2023
Jain I, Tran PT.
2023. Prolongation of mitosis is associated with enhanced endogenous DNA damage in fission yeast.. MicroPubl Biol. 2023
van Zanten T, Greeshma PS, Mayor S.
2023. Quantitative fluorescence emission anisotropy microscopy for implementing homo-fluorescence resonance energy transfer measurements in living cells. Mol Biol Cell.. 34(6)
Chakraborty P., Deb B.K, Arige V., Musthafa T., Malik S., Yule D.I, Taylor C.W., Hasan G.
2023. Regulation of store-operated Ca2+ entry by IP3 receptors independent of their ability to release Ca2.. Elife. 12(e80447)
Gautam S, Mahapa A, Yeramala L, Gandhi A, Krishnan S, Vinothkumar KR, Chatterji D.
2023. Regulatory mechanisms of c-di-AMP synthase (MsDisA) protein from Mycobacterium smegmatis revealed by a structure - function analysis.. Protein Sci. :e4568.
Jain I, Rao M, Tran PT.
2023. Reliable and robust control of nucleus centering is contingent on nonequilibrium force patterns.. iScience. 26(5):106665.
Kaushik A, Udgaonkar JB.
2023. Replacement of the native cis prolines by alanine leads to simplification of the complex folding mechanism of a small globular protein.. Biophys J.
Bellur A, Das S, Jayaraman V, Behera S, Suryavanshi A, Balasubramanian S, Balaram P, Jindal G, Balaram H.
2023. Revisiting the Burden Borne by Fumarase: Enzymatic Hydration of an Olefin.. Biochemistry.
Agashe D, Sane M, Singhal S.
2023. Revisiting the Role of Genetic Variation in Adaptation. AMERICAN NATURALIST .
Da W., Rana S.K, Bawa K., Kunte K., Wang Z..
2023. Roof of the world: Home and border in the genomic era. Molecular Ecology Resources.
Puri M, Srivathsa A, Karanth KK, Patel I, N. Kumar S.
2023. Safe space in the woods: Mechanistic spatial models for predicting risks of human-bear conflicts in India. BIOTROPICA . 55(2):504-516.
Lamba S, Ganesan S, Daroch N, Paul K, Joshi SGopal, Sreenivas D, Nataraj A, Srikantaiah V, Mishra R, Ramakrishnan U et al..
2023. SARS-CoV-2 infection dynamics and genomic surveillance to detect variants in wastewater - a longitudinal study in Bengaluru, India.. Lancet Reg Health Southeast Asia. :100151.
Sane M, Diwan GD, Bhat BA, Wahl LM, Agashe D.
2023. Shifts in mutation spectra enhance access to beneficial mutations.. Proc Natl Acad Sci U S A.. 120(22):e2207355120.
Kamat A, Badrinarayanan A.
2023. SOS-independent bacterial DNA damage responses: diverse mechanisms, unifying function.. Curr Opin Microbiol. 73:102323.
Kasturacharya N, Dhall JKaur, Hasan G.
2023. A STIM dependent dopamine-neuropeptide axis maintains the larval drive to feed and grow in Drosophila.. PLoS Genet. 19(6):e1010435.
Vinothkumar KR.
2023. Structural heterogeneity of the Rieske iron-sulfur protein in a yeast complex III.. IUCrJ. 10(Pt 1):1-3.
Tiwari V, Sowdhamini R.
2023. Structural modelling and dynamics of full-length of TLR10 sheds light on possible modes of dimerization, ligand binding and mechanism of action.. Curr Res Struct Biol. 5:100097.
Krishnan H, Basak B, Nath VR, Mishra S, Raghu P.
2023. Structural organization of RDGB (retinal degeneration B), a multi-domain lipid transfer protein: a molecular modelling and simulation based approach.. J Biomol Struct Dyn. :1-15.
Bhattacharyya T, Ghosh A, Verma S, Raghu P, Sowdhamini R.
2023. Structural rationale to understand the effect of disease-associated mutations on Myotubularin.. Curr Res Struct Biol. 5:100100.
Ahmad M, Jha B, Bose S, Tiwari S, Dwivedy A, Kar D, Pal R, Mariadasse R, Parish T, Jeyakanthan J et al..
2023. Structural snapshots of Mycobacterium tuberculosis enolase reveal dual mode of 2PG binding and its implication in enzyme catalysis.. IUCrJ. 10(Pt 6):738-753.
Tiwari V, Sowdhamini R.
2023. Structure modelling of odorant receptor from and identification of potential repellent molecules.. Comput Struct Biotechnol J. 21:2204-2214.
Mayor S, Bhat A, Kusumi A.
