singh A, Thakur NL, Sheikh F.  2022.  Differential tolerance capacity of intertidal organisms (sponge and zoanthid) to the environmental stresses: Preliminary Bndings from a rockpool transplantation experiment. JOURNAL OF EARTH SYSTEM SCIENCE. 131(1)
Bhattacharjee R, Udgaonkar JB.  2022.  Differentiating between the sequence of structural events on alternative pathways of folding of a heterodimeric protein.. Protein Sci. :e4513.
Singh A, Chakrabarti S.  2023.  Diffusion controls local versus dispersed inheritance of histones during replication and shapes epigenomic architecture.. PLoS Comput Biol. 19(12):e1011725.
Saha S, Lee I-H, Polley A, Groves JT, Rao M, Mayor S.  2015.  Diffusion of GPI-anchored proteins is influenced by the activity of dynamic cortical actin.. Mol Biol Cell. 26(22):4033-45.
Agavekar G, Agashe D, Economo EP.  2019.  Dimensions of ant diversity on a small tropical island. INSECT CONSERVATION AND DIVERSITY. 12(2):161-171.
Srinivasachari S, Tiwari VR, Kharbanda T, Sowdamini R, Subramanian R.  2023.  A dimer between monomers and hexamers-Oligomeric variations in glucosamine-6-phosphate deaminase family.. PLoS One. 18(1):e0271654.
Singh A, Vashistha N, Heck J, Tang X, Wipf P, Brodsky JL, Hampton RY.  2020.  Direct involvement of Hsp70 ATP hydrolysis in Ubr1-dependent quality control.. Mol Biol Cell. :mbcE20080541.
Jabir MV, N Chaitanya A, Mathew M, Samanta GK.  2017.  Direct transfer of classical non-separable states into hybrid entangled two photon states.. Sci Rep. 7(1):7331.
Nordenfelt P, Moore TI, Mehta SB, Kalappurakkal JMathew, Swaminathan V, Koga N, Lambert TJ, Baker D, Waters JC, Oldenbourg R et al..  2017.  Direction of actin flow dictates integrin LFA-1 orientation during leukocyte migration.. Nat Commun. 8(1):2047.
Shukla A, Bhattacharyya A, Kuppusamy L, Srivas M, Thattai M.  2017.  Discovering vesicle traffic network constraints by model checking.. PLoS One. 12(7):e0180692.
Viswanath B, Rao NP, Narayanaswamy JC, Sivakumar PT, Kandasamy A, Kesavan M, Mehta UMeherwan, Venkatasubramanian G, John JP, Mukherjee O et al..  2018.  Discovery biology of neuropsychiatric syndromes (DBNS): a center for integrating clinical medicine and basic science.. BMC Psychiatry. 18(1):106.
Mehta D, Koottathazhath A, Ramesh A.  2020.  Discovery of ANTAR-RNAs and their Mechanism of Action in Mycobacteria.. J Mol Biol.
Bandyopadhyay S, Chaudhury S, Mehta D, Ramesh A.  2020.  Discovery of iron-sensing bacterial riboswitches.. Nat Chem Biol.
Bhaumik V, Kunte K.  2020.  Dispersal and migration have contrasting effects on butterfly flight morphology and reproduction.. Biol Lett. 16(8):20200393.
Phalnikar K, Kunte K, Agashe D.  2019.  Disrupting butterfly caterpillar microbiomes does not impact their survival and development.. Proc Biol Sci. 286(1917):20192438.
Setua S, Enguita FJ, Chora ÂFerreira, Ranga-Prasad H, Lahree A, Marques S, Sundaramurthy V, Mota MM.  2020.  Disrupting Plasmodium UIS3-host LC3 interaction with a small molecule causes parasite elimination from host cells.. Commun Biol. 3(1):688.
George EAntony, Thulasi N, Kohl PL, Suresh S, Rutschmann B, Brockmann A.  2021.  Distance estimation by Asian honey bees in two visually different landscapes.. J Exp Biol.
