Author Title [ Type(Desc)] Year
Journal Article
Neelamraju S, Wales DJ, Gosavi S.  2019.  Go-Kit: A Tool To Enable Energy Landscape Exploration of Proteins.. J Chem Inf Model.
Jaiman A, Thattai M.  2020.  Golgi compartments enable controlled biomolecular assembly using promiscuous enzymes.. Elife. 9
Saha S, Anilkumar AAmbika, Mayor S.  2016.  GPI-anchored protein organization and dynamics at the cell surface.. J Lipid Res. 57(2):159-75.
Narayan A, Campos LA, Bhatia S, Fushman D, Naganathan AN.  2017.  Graded Structural Polymorphism in a Bacterial Thermosensor Protein.. J Am Chem Soc. 139(2):792-802.
Agarwal I, Thackeray T, Pal S, Khandekar A.  2020.  Granite boulders act as deep-time climate refugia: A Miocene divergent clade of rupicolous Cnemaspis Strauch, 1887 (Squamata: Gekkonidae) from the Mysore Plateau, India, with descriptions of three new species. JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH.
Pothukuchi P, Agliarulo I, Pirozzi M, Rizzo R, Russo D, Turacchio G, Nuechel J, Yang J-S, Gehin C, Capolupo L et al..  2021.  GRASP55 regulates intra-Golgi localization of glycosylation enzymes to control glycosphingolipid biosynthesis. EMBO JOURNAL. :e107766.
Wigley BJ, Augustine DJ, Coetsee C, Ratnam J, Sankaran M.  2020.  Grasses continue to trump trees at soil carbon sequestration following herbivore exclusion in a semi-arid African savanna.. Ecology. :e03008.
Rastogi S., Chanchani P., Sankaran M., Warrier R..  2021.  Grasslands half-full: investigating drivers of spatial heterogeneity in ungulate occurrence in Indian Terai. JOURNAL OF ZOOLOGY .
Kohli M, Mijiddorj TNadia, Suryawanshi KRamesh, Mishra C, Boldgiv B, Sankaran M.  2020.  Grazing and climate change have site-dependent interactive effects on vegetation in Asian montane rangelands. JOURNAL OF APPLIED ECOLOGY.
Varudkar A, Ramakrishnan U.  2018.  Gut microflora may facilitate adaptation to anthropic habitat: A comparative study in .. Ecol Evol. 8(13):6463-6472.
Attiwilli S, Karmakar T, Isvaran K, Kunte K.  2021.  Habitat preference and functional traits influence responses of tropical butterflies to varied habitat disturbance. INTERNATIONAL JOURNAL OF TROPICAL INSECT SCIENCE.
Hariharan P, Bangal P, Sridhar H, Shanker K.  2022.  Habitat use by mixed-species bird flocks in tropical forests of the Western Ghats, India. JOURNAL OF TROPICAL ECOLOGY .
Young AM, Kodabalagi S, Brockmann A, Dyer FC.  2021.  A hard day's night: Patterns in the diurnal and nocturnal foraging behavior of Apis dorsata across lunar cycles and seasons.. PLoS One. 16(10):e0258604.
Dinesh AS, Mathur V, Ansil BR, Chandru V, Chellam R, Vanak ATamim, Ramakrishnan U, Rajagopal P.  2020.  Health Heatmap of India: An Open Data Platform.. J Indian Inst Sci. :1-16.
Wordley CFR, Sankaran M, Mudappa D, Altringham JD.  2018.  Heard but not seen: Comparing bat assemblages and study methods in a mosaic landscape in the Western Ghats of India.. Ecol Evol. 8(8):3883-3894.
Sen S, VijayRaghavan K.  2019.  Heinrich Reichert (1949-2019).. Development. 146(16)
Mohapatra PP, Agarwal I, Mohalik RKumar, Dutta SK, Khandekar A.  2023.  Hemidactylus paucifasciatus (Squamata: Gekkonidae), a new species of large-bodied, tuberculate gecko from Northern Odisha, India. ZOOTAXA . 5301(3):365-382.
Bhatia S, Udgaonkar JB.  2022.  Heterogeneity in Protein Folding and Unfolding Reactions.. Chem Rev.
