Author Title [ Type(Desc)] Year
Book
Seshasayee ASai Narain.  2025.  Bacterial Genomes Trees and Networks. Bacterial Genomes Trees and Networks. 1:254.
Book Chapter
Das S, Singh RRaj, Shivaprasad PV.  2017.  Artificial Induction and Maintenance of Epigenetic Variations in Plants. Plant Gene Silencing: Mechanisms and Applications. :59-75.
Kunte K, Kizhakke AGirish, Nawge V, Futuyma DJ.  2021.  Evolution of Mimicry Rings as a Window into Community Dynamics. ANNUAL REVIEW OF ECOLOGY EVOLUTION AND SYSTEMATICS . 52:315-341.
Badrinarayanan A, Leake MC.  2022.  Fluorescence Recovery After Photobleaching (FRAP) to Study Dynamics of the Structural Maintenance of Chromosome (SMC) Complex in Live Escherichia coli Bacteria.. Methods Mol Biol. 2476:31-41.
Singh A, Krishna S.  2019.  Immunomodulatory and Therapeutic Potential of Marine Flora Products in the Treatment of Cancer. Bioactive Natural Products for the Management of Cancer: from Bench to Bedside . :139-166.
Ghosh A, Raghu P.  2021.  Label-Free Quantification of Phosphoinositides in Drosophila by Mass Spectrometry.. Phosphoinositides. 2251:19-37.
Bhatia A, Moza S, Bhalla US.  2021.  Patterned Optogenetic Stimulation Using a DMD Projector.. Channelrhodopsin. 2191:173-188.
Thirumalai V, Jha U.  2022.  Recruitment of Motoneurons.. Vertebrate Motoneurons (Series: Advances in Neurobiology). 28:169-190.
Journal
Roychowdhury A, Rao M, Truskinovsky L.  2025.  Active drive towards elastic spinodals.
Powers 11.Jennifer S, , Ratnam J, Slade EM.  2025.  Announcement: Biotropica's New Subject Editors 2025.
Das SDas Soumit, Singh R.R, Shivaprasad PV.  2017.  Artificial induction and maintenance of epigenetic variations in plants..
R. Rao Y, Sankaran M, Jathanna D, Andheria A.  2025.  Assessing ungulate response to conservation-oriented village relocations and their associated management practices in a tiger reserve in central India.
Ramesh H, Malhotra R, Khurana S, Pandey D, Chhering T, Suryawanshi KRamesh.  2025.  Balancing act: persistence of the red fox in the dog-dominated landscapes of the Trans-Himalaya.
Kanojia A, Bhaduri A, Nayak S, Sowdhamini R, Mudgil Y.  2025.  Computational exploration of Arabidopsis thaliana N-Myc downregulated-like-1 for protein–protein interaction and phylogenetic conservation.
H K, S M, S S, V R, A G, R S, R P.  2025.  Conserved biochemical activity and function of phosphatidylinositol 5 phosphate 4 kinase regulates growth & development .
Mukardamwala MS, Trivedi PG, Mehta D, Viswanathan A.  2025.  Correlates of Tree Cavity Presence in a Tropical Deciduous Forest of the Northern Western Ghats, India.
Raina R., D K, M S, S T, S K, S A, V K, S B, S G, RK P et al..  2025.  Cryo-EM structures of Mycobacterium tuberculosis imidazole glycerol phosphate dehydratase in the apo state and in the presence of small molecules..
Rajashekar P, Krishnan A, Varma V, Ratnam J, Sankaran M, Lehmann CER.  2025.  Decadal scale fire dynamics in savannas and forests of the Nilgiri Biosphere Reserve, India.
Baniya S., Neupane MK, Thaker V.R, Goswami, Ramachandran V..  2025.  The dynamics of cave roost use by bats in the central Himalayas of Nepal: implications for conservation.
Powers JS, Brearley FQ, Ratnam J, Slade EM.  2025.  Editorial: Biotropica Announces a New Paper Category: Synthesis.
Daniel RFern, Kannan SK, Daroch N, Ganesan S, Mozaffer F, Srikantaiah V, Shashidhara LSubrahmany, Mishra R, Ishtiaq F.  2025.  Identifying bellwether sewershed sites for sustainable disease surveillance in Bengaluru, India: a longitudinal study.
R P, V R, V M, K N, S M, S J, S K, R S, RK Y, P S et al..  2025.  Long-Term Genomic Surveillance of SARS-CoV-2 in Campus Wastewater Depicts Lineage Trends and Public Health Implications during and after Omicron Waves.