2023. A Survey of Models of Cell Membranes: Toward a New Understanding of Membrane Organization.. Cold Spring Harb Perspect Biol. 15(10)
Ananthamurthy KG, Bhalla US.
2023. Synthetic Data Resource and Benchmarks for Time Cell Analysis and Detection Algorithms.. eNeuro.
Alam SSahajada M, Samanta A, Uddin F, Ali S, Hoque M.
2023. Tanshinone IIA targeting cell signaling pathways: a plausible paradigm for cancer therapy.. Pharmacol Rep.
Basu DNath, Bhaumik V, Kunte K.
2023. The tempo and mode of character evolution in the assembly of mimetic communities.. Proc Natl Acad Sci U S A. 120(1):e2203724120.
Shakeel M, Brockmann A.
2023. Temporal effects of sugar intake on fly local search and honey bee dance behaviour.. J Comp Physiol A Neuroethol Sens Neural Behav Physiol.
Panicker D, Stafford KM.
2023. Temporal variability of a soundscape near a mid-oceanic atoll in the northern Indian ocean. PROGRESS IN OCEANOGRAPHY . 214:103033.
Raju A, Xue BK, Leibler S.
2023. A theoretical perspective on Waddington's genetic assimilation experiments.. Proc Natl Acad Sci U S A. 120(51):e2309760120.
Gilmour KM, Daley MA, Egginton S, Kelber A, McHenry MJ, Patek SN, Sane SP, Schulte PM, Terblanche JS, Wright PA et al..
2023. Through the looking glass: attempting to predict future opportunities and challenges in experimental biology.. J Exp Biol. 226(24)
Rao R, Alcoverro T, Kongari P, Yoayela S, Arthur R, D'Souza E.
2023. Tolerance to aerial exposure influences distributional patterns in multi-species intertidal seagrass meadows.. Mar Environ Res. 191:106146.
Srivathsa A, Ramachandran V, Saravanan P, Sureshbabu A, Ganguly D, Ramakrishnan U.
2023. Topcats and underdogs: intraguild interactions among three apex carnivores across Asia's forestscapes.. Biol Rev Camb Philos Soc.
Wortel MT, Agashe D, Bailey SF, Bank C, Bisschop K, Blankers T, Cairns J, Colizzi ESandro, Cusseddu D, Desai MM et al..
2023. Towards evolutionary predictions: Current promises and challenges.. Evol Appl. 16(1):3-21.
Shakeel M, Kaushik S, Tanimura T, Brockmann A, Kain P.
2023. Tracking Sugar-Elicited Local Searching Behavior in Drosophila.. J Vis Exp. (201)
Mann R, Notani D.
2023. Transcription factor condensates and signaling driven transcription.. Nucleus. 14(1):2205758.
Chauhan PKumar, Sowdhamini R.
2023. Transcriptome data analysis of primary cardiomyopathies reveals perturbations in arachidonic acid metabolism.. Front Cardiovasc Med. 10:1110119.
Syiem BL, Driscoll DA, Vasudev D, Goswami VR.
2023. Tropical agricultural wooded land uses support high site use of forest birds. Biological Conservation. 281:109986.
Nazareth O, Srivathsa A, Ramachandran V.
2023. Trunks and treetops: integrating terrestrial and arboreal camera-trap surveys to document elusive mammal communities in India. MAMMAL RESEARCH.
Singh A, Soler JAntoni, Lauer J, Grill SW, Jahnel M, Zerial M, Thutupalli S.
2023. Two-component molecular motor driven by a GTPase cycle. NATURE PHYSICS.
Viswan NAnn, Bhalla USingh.
2023. Understanding molecular signaling cascades in neural disease using multi-resolution models.. Curr Opin Neurobiol. 83:102808.
Nandavaram A, Nandakumar A, Kashif GM, Sagar ALakshman, Shailaja G, Ramesh A, Siddavattam D.
2023. Unusual Relationship between Iron Deprivation and Organophosphate Hydrolase Expression.. Appl Environ Microbiol. :e0190322.
Sreedharan V, Bhalla US, Ramakrishnan N.
2023. Using sensitivity analyses to understand bistable system behavior.. BMC Bioinformatics. 24(1):136.
Ansil BR, George CElizabeth, Chandrasingh S, Viswanathan A, Thattai M, Raghu P, Devadiga S, Harikumar AGeetha, Harsha PKandi, Nair I et al..
2023. Validating saliva as a biological sample for cost-effective, rapid and routine screening for SARS-CoV-2. INDIAN JOURNAL OF MEDICAL MICROBIOLOGY. 45(100384)
Sane SP, Manjunath M, Mukunda CL.