Sachdeva K, Goel M, Sundaramurthy V.  2020.  Heterogeneity in the endocytic capacity of individual macrophage in a population determines its subsequent phagocytosis, infectivity and subcellular trafficking.. Traffic. 21(8):522-533.
Amarasinghe AAT, Karunarathna S, Campbell PD, Gayan AKA, Ranasinghe WDB, De Silva A, Mirza ZA.  2022.  The hidden diversity and inland radiation of Sri Lanka's ground-dwelling geckos of the genus Cyrtodactylus (Reptilia: Gekkonidae). SYSTEMATICS AND BIODIVERSITY . 20(1):1-25.
Dorazio RM, K Karanth U.  2017.  A hierarchical model for estimating the spatial distribution and abundance of animals detected by continuous-time recorders.. PLoS One. 12(5):e0176966.
Shettigar N, Joshi A, Dalmeida R, Gopalkrishna R, Chakravarthy A, Patnaik S, Mathew M, Palakodeti D, Gulyani A.  2017.  Hierarchies in light sensing and dynamic interactions between ocular and extraocular sensory networks in a flatworm.. Sci Adv. 3(7):e1603025.
Jha U, Kondrychyn I, Korzh V, Thirumalai V.  2021.  High behavioral variability mediated by altered neuronal excitability in mutant zebrafish.. eNeuro.
Nair AG, Castro LRV, Khoury MEl, Gorgievski V, Giros B, Tzavara ET, Hellgren-Kotaleski J, Vincent P.  2019.  The high efficacy of muscarinic M4 receptor in D1 medium spiny neurons reverses striatal hyperdopaminergia.. Neuropharmacology. 146:74-83.
Sagar V, Kaelin CB, Natesh M, P Reddy A, Mohapatra RK, Chhattani H, Thatte P, Vaidyanathan S, Biswas S, Bhatt S et al..  2021.  High frequency of an otherwise rare phenotype in a small and isolated tiger population.. Proc Natl Acad Sci U S A. 118(39)
Ansil BR, Mendenhall IH, Ramakrishnan U.  2021.  High prevalence and diversity of Bartonella in small mammals from the biodiverse Western Ghats.. PLoS Negl Trop Dis. 15(3):e0009178.
Tamma K, Ramakrishnan U.  2015.  Higher speciation and lower extinction rates influence mammal diversity gradients in Asia.. BMC Evol Biol. 15:11.
Naik T, Sharda M, P LC, Virbhadra K, Pandit A.  2023.  High-quality single amplicon sequencing method for illumina MiSeq platform using pool of 'N' (0-10) spacer-linked target specific primers without PhiX spike-in.. BMC Genomics. 24(1):141.
Agarwal I, Khandekar A, Giri VB, Ramakrishnan U, Karanth P.  2019.  The hills are alive with geckos! A radiation of a dozen species on sky islands across peninsular India (Squamata: Gekkonidae, Hemiphyllodactylus) with the description of three new species. Organisms Diversity & Evolution. 19(2):341–361.
Bhalla US.  2021.  HillTau: A fast, compact abstraction for model reduction in biochemical signaling networks.. PLoS Comput Biol. 17(11):e1009621.
Madan JS, Gupta K, Chattarji S, Bhattacharya A.  2018.  Hippocampal and amygdalar cell-specific translation is similar soon after stress but diverge over time.. Hippocampus.
Varghese PC, Rajam SM, Nandy D, Jory A, Mukherjee A, Dutta D.  2021.  Histone chaperone APLF level dictate implantation of mouse embryo. J Cell Sci. 134(1)
Saha S, Raghupathy R, Mayor S.  2015.  Homo-FRET imaging highlights the nanoscale organization of cell surface molecules.. Methods Mol Biol. 1251:151-73.
Somasundaram S, Véry A-A, Vinekar RS, Ishikawa T, Kumari K, Pulipati S, Kumaresan K, Corratgé-Faillie C, Sowdhamini R, Parida A et al..  2020.  Homology modeling identifies crucial amino-acid residues that confer higher Na+ transport capacity of OcHKT1;5 from Oryza coarctata Roxb.. Plant Cell Physiol.