NARAYANASAMY NISHANT, BINGHAM EMMA, FADERO TANNER, G. BOZDAG OZAN, RATCLIFF WILLIAMC, YUNKER PETER, THUTUPALLI SHASHI.  2025.  Metabolically driven flows enable exponential growth in macroscopic multicellular yeast.
V R, R P, K N, P S, A B, N J, LS S, S K, S D, M D.  2025.  Metagenomics based longitudinal monitoring of antibiotic resistome and microbiome in the inlets of wastewater treatment plants in an Indian megacity.
Barneda D, Janardan V, Swales J, Ciaccia M, Goodwin R, Cosulich S, Raghu P, Clark J, Stephens L, Hawkins P.  2025.  Phosphoinositide acyl chain diversity: comparative analysis across species and mouse tissues.
Srinivasan S, Pradhan DKumar, Rai S, Biswakarma A, Srinivasan U.  2025.  Poles Apart: The Structure and Composition of the Bird Community in Bamboo in the Eastern Himalaya.
kaushik R, Ladher Rk..  2025.  The primary cilium as a gatekeeper of FGFR2 function.
Narjala A, Shivaprasad PV.  2017.  Regulation of Plant microRNA Biogenesis.
Narjala A, Shivaprasad PV.  2017.  Regulation of Plant miRNA Biogenesis.
9. S K, SD K, H K, LB N, V V, R S, E G-W, BS H, RM B.  2025.  Sensing volatiles throughout the body: geographic- and tissue-specific olfactory receptor expression in the fig wasp.
Yau EYu Hin, Jones EE, Tsang TPak Nok, Xing S, Corlett RT, Roehrdanz P, Lohman DJ, Lee AKai Chi, Hai CWai Ching, Chowdhury S et al..  2025.  Spatial occurrence records and distributions of tropical Asian butterflies.
Ravichandran A, Nallusamy S, Selvamani SBabu, Sowdhamini R.  2025.  Uncovering the transcription factors and metabolic pathways unique to proso millet and foxtail millet under salt stress through a comparative transcriptome approach.
Journal Article
Srinivasan N, Mudgal R, Kumar G, Chandra NR, Sowdhamini R, Sandhya S.  2015.  161 Bridging the islands of protein families in sequence space using artificial sequences.. J Biomol Struct Dyn. 33 Suppl 1:103-4.
Shingate P, Upadhyay A, Khader S, Sowdhamini R.  2015.  172 Computational analysis and prediction of proteins that undergo domain swapping.. J Biomol Struct Dyn. 33 Suppl 1:112-3.
Prakash D, Ms A, Radhika B, Venkatesan R, Chalasani SH, Singh V.  2021.  1-Undecene from Pseudomonas aeruginosa is an olfactory signal for flight-or-fight response in Caenorhabditis elegans.. EMBO J. :e106938.
Arya CKumar, Yadav S, Fine J, Casanal A, Chopra G, Ramanathan G, Vinothkumar KR, Subramanian R.  2020.  A 2-Tyr-1-carboxylate Mononuclear Iron Center Forms the Active Site of a Paracoccus Dimethylformamidase.. Angew Chem Int Ed Engl.
Joshi RSudhir, Singh SPal, Panicker MM.  2019.  5-HT deletion protects against Clozapine-induced hyperglycemia.. J Pharmacol Sci. 139(2):133-135.
Gower DJ, Kamei RG, Giri V, Wilkinson M.  2017.  On the absence of Ichthyophis sikkimensis Taylor, 1960 (Amphibia: Gymnophiona: Ichthyophiidae) in the Western Ghats of peninsular India. Herpetological Journal. 27(2):181-187.
Swaminathan V, Kalappurakkal JMathew, Mehta SB, Nordenfelt P, Moore TI, Koga N, Baker DA, Oldenbourg R, Tani T, Mayor S et al..  2017.  Actin retrograde flow actively aligns and orients ligand-engaged integrins in focal adhesions.. Proc Natl Acad Sci U S A. 114(40):10648-10653.
Fox AW, Abel PW, Minneman KP.  1985.  Activation of alpha 1-adrenoceptors increases [3H]inositol metabolism in rat vas deferens and caudal artery.. Eur J Pharmacol. 116(1-2):145-52.