2023. Vestibular feedback for flight control in hawkmoths.. Trends Neurosci.
Rao M.
2023. A view from the President of the Indian Biophysical Society.. Biophys Rev. 15(3):305-306.
2024
Bohra D, Islam Z, Nidharshan S, Mazumder A, Notani D.
2024. Acute Activation of Genes Through Transcriptional Condensates Impact Non-target Genes in a Chromatin Domain. eLife.
Vaishnav MS, Kumari N, Srikanta S, Simha V, Krishnaswamy PR, Balaram P, Bhat N.
2024. Albumin Oxidation and Albumin Glycation Discordance During Type 2 Diabetes Therapy: Biological and Clinical Implications.. Metab Syndr Relat Disord. 22(5):372-384.
Viswanath S.
2024. AlphaFold opens the doors to deorphanizing secreted proteins.. Cell Syst. 15(11):1000-1001.
Jhaveri R, Cannanbilla L, Bhat KSArpitha, Sankaran M, Krishnadas M.
2024. Anatomical traits explain drought response of seedlings from wet tropical forests.. Ecol Evol. 14(9):e70155.
Rathod SG, Singh A, Mantri VA.
2024. Ascertaining the spatiotemporal variations in seaweed assemblages associated with the endemic seaweed Ulva ovata along selected locations of the Gulf of Khambhat, India. AQUATIC ECOLOGY.
Cherian P, Kshirsagar J, Neekhra B, Deshkar G, Hayatnagarkar H, Kapoor K, Kaski C, Kathar G, Khandekar S, Mookherjee S et al..
2024. BharatSim: An agent-based modelling framework for India.. PLoS Comput Biol. 20(12):e1012682.
Collins DM, Janardan V, Barneda D, Anderson KE, Niewczas I, Taylor D, Qiu D, Jessen HJ, Lopez-Clavijo AF, Walker S et al..
2024. CDS2 expression regulates de novo phosphatidic acid synthesis.. Biochem J. 481(20):1449-1473.
Sreepadmanabh M, Ganesh M, Sanjenbam P, Kurzthaler C, Agashe D, Bhattacharjee T.
2024. Cell shape affects bacterial colony growth under physical confinement.. Nat Commun. 15(1):9561.
Raghu P, Sharma Y, Devi ABhuvanendr, Krishnan H.
2024. Challenges and opportunities for discovering the biology of rare genetic diseases of the brain.. J Biosci. 49
Zhang C, Joseph AMary, Casini L, Collier J, Badrinarayanan A, Manley S.
2024. Chromosome organization shapes replisome dynamics in Caulobacter crescentus.. Nat Commun. 15(1):3460.
Joshi A, Ratnam J, Paramjyothi H, Sankaran M.
2024. Climate and vegetation collectively drive soil respiration in montane forest-grassland landscapes of the southern Western Ghats, India. Journal of Tropical Ecology. 40
Carvalho APaula S, Owens HL, St Laurent RA, Earl C, Dexter KM, Messcher RL, Willmott KR, Aduse-Poku K, Collins SC, Homziak NT et al..
2024. Comprehensive phylogeny of Pieridae butterflies reveals strong correlation between diversification and temperature.. iScience. 27(4):109336.
Nayak S, Regati DReddy, Sowdhamini R.
2024. Computational analysis of human gut microbial prolyl oligopeptidases (POPs) reveal candidate genes as therapeutics for celiac disease.. Sci Rep. 14(1):19641.
Sharma A, Chandrashekar CR, Krishna S, Sowdhamini R.
2024. Computational Analysis of the Accumulation of Mutations in Therapeutically Important RNA Viral Proteins During Pandemics with Special Emphasis on SARS-CoV-2.. J Mol Biol. 436(19):168716.
Torta F, Hoffmann N, Burla B, Alecu I, Arita M, Bamba T, Bennett SAL, Bertrand-Michel J, Brügger B, Cala MP et al..
2024. Concordant inter-laboratory derived concentrations of ceramides in human plasma reference materials via authentic standards.. Nat Commun. 15(1):8562.
Adamala KP, Agashe D, Belkaid Y, Bittencourt DMatias de, Cai Y, Chang MW, Chen IA, Church GM, Cooper VS, Davis MM et al..
2024. Confronting risks of mirror life.. Science. 386(6728):1351-1353.
Singh A, Thutupalli S, Kumar M, Ameta S.
2024. Constrained dynamics of DNA oligonucleotides in phase-separated droplets.. Biophys J.
Hussain N, Apotikar A, Pidathala S, Mukherjee S, Burada AP, Sikdar SK, Vinothkumar KR, Penmatsa A.