Singh AS, Shah A, Brockmann A.  2018.  Honey bee foraging induces upregulation of early growth response protein 1, hormone receptor 38 and candidate downstream genes of the ecdysteroid signalling pathway.. Insect Mol Biol. 27(1):90-98.
Chatterjee A, George EA, V PM, Basu P, Brockmann A.  2019.  Honey bees flexibly use two navigational memories when updating dance distance information.. J Exp Biol. 222(Pt 11)
Deb R, Nair A, Agashe D.  2019.  Host dietary specialization and neutral assembly shape gut bacterial communities of wild dragonflies.. PeerJ. 7:e8058.
Nair A, Agashe D.  2016.  Host-specific, spatial and temporal variation in culturable gut bacterial communities of dragonflies. Current Science. 110(8):1513-1523.
Thattai M.  2019.  How contraction has shaped evolution.. Elife. 8
Malhotra P, Udgaonkar JB.  2016.  How cooperative are protein folding and unfolding transitions? Protein Sci.
Chandrasegaran K, Juliano SA.  2019.  How Do Trait-Mediated Non-lethal Effects of Predation Affect Population-Level Performance of Mosquitoes? Front Ecol Evol. 7
Brockmann A.  2023.  How India Changed My Ideas About Honey Bees. JOURNAL OF THE INDIAN INSTITUTE OF SCIENCE .
Aylward M, Sagar V, Natesh M, Ramakrishnan U.  2022.  How methodological changes have influenced our understanding of population structure in threatened species: insights from tiger populations across India.. Philos Trans R Soc Lond B Biol Sci. 377(1852):20200418.
Willemen L, Barger NN, Brink Bten, Cantele M, Erasmus BFN, Fisher JL, Gardner T, Holland TG, Kohler F, Kotiaho JS et al..  2020.  How to halt the global decline of lands. NATURE SUSTAINABILITY.
Mukherjee S, Murata A, Ishida R, Sugai A, Dohno C, Hamada M, Krishna S, Nakatani K.  2022.  HT-SELEX-based identification of binding pre-miRNA hairpin-motif for small molecules.. Mol Ther Nucleic Acids. 27:165-174.
Thatte P, Chandramouli A, Tyagi A, Patel K, Baro B, Chhattani H, Ramakrishnan U.  2019.  Human footprint differentially impacts genetic connectivity of four wide‐ranging mammals in a fragmented landscape. Diversity and Distribution.
Thatte P, Chandramouli A, Tyagi A, Patel K, Baro P, Chhattani H, Ramakrishnan U.  2020.  Human footprint differentially impacts genetic connectivity of four wide-ranging mammals in a fragmented landscape. DIVERSITY AND DISTRIBUTIONS. 26(3):299-314.
Akhtar BM, Bhatia P, Acharya S, Sharma S, Sharma Y, Aswathy BS, Ganapathy K, Vasudevan A, Raghu P.  2022.  A human stem cell resource to decipher the biochemical and cellular basis of neurodevelopmental defects in Lowe Syndrome.. Biol Open.
Kamdar A, Baishya HKumar, Nagendra H, Ratnam J, Smith D, Sekar N.  2022.  Human–elephant conflict mitigation as a public good: what determines fence maintenance? Ecology and Society. 27(3)
Ramachandran R, Kumar A, Sundar KSGopi, Bhalla RSingh.  2017.  Hunting or habitat? Drivers of waterbird abundance and community structure in agricultural wetlands of southern India. Ambio.
Sarkar SS, Trivedi DV, Morck MM, Adhikari AS, Pasha SN, Ruppel KM, Spudich JA.  2020.  The hypertrophic cardiomyopathy mutations R403Q and R663H increase the number of myosin heads available to interact with actin.. Sci Adv. 6(14):eaax0069.
Chaturvedi D, Reichert H, Gunage RD, VijayRaghavan K.  2017.  Identification and functional characterization of muscle satellite cells in Drosophila.. Elife. 6
Nadella RK, Chellappa A, Subramaniam AG, More RPrabhakar, Shetty S, Prakash S, Ratna N, Vandana VP, Purushottam M, Saini J et al..  2019.  Identification and functional characterization of two novel mutations in KCNJ10 and PI4KB in SeSAME syndrome without electrolyte imbalance.. Hum Genomics. 13(1):53.