Rahman MMostafizur, Kedia S, Fernandes G, Chattarji S.  2017.  Activation of the same mGluR5 receptors in the amygdala causes divergent effects on specific versus indiscriminate fear.. Elife. 6
Lahree A, Baptista Sde Jesus S, Marques S, Perschin V, Zuzarte-Luís V, Goel M, Choudhary HHasan, Mishra S, Stigloher C, Zerial M et al..  2022.  Active APPL1 sequestration by Plasmodium favors liver-stage development.. Cell Rep. 39(9):110886.
Theeyancheri L, Chaki S, Bhattacharjee T, Chakrabarti R.  2023.  Active dynamics of linear chains and rings in porous media.. J Chem Phys. 159(1)
Saha S, Das A, Patra C, Anilkumar AA, Sil P, Mayor S, Rao M.  2022.  Active emulsions in living cell membranes driven by contractile stresses and transbilayer coupling. Proc Natl Acad Sci U S A.. 119(30):e2123056119.
Islam Z, Saravanan B, Walavalkar K, Farooq U, Singh AKumar, Sabarinathan R, Thakur J, Pandit A, Henikoff S, Notani D.  2023.  Active enhancers strengthen insulation by RNA-mediated CTCF binding at chromatin domain boundaries.. Genome Res.
Mandal R, Bhuyan PJyoti, Rao M, Dasgupta C.  2016.  Active fluidization in dense glassy systems.. Soft Matter. 12(29):6268-76.
Morris RG, Rao M.  2019.  Active morphogenesis of epithelial monolayers.. Phys Rev E. 100(2-1):022413.
Natesan R, Gowrishankar K, Kuttippurathu L, Kumar PBSunil, Rao M.  2022.  Active Remodeling of Chromatin and Implications for Folding.. J Phys Chem B.
Bansal A, Das A, Rao M.  2022.  Active segregation dynamics in the living cell. INDIAN JOURNAL OF PHYSICS.
Köster DVasco, Husain K, Iljazi E, Bhat A, Bieling P, R Mullins D, Rao M, Mayor S.  2016.  Actomyosin dynamics drive local membrane component organization in an in vitro active composite layer.. Proc Natl Acad Sci U S A. 113(12):E1645-54.
Banerjee DSankar, Munjal A, Lecuit T, Rao M.  2017.  Actomyosin pulsation and flows in an active elastomer with turnover and network remodeling.. Nat Commun. 8(1):1121.
Bohra D, Islam Z, Nidharshan S, Mazumder A, Notani D.  2024.  Acute Activation of Genes Through Transcriptional Condensates Impact Non-target Genes in a Chromatin Domain. eLife.
Barneda D, Janardan V, Niewczas I, Collins DM, Cosulich S, Clark J, Stephens LR, Hawkins PT.  2022.  Acyl chain selection couples the consumption and synthesis of phosphoinositides.. EMBO J. :e110038.
Kohl PL, Thulasi N, Rutschmann B, George EA, Steffan-Dewenter I, Brockmann A.  2020.  Adaptive evolution of honeybee dance dialects.. Proc Biol Sci. 287(1922):20200190.
Arnold ML, Kunte K.  2017.  Adaptive Genetic Exchange: A Tangled History of Admixture and Evolutionary Innovation.. Trends Ecol Evol.
Gautam S, Kunte K.  2020.  Adaptive plasticity in wing melanisation of a montane butterfly across a Himalayan elevational gradient. ECOLOGICAL ENTOMOLOGY.
Young A.M., Brockmann A, Dyer F.C..  2021.  Adaptive tuning of the exploitation-exploration trade-off in four honey bee species. Behavioral Ecology and Sociobiology. 75(20)
Sondhi S, Singh RPratap, Pawar U, Kunte K.  2025.  Additions to the moth (Lepidoptera) fauna of India from the eastern Himalaya and northeastern region: Part 2. Tropical Lepidoptera Research. 35
Datta S, Rashid Z, Naskar S, Chattarji S.  2023.  Administration of the glutamate-modulating drug, riluzole, after stress prevents its delayed effects on the amygdala in male rats.. PNAS Nexus. 2(6):pgad166.
Sarkar D, Shariq M, Dwivedi D, Krishnan N, Naumann R, Bhalla USingh, Ghosh HS.  2021.  Adult brain neurons require continual expression of the schizophrenia-risk gene Tcf4 for structural and functional integrity.. Transl Psychiatry. 11(1):494.
Chaturvedi D, Prabhakar S, Aggarwal A, Atreya KB, VijayRaghavan K.  2019.  Adult Drosophila muscle morphometry through microCT reveals dynamics during ageing.. Open Biol. 9(6):190087.