2024. Cryo-EM structures of pannexin 1 and 3 reveal differences among pannexin isoforms.. Nat Commun. 15:2942.
Narah J, Streinzer M, Chakravorty J, Megu K, Spaethe J, Brockmann A, Schmitt T.
2024. Cuticular Hydrocarbon Profiles of Himalayan Bumble Bees (Hymenoptera: Bombus Latreille) are Species-Specific and Show Elevational Variation.. J Chem Ecol.
Joshi S, Sarkar V, Sawant D, Pawar U, Kunte K.
2024. Description of Protosticta khasia sp. nov. and Yunnanosticta siangi sp. nov., with new records of P. samtsensis Gurung & Phan, 2023 from Northeast India (Odonata: Zygoptera: Platystictidae).. Zootaxa. 5448(3):348-370.
Sreepadmanabh M, Arun AB, Bhattacharjee T.
2024. Design approaches for 3D cell culture and 3D bioprinting platforms.. Biophys Rev (Melville). 5(2):021304.
Sawant D, Joshi S, Pawar U, Naik P, Khan F, Nawge V, Kunte K.
2024. Devadatta adii sp. nov. (Odonata: Zygoptera: Devadattidae) from Upper Siang District, Arunachal Pradesh, India. ZOOTAXA. 5519(4):571-589.
Sawant D, Joshi S, Pawar U, Naik P, Khan F, Nawge V, Kunte K.
2024. Devadatta adii sp. nov. (Odonata: Zygoptera: Devadattidae) from Upper Siang District, Arunachal Pradesh, India.. Zootaxa. 5519(4):571-589.
Kumar S, Ghosh S, Shanavas N, Sivaramakrishnan V, Dwari M, Das S.
2024. Development of pial collaterals by extension of pre-existing artery tips.. Cell Rep. 43(10):114771.
Mishra S, Bansal M, Prasad V, Singh VPartap, Murthy S, Parmar S, Utescher T, Khangar R.
2024. Did the Deccan Volcanism impact the Indian flora during the Maastrichtian? EARTH-SCIENCE REVIEWS. 258(104950)
Rana D, Sartor CC, Chiaverini L, Cushman SA, Kaszta Z, Ramakrishnan U., Macdonald DW.
2024. Differentially biased sampling strategies reveal the non-stationarity of species distribution models for Indian small felids. ECOLOGICAL MODELLING. 493
Agrawal K, Prabhakar S, Bakthavachalu B, Chaturvedi D.
2024. Distinct developmental patterns in Anopheles stephensi organ systems.. Dev Biol. 508:107-122.
Sanjenbam P, Agashe D.
2024. Divergence and convergence in epiphytic and endophytic phyllosphere bacterial communities of rice landraces.. mSphere. :e0076524.
Khan A, Sil M, Thekaekara T, Garg KM, Sinha I, Khurana R, Sukumar R, Ramakrishnan U.
2024. Divergence and serial colonization shape genetic variation and define conservation units in Asian elephants.. Curr Biol.
Todisco V, Basu DNath, Prosser SWJ, Russell S, Mutanen M, Zilli A, Huertas B, Kunte K, Vane-Wright R.
2024. DNA barcodes from over-a-century-old type specimens shed light on the taxonomy of a group of rare butterflies (Lepidoptera: Nymphalidae: Calinaginae).. PLoS One. 19(7):e0305825.
Theeyancheri L, Chaki S, Bhattacharjee T, Chakrabarti R.
2024. Dynamic clustering of active rings. Phys. Rev. Research. 6(L012038 )
Rajput V, Das R, Pramanik R, Nannaware K, Sushma Y, Taji N, Rajput V, Rajkhowa R, Pacharne P, Shah P et al..
2024. Early Detection of KP.2 SARS-CoV-2 Variant using Wastewater-based Genomic Surveillance in Pune, Maharashtra, India.. J Travel Med.
Kaur K, Chandel M, Munikrishnappa VKT, Kumar P, Sahu BK, Ahamed M, Manjunath S, Gorantla M, Olsson S, Muthusamy E et al..
2024. Ecofriendly agriculture pest control using pheromone packed programed nanovolcanoes framed by graphene oxide. CLEAN TECHNOLOGIES AND ENVIRONMENTAL POLICY.
Kumar M, Murali A, Subramaniam AGopal, Singh R, Thutupalli S.
2024. Emergent dynamics due to chemo-hydrodynamic self-interactions in active polymers.. Nat Commun. 15(1):4903.
Simões deOliveira L, O'Leary HE, Nawaz S, Loureiro R, Davenport EC, Baxter P, , Dando O, Perkins E, Peltier J et al..