Moulick R, Udgaonkar JB.  2017.  Identification and structural characterization of the precursor conformation of the prion protein which directly initiates misfolding and oligomerization.. J Mol Biol.
Bohra AAsgar, Kallman BR, Reichert H, VijayRaghavan K.  2018.  Identification of a Single Pair of Interneurons for Bitter Taste Processing in the Drosophila Brain.. Curr Biol.
Karpe SD, Jain R, Brockmann A, Sowdhamini R.  2016.  Identification of Complete Repertoire of Apis florea Odorant Receptors Reveals Complex Orthologous Relationships with Apis mellifera.. Genome Biol Evol. 8(9):2879-2895.
Cha DH, Olsson SB, Yee WL, Goughnour RB, Hood GR, Mattsson M, Schwarz D, Feder JL, Linn CE.  2017.  Identification of Host Fruit Volatiles from Snowberry (Symphoricarpos albus), Attractive to Rhagoletis zephyria Flies from the Western United States.. J Chem Ecol.
Tiwari V, Viswanath S.  2022.  Identification of potential modulators of IFITM3 by in-silico modeling and virtual screening.. Sci Rep. 12(1):15952.
Ashwini N, Sajeevan RSivarajan, Udayakumar M, Nataraja KN.  2018.  Identification of splice variant of in ssp. genotypes under salinity stress.. 3 Biotech. 8(8):345.
Nair D, Krishna JGopala, Panikkar MVelayudhan, Nair BGopalakris, Pai JGopalakris, Nair SSadasivan.  2018.  Identification, purification, biochemical and mass spectrometric characterization of novel phycobiliproteins from a marine red alga, Centroceras clavulatum.. Int J Biol Macromol.
Joshi RS, Panicker MM.  2018.  Identifying the Cellular Correlates of Antipsychotic Drugs.. eNeuro. 5(5)
Nazari V, Kunte K, Balint Z.  2023.  On the identity of Hesperia parrhasius Fabricius, 1793 and its allied species (Lepidoptera: Lycaenidae). JOURNAL OF ASIA-PACIFIC ENTOMOLOGY . 26(4):102165.
Werner S, Okenve-Ramos P, Hehlert P, Zitouni S, Priya P, Mendonça S, Sporbert A, Spalthoff C, Göpfert MC, Jana SChandra et al..  2024.  IFT88 maintains sensory function by localising signalling proteins along cilia.. Life Sci Alliance. 7(5)
Francis B, Mathew M, Arigovindan M.  2019.  Image reconstruction from undersampled confocal microscopy data using multiresolution based maximum entropy regularization. Journal of Instrumentation. 14
Anstey NJ, Kapgal V., Tiwari S., Watson TC, Toft AKH, Dando OR, Inkpen FH, Baxter PS, Kozić Z, Jackson AD et al..  2022.  Imbalance of flight-freeze responses and their cellular correlates in the Nlgn3 -/y rat model of autism. Mol Autism.. 13(1):34.
Singh ASurindro, Takhellambam MChanu, Cappelletti P, Feligioni M.  2020.  Immediate early gene kakusei potentially plays a role in the daily foraging of honey bees.. PLoS One. 15(5):e0222256.
Sommerlandt FMJ, Brockmann A, Rössler W, Spaethe J.  2019.  Immediate early genes in social insects: a tool to identify brain regions involved in complex behaviors and molecular processes underlying neuroplasticity.. Cell Mol Life Sci. 76(4):637-651.
Sankaradoss A, Jagtap S, Nazir J, Moula S-E, Modak A, Fialho J, Iyer M, Shastri JS, Dias M, Gadepalli R et al..  2022.  Immune profile and responses of a novel Dengue DNA vaccine encoding EDIII-NS1 consensus design based on Indo-African sequences.. Mol Ther.