Shariq M, Sahasrabuddhe V, Krishna S, Radha S, Bellampalli R, Dwivedi A, Cheramangalam R, Reizis B, Hébert J, Ghosh HS.  2021.  Adult neural stem cells have latent inflammatory potential that is kept suppressed by to facilitate adult neurogenesis.. Sci Adv. 7(21)
Ghosh HS.  2019.  Adult Neurogenesis and the Promise of Adult Neural Stem Cells.. J Exp Neurosci. 13:1179069519856876.
Subhash N, Sundaramurthy V.  2021.  Advances in host-based screening for compounds with intracellular anti-mycobacterial activity.. Cell Microbiol. :e13337.
Someshwar A, Holla B, Agarwal PPansari, Thomas A, Jose A, Joseph B, Raju B, Karle H, Muthukumaran M, Kodancha PG et al..  2020.  Adverse childhood experiences in families with multiple members diagnosed to have psychiatric illnesses.. Aust N Z J Psychiatry. :4867420931157.
Sturm S, Ramesh D, Brockmann A, Neupert S, Predel R.  2016.  Agatoxin-like peptides in the neuroendocrine system of the honey bee and other insects.. J Proteomics. 132:77-84.
Nasrallah C, Cannone G, Briot J, Rottier K, Berizzi AE, Huang C-Y, Quast RB, Hoh F, Banères J-L, Malhaire F et al..  2021.  Agonists and allosteric modulators promote signaling from different metabotropic glutamate receptor 5 conformations.. Cell Rep. 36(9):109648.
Khurana TRoy, Sane SP.  2016.  Airflow and optic flow mediate antennal positioning in flying honeybees.. Elife. 5
Vaishnav MS, Kumari N, Srikanta S, Simha V, Krishnaswamy PR, Balaram P, Bhat N.  2024.  Albumin Oxidation and Albumin Glycation Discordance During Type 2 Diabetes Therapy: Biological and Clinical Implications.. Metab Syndr Relat Disord. 22(5):372-384.
Singh A, Thakur NL.  2021.  Allelopathic interaction among rocky intertidal invertebrates: sponge Cinachyrella cf. cavernosa and Zooxanthellate zoanthids Zoanthus sansibaricus. Hydrobiologia.
Viswanath S.  2024.  AlphaFold opens the doors to deorphanizing secreted proteins.. Cell Syst. 15(11):1000-1001.
Prakash A, Agashe D, Khan I.  2023.  Alteration of diet microbiota limits the experimentally evolved immune priming response in flour beetles, but not pathogen resistance.. J Evol Biol.
Prabantu VManjveekar, Tandon H, Sandhya S, Sowdhamini R, Srinivasan N.  2025.  The alteration of structural network upon transient association between proteins studied using graph theory.. Proteins. 93(1):217-225.
Booker SA, Domanski APF, Dando OR, Jackson AD, Isaac JTR, Hardingham GE, Wyllie DJA, Kind PC.  2019.  Altered dendritic spine function and integration in a mouse model of fragile X syndrome.. Nat Commun. 10(1):4813.
Karkarey R, Zambre A, Isvaran K, Arthur R.  2017.  Alternative reproductive tactics and inverse size-assortment in a high-density fish spawning aggregation.. BMC Ecol. 17(1):10.
Chatterjee KSankar, Hembram DShiba Sank, Das R.  2020.  Amide temperature coefficients in characterizing the allosteric effects of ligand binding on local stability in proteins.. Biochem Biophys Res Commun.
Nandwani N, Surana P, Udgaonkar JB, Das R, Gosavi S.  2017.  Amino-acid composition after loop deletion drives domain swapping.. Protein Sci. 26(10)
Parveen S, Singh SPal, Panicker MM, Gupta PKumar.  2019.  Amniotic membrane as novel scaffold for human iPSC-derived cardiomyogenesis.. In Vitro Cell Dev Biol Anim.
Rheinbay E, Nielsen MMuhlig, Abascal F, Wala JA, Shapira O, Tiao G, Hornshøj H, Hess JM, Juul RIstrup, Lin Z et al..  2020.  Analyses of non-coding somatic drivers in 2,658 cancer whole genomes.. Nature. 578(7793):102-111.
Hao N, Agnew D, Krishna S, Dodd IB, Shearwin KE.  2021.  Analysis of Infection Time Courses Shows CII Levels Determine the Frequency of Lysogeny in Phage 186.. Pharmaceuticals (Basel). 14(10)
Panda A, Thakur R, Kumari A, Raghu P.  2022.  Analysis of Lipid Signaling in Drosophila Photoreceptors using Mass Spectrometry.. J Vis Exp. (181)
Raghavender USurya.  2017.  Analysis of Residue Conformations in Peptides in CSD and Protein-peptide Structural Complexes.. Chem Biol Drug Des.