Chandran R, Kale G, Philippe J-M, Lecuit T, Mayor S.  2021.  Distinct actin-dependent nanoscale assemblies underlie the dynamic and hierarchical organization of E-cadherin.. Curr Biol.
Sellamuthu G, Jegadeeson V, Sajeevan RSivarajan, Rajakani R, Parthasarathy P, Raju K, Shabala L, Chen Z-H, Zhou M, Sowdhamini R et al..  2020.  Distinct Evolutionary Origins of Intron Retention Splicing Events in Antiporter Transcripts Relate to Sequence Specific Distinctions in Species.. Front Plant Sci. 11:267.
Dastidar SGhosh, Sharma SDas, Chakraborty S, Chattarji S, Bhattacharya A, Muddashetty RS.  2020.  Distinct regulation of bioenergetics and translation by group I mGluR and NMDAR.. EMBO Rep. 21(6):e48037.
Nawalpuri B, Sharma A, Chattarji S, Muddashetty RS.  2021.  Distinct temporal expression of GW182 (TNRC6A) in neurons regulates dendritic arborization.. J Cell Sci.
Kalmankar NV, Hari H, Sowdhamini R, Venkatesan R.  2021.  Disulfide-Rich Cyclic Peptides from Protect against β-Amyloid Toxicity and Oxidative Stress in Transgenic .. J Med Chem.
Nandkishore N, Vyas B, Javali A, Ghosh S, Sambasivan R.  2018.  Divergent early mesoderm specification underlies distinct head and trunk muscle programmes in vertebrates.. Development. 145(18)
Khan I, Prakash A, Agashe D.  2016.   Divergent immune priming responses across flour beetle life stages and populations . ECOLOGY AND EVOLUTION . 6(21):7847-7855.
Krishnan A, Tamma K.  2016.  Divergent morphological and acoustic traits in sympatric communities of Asian barbets.. R Soc Open Sci. 3(8):160117.
Alves DA, George EA, Kaur R, Brockmann A, Hrncir M, Grüter C.  2023.  Diverse communication strategies in bees as a window into adaptations to an unpredictable world.. Proc Natl Acad Sci U S A. 120(24):e2219031120.
Pal S, Mirza ZA, Dsouza P, Shanker K.  2021.  Diversifying on the Ark: multiple new endemic lineages of dwarf geckos from the Western Ghats provide insights into the systematics and biogeography of South Asian (Reptilia: Squamata).. Zool Res. 42(6):675-691.
Mehta D, Ramesh A.  2021.  Diversity and prevalence of ANTAR RNAs across actinobacteria.. BMC Microbiol. 21(1):159.
Jagtap S, Shivaprasad PV.  2014.  Diversity, expression and mRNA targeting abilities of Argonaute-targeting miRNAs among selected vascular plants.. BMC Genomics. 15(1):1049.
Mukherjee R, Deb R, Devy SM.  2019.  Diversity matters: Effects of density compensation in pollination service during rainfall shift.. Ecol Evol. 9(17):9701-9711.
Prakash DL, Gosavi S.  2022.  The diversity of protein-protein interaction interfaces within T=3 icosahedral viral capsids. Front Mol Biosci. . 9:967877
Ambardar S, Bhagat N, Vakhlu J, Gowda M.  2021.  Diversity of Rhizo-Bacteriome of Crocus sativus Grown at Various Geographical Locations and Cataloging of Putative PGPRs. FRONTIERS IN SUSTAINABLE FOOD SYSTEMS. (644230)
Pulipati S, Somasundaram S, Rana N, Kumaresan K, Shafi M, Civan P, Sellamuthu G, Jaganathan D, Ramaravi PVenkatesan, Punitha S. et al..  2022.  Diversity of Sodium Transporter HKT1;5 in Genus Oryza. RICE SCIENCE. 29(1):31-46.
Goyal A, Maslov S.  2018.  Diversity, Stability, and Reproducibility in Stochastically Assembled Microbial Ecosystems.. Phys Rev Lett. 120(15):158102.