Asokan MS, Joan RFlorina, Babji S, Dayma G, Nadukkandy P, Subrahmanyam V, Pandey A, Malagi G, Arya P, Mahajan V et al..  2024.  Immunogenicity of SARS-CoV-2 vaccines BBV152 (COVAXIN®) and ChAdOx1 nCoV-19 (COVISHIELD™) in seronegative and seropositive individuals in India: a multicentre, nonrandomised observational study.. Lancet Reg Health Southeast Asia. 22:100361.
Khan I, Prakash A, Agashe D.  2016.  Immunosenescence and the ability to survive bacterial infection in the red flour beetle Tribolium castaneum.. J Anim Ecol. 85(1):291-301.
Saha S, Krishnan H, Raghu P.  2024.  IMPA1 dependent regulation of phosphatidylinositol 4,5-bisphosphate and calcium signalling by lithium.. Life Sci Alliance. 7(2):e202302425.
Samhita L, Raval PK, Stephenson G, Thutupalli S, Agashe D.  2021.  The Impact of Mistranslation on Phenotypic Variability and Fitness.. Evolution.
Sanjenbam P, Shivaprasad P.V, Agashe D.  2022.  Impact of Phyllosphere Methylobacterium on Host Rice Landraces. MICROBIOLOGY SPECTRUM.
Salian SRaj, Pandya RKirit, Laxminarayana SLakshmi Ko, Krishnamurthy H, Cheredath A, Tholeti P, Uppangala S, Kalthur G, Majumdar S, Schlatt S et al..  2020.  Impact of Temperature and Time Interval Prior to Immature Testicular-Tissue Organotypic Culture on Cellular Niche.. Reprod Sci.
Suryawanshi KR, Redpath SM, Bhatnagar YVeer, Ramakrishnan U, Chaturvedi V, Smout SC, Mishra C.  2017.  Impact of wild prey availability on livestock predation by snow leopards.. R Soc Open Sci. 4(6):170026.
Dwivedi D, Chattarji S, Bhalla US.  2019.  Impaired reliability and precision of spiking in adults but not juveniles in a mouse model of Fragile X Syndrome.. eNeuro.
Blanco-Redondo B, Nuwal N, Kneitz S, Nuwal T, Halder P, Liu Y, Ehmann N, Scholz N, Mayer A, Kleber J et al..  2019.  Implications of the null mutation for synapsin phosphorylation, longevity, climbing, and behavioural plasticity in adult .. J Exp Biol.
Das A, Thaker M, Coetsee C, Slotow R, Vanak AT.  2021.  The importance of history in understanding large tree mortality in African savannas. ECOGRAPHY .
Sahay S, Adhikari S, Hormoz S, Chakrabarti S.  2023.  An improved rhythmicity analysis method using Gaussian Processes detects cell-density dependent circadian oscillations in stem cells.. Bioinformatics.
Syiem BLa Nam, Goswami VR, Vasudev D.  2018.  "In a tree by the brook, there's a songbird who sings": Woodlands in an agricultural matrix maintain functionality of a wintering bird community.. PLoS One. 13(8):e0201657.
Singh N, Prakash A, Chakravarthy SRanganath, Kaushik R, Ladher RK.  2022.  In Ovo and Ex Ovo Methods to Study Avian Inner Ear Development.. J Vis Exp. (184)
Mahita J, Harini K, Pichika MRao, Sowdhamini R.  2016.  An in silico approach towards the identification of novel inhibitors of the TLR-4 signaling pathway.. J Biomol Struct Dyn. 34(6):1345-62.
Sinha V, Goyal A, Svenningsen SL, Semsey S, Krishna S.  2017.  In silico Evolution of Lysis-Lysogeny Strategies Reproduces Observed Lysogeny Propensities in Temperate Bacteriophages.. Front Microbiol. 8:1386.
Nordström K, Dahlbom J, Pragadheesh VS, Ghosh S, Olsson A, Dyakova O, Suresh SKrishna, Olsson SB.  2017.  In situ modeling of multimodal floral cues attracting wild pollinators across environments.. Proc Natl Acad Sci U S A.
Nayim P, Sudhir K, Mbaveng AT, Kuete V, Sanjukta M.  2021.  In Vitro Anticancer Activity of Root's Extract toward Human Cervical Cancer and Identification of Potential Bioactive Compounds.. Biomed Res Int. 2021:4259777.