Jhaveri R, Cannanbilla L, Bhat KSArpitha, Sankaran M, Krishnadas M.  2024.  Anatomical traits explain drought response of seedlings from wet tropical forests.. Ecol Evol. 14(9):e70155.
Purkanti R, Thattai M.  2015.  Ancient dynamin segments capture early stages of host-mitochondrial integration.. Proc Natl Acad Sci U S A. 112(9):2800-5.
Notani D.  2025.  Androgen receptor activation for breast cancer therapy.. Nat Rev Cancer.
Rajarajan S, Snijesh VP, Anupama CE, Nair MG, Mavatkar AD, Naidu CM, Patil S, Nimbalkar VP, Alexander A, Pillai M et al..  2023.  An androgen receptor regulated gene score is associated with epithelial to mesenchymal transition features in triple negative breast cancers.. Transl Oncol. 37:101761.
Agarwal I, Thackeray T, Khandekar A.  2021.  Anew medium-sized rupicolous Cnemaspis Strauch, 1887 (Squamata: Gekkonidae) of the C. bangara clade from granite boulder habitats in Krishnagiri, Tamil Nadu, India. ZOOTAXA. 4969(4969):351-366.
Budnar S, Husain KB, Gomez GA, Naghibosadat M, Varma A, Verma S, Hamilton NA, Morris RG, Yap AS.  2019.  Anillin Promotes Cell Contractility by Cyclic Resetting of RhoA Residence Kinetics.. Dev Cell. 49(6):894-906.e12.
Purkayastha J, Das M, Bohra SChandra, Bauer AM, Agarwal I.  2020.  Another new Cyrtodactylus (Squamata: Gekkonidae) from Guwahati, Assam, India. ZOOTAXA. 4732(3):375-392.
Sane M, Miranda JJohn, Agashe D.  2018.  Antagonistic pleiotropy for carbon use is rare in new mutations.. Evolution.
Singh A, Hulsmeier J, Kandi AReddy, Pothapragada SShruti, Hillebrand J, Petrauskas A, Agrawal K, Rt K, Thiagarajan D, Jayaprakashappa D et al..  2021.  Antagonistic roles for Ataxin-2 structured and disordered domains in RNP condensation.. Elife. 10
Jha RRaj, Isvaran K.  2022.  Antelope space-use and behavior indicate multilevel responses to varying anthropogenic influences in a highly human-dominated landscape.. Ecol Evol. 12(10):e9372.
Juma M, Sankaradoss A, Ndombi R, Mwaura P, Damoda T, Nazir J, Pandit A, Khurana R, Masika M, Chirchir R et al..  2021.  Antimicrobial Resistance Profiling and Phylogenetic Analysis of Neisseria gonorrhoeae Clinical Isolates From Kenya in a Resource-Limited Setting. Front. Microbiol.
Chandrasegaran K, Sriramamurthy R, Singh A, Ravichandran P, Quader S.  2020.  Antipredatory Responses of Mosquito Pupae to Non-Lethal Predation Threat-Behavioral Plasticity Across Life-History Stages.. Environ Entomol.
Bhatia S, Narayanan N, Nagpal S, Nair DT.  2021.  Antiviral therapeutics directed against RNA dependent RNA polymerases from positive-sense viruses.. Mol Aspects Med. :101005.
Wigley BJ, Coetsee C, Kruger LM, Ratnam J, Sankaran M.  2019.  Ants, fire, and bark traits affect how African savanna trees recover following damage. BIOTROPICA.
Mukhopadhyay A, Quader S.  2018.  Ants on Clerodendrum infortunatum: Disentangling Effects of Larceny and Herbivory.. Environ Entomol. 47(5):1143-1151.
Devarajan K.  2016.  The Antsy Social Network: Determinants of Nest Structure and Arrangement in Asian Weaver Ants.. PLoS One. 11(6):e0156681.
Choudhury SDey, Dwivedi MKumar, Pippadpally S, Patnaik A, Mishra S, Padinjat R, Kumar V.  2022.  AP2 regulates Thickveins trafficking to attenuate NMJ growth signaling in .. eNeuro.
Bhagavan H, Brockmann A.  2019.  Apis florea workers show a prolonged period of nursing behavior. Apidologie.

Pages