Sharma S, Zajac M, Krishnan Y.  2020.  A DNA Aptamer for Cyclic Adenosine Monophosphate that Shows Adaptive Recognition.. Chembiochem. 21(1-2):157-162.
Taylor MJ, Husain K, Gartner ZJ, Mayor S, Vale RD.  2017.  A DNA-Based T Cell Receptor Reveals a Role for Receptor Clustering in Ligand Discrimination.. Cell. 169(1):108-119.e20.
Malhotra S, Mathew OK, Sowdhamini R.  2015.  DOCKSCORE: a webserver for ranking protein-protein docked poses.. BMC Bioinformatics. 16:127.
Ashok A, Naaz S, Kota LNarayanan, Sen S, Purushottam M, Faruq M, Kumari R, Yadav V, Kannan R, Jain S et al..  2019.  Does retinoic acid reverse cell cycle dysregulation in Alzheimer's disease lymphocytes? Asian J Psychiatr. 39:174-177.
Unnikrishnan S, Gadagkar R.  2021.  Dominance behaviour and division of labour in the tropical primitively eusocial wasp Ropalidia cyathiformis. INSECTES SOCIAUX.
Iyengar SB, Sumanta B., Barua D, Mishra C, Sankaran M.  2017.  A dominant dwarf shrub increases diversity of herbaceous plant communities in a Trans-Himalayan rangeland. Plant Ecology. 218(7):843–854.
Soman S, Bhattacharya A, Panicker MM.  2020.  Dopamine requires unique residues to signal via the serotonin 2A receptor.. Neuroscience. 319-331:319-331.
Prasad M, Kataria P, Ningaraju S, Buddidathi R, Bankapalli K, Swetha C, Susarla G, Venkatesan R, D'Silva P, Shivaprasad PV.  2022.  Double DJ-1 domain containing Arabidopsis DJ-1D is a robust macromolecule deglycase.. New Phytol.
Parkhitko AA, Ramesh D, Wang L, Leshchiner D, Filine E, Binari R, Olsen AL, Asara JM, Cracan V, Rabinowitz JD et al..  2020.  Downregulation of the tyrosine degradation pathway extends lifespan.. Elife. 9
Chakrabarti P, Kolay S, Yadav S, Kumari K, Nair A, Trivedi D, Raghu P.  2015.  A dPIP5K dependent pool of phosphatidylinositol 4,5 bisphosphate (PIP2) is required for G-protein coupled signal transduction in Drosophila photoreceptors.. PLoS Genet. 11(1):e1004948.
Joshi AG, Praveen P, Ramakrishnan U, Sowdhamini R.  2022.  Draft genome sequence of an invasive plant .. Bioinformation. 18(9):739-741.
Joshi S, Gassah R, Ismavel VAnand.  2021.  Dragonflies and damselflies (Insecta: Odonata) of Karimganj District, Assam, India with four additions to the Indian checklist. ORIENTAL INSECTS .
Gunage RD, Dhanyasi N, Reichert H, VijayRaghavan K.  2017.  Drosophila adult muscle development and regeneration.. Semin Cell Dev Biol.
Trisal S, Aranha M, Chodankar A, VijayRaghavan K, Ramaswami M.  2022.  A DROSOPHILA CIRCUIT FOR HABITUATION OVERRIDE.. J Neurosci.
Jayakumar S, Richhariya S, O Reddy V, Texada MJ, Hasan G.  2016.  Drosophila larval to pupal switch under nutrient stress requires IP3R/Ca(2+) signalling in glutamatergic interneurons.. Elife. 5
Yadav S, Cockcroft S, Raghu P.  2016.  The Drosophila photoreceptor as a model system for studying signalling at membrane contact sites.. Biochem Soc Trans. 44(2):447-51.
Sankaran M, Staver C.  2019.  Droughts and the ecological future of tropical savanna vegetation. JOURNAL OF ECOLOGY. 107(4):1531-1549.
Oli CBahadur, Panthi S, Subedi N, Ale G, Pant G, Khanal G, Bhattarai S.  2018.  Dry season diet composition of four-horned antelope in tropical dry deciduous forests, Nepal.. PeerJ. 6:e5102.