Sharma Y, Saha S, Joseph A, Krishnan H, Raghu P.  2020.  In vitro human stem cell derived cultures to monitor calcium signaling in neuronal development and function. Wellcome Open Res. 5:16.
Maihoff F, Bohlke K, Brockmann A, Schmitt T.  2022.  Increased complexity of worker CHC profiles in Apis dorsata correlates with nesting ecology.. PLoS One. 17(7):e0271745.
P HAhmed, V V, More RPrabhakar, Viswanath B, Jain S, Rao MS, Mukherjee O.  2019.  INDEX-db: The Indian Exome Reference Database (Phase I).. J Comput Biol.
Tripathi AMani, Singh R, Verma AKumar, Singh A, Mishra P, Dwivedi V, Narayan S, G Sundar VHari, Shirke PArvind, Shivaprasad PV et al..  2023.  Indian Himalayan natural Arabidopsis thaliana accessions with abolished miR158 levels exhibit robust miR173-initiated trans-acting cascade silencing.. Plant J.
Panicker D, Haris A, Sutaria D.  2018.  Indian Ocean humpback dolphin (Sousa plumbea) estuary-use patterns in Kochi harbor, India. MARINE MAMMAL SCIENCE. 34(1):208-219.
Amanullah A, Mishra R, Upadhyay A, Reddy PP, Das R, Mishra A.  2018.  Indomethacin elicits proteasomal dysfunctions develops apoptosis through mitochondrial abnormalities.. J Cell Physiol. 233(2):1685-1699.
Dwivedi V, Kumar SRajeev, Shilpashree HB, Krishna R, Rao S, Shasany AK, Olsson SB, Nagegowda DA.  2022.  An inducible potato (E,E)-farnesol synthase confers tolerance against bacterial pathogens in potato and tobacco.. Plant J.
Periasamy VSubbarayan, Riyasdeen A, Rajendiran V, Palaniandavar M, Krishnamurthy H, Alshatwi AAbdullah, Akbarsha MAbdulkader.  2020.  Induction of Redox-Mediated Cell Death in ER-Positive and ER-Negative Breast Cancer Cells by a Copper(II)-Phenolate Complex: An In Vitro and In Silico Study.. Molecules. 25(19)
Rajasekaran S, Thatte J, Periasamy J, Javali A, Jayaram M, Sen D, Krishnagopal A, Jayandharan GR, Sambasivan R.  2018.  Infectivity of adeno-associated virus serotypes in mouse testis.. BMC Biotechnol. 18(1):70.
Prabantu VManjveekar, Naveenkumar N, Srinivasan N.  2021.  Influence of Disease-Causing Mutations on Protein Structural Networks.. Front Mol Biosci. 7:620554.
Kalappa DMonnanda, Subramani PAnnamalai, Basavanna SKanchanaha, Ghosh SKumar, Sundaramurthy V, Uragayala S, Tiwari S, Anvikar AR, Valecha N.  2018.  Influence of midgut microbiota in Anopheles stephensi on Plasmodium berghei infections.. Malar J. 17(1):385.
Mam B, Tsitsanou KE, Liggri PGV, Saitta F, Stamati ECV, Mahita J, Leonis G, Drakou CE, Papadopoulos M, Arnaud P et al..  2023.  Influence of pH on indole-dependent heterodimeric interactions between Anopheles gambiae odorant-binding proteins OBP1 and OBP4.. Int J Biol Macromol. :125422.
Rajani P, Rajasekaran C, Vasanthakumari MM, Olsson SB, Ravikanth G, R Shaanker U.  2021.  Inhibition of plant pathogenic fungi by endophytic Trichoderma spp. through mycoparasitism and volatile organic compounds.. Microbiol Res. 242:126595.
Barron HC, Vogels TP, Behrens TE, Ramaswami M.  2017.  Inhibitory engrams in perception and memory.. Proc Natl Acad Sci U S A.
Bhatt T, Dey R, Hegde A, Ketkar AAshok, Pulianmackal AJ, Deb AP, Rampalli S, Jamora C.  2022.  Initiation of wound healing is regulated by the convergence of mechanical and epigenetic cues.. PLoS Biol. 20(9):e3001777.