2024. Enhanced hippocampal LTP but normal NMDA receptor and AMPA receptor function in a rat model of CDKL5 deficiency disorder.. Mol Autism.. 15(1):28.
Chaturvedi N, Chatterjee P.
2024. Evolutionary Adaptation in Heterogeneous and Changing Environments.. Evolution.
Jean-François F, Pratibha S, Stéphane F, Enisa A, Fabrice N, Bernard M, Deepa A, Claude E.
2024. Experimental Evolution Induced by Maternal Post-copulatory Factors in Drosophila.. Behav Genet.
Maes S.L, Perring M.P, Cohen R., Akinnifesi F.K, Bargues-Tobella A., Bastin J.-f., Bauters M., Bernardino P.N, Brancalion P.HS, Bullock J.M et al..
2024. Explore before you restore: Incorporating complex systems thinking in ecosystem restoration. JOURNAL OF APPLIED ECOLOGY .
Premageetha GThambraRaj, Vinothkumar KR, Bose S.
2024. Exploring advances in single particle CryoEM with apoferritin: From blobs to true atomic resolution.. Int J Biochem Cell Biol. 169:106536.
Neethu K.C, Pushpadass HA, Franklin MEE, Krishnamurthy H..
2024. Exploring oil absorption and distribution in immersion-fried pantoa (Indian dairy dessert): effects of frying media. Journal of Food Science and Technology.
Yadav S, Vinothkumar KR.
2024. Factors affecting macromolecule orientations in thin films formed in cryo-EM.. Acta Crystallogr D Struct Biol. 80(Pt 7):535-550.
Chaba Z, Jain I, Tran PT.
2024. Fission yeast spindle dynamics and chromosome segregation fidelity show distinct thermosensitivity.. MicroPubl Biol. 2024
Gupta D, Sane SP, Arakeri JH.
2024. Generating controlled gust perturbations using vortex rings.. PLoS One. 19(7):e0305084.
Mishra S., Manohar V., Chandel S., Manoj T., Bhattacharya S., Hegde N., Nath V.R., Krishnan H., Wendling C., Mattia T.D. et al..
2024. A genetic screen to uncover mechanisms underlying lipid transfer protein function at membrane contact sites . Life Sci Alliance. 7(6):e202302525.
Panda S, Anandan A, K Shafi M, Naika MBN, Sowdhamini R, Vanishree G, Sarkar S, Travis AJ, Norton GJ, Price AH.
2024. Genome-wide association study reveals effect of nsSNPs on candidate genes in rice during iron deficiency.. Funct Integr Genomics. 24(6):198.
Raju A, Siggia ED.
2024. A geometrical model of cell fate specification in the mouse blastocyst.. Development. 151(8)
Marathe K, Maddison WP, Kunte K.
2024. Ghatippuspaschima, a new species and genus of plexippine jumping spider from the Western Ghats of India (Salticidae, Plexippini, Plexippina).. Zookeys. 1191:89-103.
Tanaka S, Matsushita Y, Hanaki Y, Higaki T, Kamamoto N, Matsushita K, Higashiyama T, Fujimoto K, Ueda M.
2024. HD-ZIP IV genes are essential for embryo initial cell polarization and the radial axis formation in Arabidopsis.. Curr Biol.
Dua N, Badrinarayanan A.
2024. Heteroplasmy in action: tracking mtDNA segregation dynamics.. EMBO J.
Sundaramurthy V, Haldar J.
2024. Honoring a Legacy: "Vigyan Ratna" Prof. G. Padmanaban.. ACS Infect Dis.
Chakrabarti S.
2024. Identifying memory genes in cancer drug tolerance.. Nat Rev Cancer.
Werner S, Okenve-Ramos P, Hehlert P, Zitouni S, Priya P, Mendonça S, Sporbert A, Spalthoff C, Göpfert MC, Jana SChandra et al..
2024. IFT88 maintains sensory function by localising signalling proteins along cilia.. Life Sci Alliance. 7(5)
Asokan MS, Joan RFlorina, Babji S, Dayma G, Nadukkandy P, Subrahmanyam V, Pandey A, Malagi G, Arya P, Mahajan V et al..
2024. Immunogenicity of SARS-CoV-2 vaccines BBV152 (COVAXIN®) and ChAdOx1 nCoV-19 (COVISHIELD™) in seronegative and seropositive individuals in India: a multicentre, nonrandomised observational study.. Lancet Reg Health Southeast Asia. 22:100361.
Sabarinathan R.
2024. Immunoproteasome as a biomarker for immunotherapy.. Nat Rev Cancer.