Sen S, Goluguri RReddy, Udgaonkar JB.  2017.  A Dry Transition State More Compact Than the Native State Is Stabilized by Non-Native Interactions during the Unfolding of a Small Protein.. Biochemistry.
Krishnan L, Barua D, Sankaran M.  2019.  Dry-forest tree species with large seeds and low stem specific density show greater survival under drought. JOURNAL OF TROPICAL ECOLOGY. 35(1):26-33.
Kalmankar NV, Pavalam M, Indrakumar S, Srinivasan N, Sowdhamini R.  2022.  DSDBASE 2.0: updated version of DiSulphide dataBASE, a database on disulphide bonds in proteins.. Database (Oxford). 2022
Richhariya S, Jayakumar S, Sukumar SKumar, Hasan G.  2018.  dSTIM- and Ral/Exocyst-Mediated Synaptic Release from Pupal Dopaminergic Neurons Sustains Flight.. eNeuro. 5(3)
Park DEsther, Cheng J, Berrios C, Montero J, Cortés-Cros M, Ferretti S, Arora R, Tillgren ML, Gokhale PC, DeCaprio JA.  2019.  Dual inhibition of MDM2 and MDM4 in virus-positive Merkel cell carcinoma enhances the p53 response.. Proc Natl Acad Sci U S A. 116(3):1027-1032.
Kizhedathu A, Chhajed P, Yeramala L, Basu DSain, Mukherjee T, Vinothkumar KR, Guha A.  2021.  Duox generated reactive oxygen species activate ATR/Chk1 to induce G2 arrest in tracheoblasts.. Elife. 10
Sil P, Mateos N, Nath S, Buschow S, Manzo C, Suzuki KGN, Fujiwara T, Kusumi A, Garcia-Parajo MF, Mayor S.  2020.  Dynamic actin-mediated nano-scale clustering of CD44 regulates its meso-scale organization at the plasma membrane.. Mol Biol Cell. 31(7):561-579.
Krishna S, Yim DGr, Lakshmanan V, Tirumalai V, Koh JLy, Park JEun, Cheong JKong, Low JLeng, Lim MJs, Sze SKwan et al..  2019.  Dynamic expression of tRNA-derived small RNAs define cellular states.. EMBO Rep. 20(7):e47789.
Tomar A, Polygalov D, Chattarji S, McHugh TJ.  2015.  The dynamic impact of repeated stress on the hippocampal spatial map.. Hippocampus. 25(1):38-50.
Schulze A, Gomez-Marin A, Rajendran VG, Lott G, Musy M, Ahammad P, Deogade A, Sharpe J, Riedl J, Jarriault D et al..  2015.  Dynamical feature extraction at the sensory periphery guides chemotaxis.. Elife. 4
Dhawale N, Mandre S, Venkadesan M.  2019.  Dynamics and stability of running on rough terrains.. R Soc Open Sci. 6(3):181729.
Ali F, Seshasayee A.  2020.  Dynamics of Genetic Variation in Transcription Factors and Its Implications for the Evolution of Regulatory Networks in Bacteria. Nucleic Acids Res. 48(8):4100-4114.
Wang ET, J Taliaferro M, Lee J-A, Sudhakaran IP, Rossoll W, Gross C, Moss KR, Bassell GJ.  2016.  Dysregulation of mRNA Localization and Translation in Genetic Disease.. J Neurosci. 36(45):11418-11426.
Pal S, Dwivedi D, Pramanik T, Godbole G, Iwasato T, Jabaudon D, Bhalla US, Tole S.  2021.  An early cortical progenitor-specific mechanism regulates thalamocortical innervation.. J Neurosci.
Yousuf M, Iuliani I, Veetil RT, Seshasayee ASai Narain, Sclavi B, Lagomarsino MCosentino.  2020.  Early fate of exogenous promoters in E. coli.. Nucleic Acids Res.
Rahman MMostafizur, Callaghan CK, Kerskens CM, Chattarji S, O'Mara SM.  2016.  Early hippocampal volume loss as a marker of eventual memory deficits caused by repeated stress.. Sci Rep. 6:29127.
Khan I, Agashe D, Rolff J.  2017.  Early-life inflammation, immune response and ageing.. Proc Biol Sci. 284(1850)
Noordstra I, Hermoso MDíez, Schimmel L, Bonfim-Melo A, Currin-Ross D, Duong CNguyen, Kalappurakkal JMathew, Morris RG, Vestweber D, Mayor S et al..  2023.  An E-cadherin-actin clutch translates the mechanical force of cortical flow for cell-cell contact to inhibit epithelial cell locomotion.. Dev Cell.
Naik D, R. Rao SPrasad, Kunte K, Mustak MS.  2022.  Ecological monitoring and indicator taxa: butterfly communities in heterogeneous landscapes of the Western Ghats and Malabar coast, India. JOURNAL OF INSECT CONSERVATION.
Marthews T.R, Nelaballi S., Ratnam J., Sankaran M..  2015.  Ecosystem monitoring and forest census studies in South Asia (Meeting Report). Current Science. 180:1779–1782.
Ghosh P, Joshi A, Guita N, Offmann B, Sowdhamini R.  2019.  EcRBPome: a comprehensive database of all known E. coli RNA-binding proteins.. BMC Genomics. 20(1):403.
Krishnadas M, Kumar AN, Comita LS.  2019.  Edge effects reduce α-diversity but not β-diversity during community assembly in a human-modified tropical forest.. Ecol Appl. 29(8):e01996.
Venkatesan V, Christopher ACrystal, Rhiel M, Azhagiri MKumar K, Babu P, Walavalkar K, Saravanan B, Andrieux G, Rangaraj S, Srinivasan S et al..  2023.  Editing the core region in HPFH deletions alters fetal and adult globin expression for treatment of β-hemoglobinopathies.. Mol Ther Nucleic Acids. 32:671-688.
Rebehmed J, de Brevern AG, Sowdhamini R, Joseph APraveen.  2022.  Editorial: Advances in Molecular Docking and Structure-Based Modelling.. Front Mol Biosci. 9:839826.
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Sowdhamini R, Mizuguchi K.  2017.  Editorial-Sequences and topology.. Curr Opin Struct Biol.
Nataraj N, Hussain M, Ibrahim M, Hausmann AE, Rao S, Kaur S, Khazir J, Mir BAhmad, Olsson SB.  2022.  Effect of Altitude on Volatile Organic and Phenolic Compounds of Artemisia brevifolia Wall ex Dc. From the Western Himalayas. FRONTIERS IN ECOLOGY AND EVOLUTION. 10(864728)
Thakur S, Neogi S.  2020.  Effect of doped ZnO nanoparticles on bacterial cell morphology and biochemical composition. APPLIED NANOSCIENCE.
Mozaffer F, Cherian P, Krishna S, Wahl B, Menon GI.  2023.  Effect of hybrid immunity, school reopening, and the Omicron variant on trajectory of COVID-19 epidemic in India: A modelling study.. Lancet Reg Health Southeast Asia. :100095.
Sreekar R, Srinivasan U, Mammides C, Chen J, Goodale UManage, Kotagama SWimalaband, Sidhu S, Goodale E.  2015.  The effect of land-use on the diversity and mass-abundance relationships of understory avian insectivores in Sri Lanka and southern India.. Sci Rep. 5:11569.
Srinivasu BY, Arumugaperumal A, Mitra A, Muralidharan M, Das R, Mandal AKumar.  2021.  Effect of nanoparticle exposure in a living system: probed by quantification of Fetuin-B in plasma proteome and kidney tissue imaging using MALDI imaging mass spectrometry in a rat model. JOURNAL OF NANOPARTICLE RESEARCH. 23
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Kalmankar NV, Gehi BRajendraku, Sowdhamini R.  2022.  Effects of a plant cyclotide on conformational dynamics and destabilization of β-amyloid fibrils through molecular dynamics simulations.. Front Mol Biosci. 9:986704.

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