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Journal Article
Arnold ML, Kunte K.  2017.  Adaptive Genetic Exchange: A Tangled History of Admixture and Evolutionary Innovation.. Trends Ecol Evol.
Sondhi S., Kunte K.  2016.  Butterflies (Lepidoptera) of the Kameng Protected Area Complex, western Arunachal Pradesh, India. Journal of Threatened Taxa. 8:9053–9124.
Kunte K, Roy P, Kalesh S., Kodandaramaia U.  2015.  Butterflies of India. Indian Foundation for Butterflies. 2(10)
Price BWills, Allan ELouise, Marathe K, Sarkar V, Simon C, Kunte K.  2016.  The cicadas (Hemiptera: Cicadidae) of India, Bangladesh, Bhutan, Myanmar, Nepal and Sri Lanka: an annotated provisional catalogue, regional checklist and bibliography.. Biodivers Data J. (4):e8051.
Toussaint EFA, Morinière J, Müller CJ, Kunte K, Turlin B, Hausmann A, Balke M.  2015.  Comparative molecular species delimitation in the charismatic Nawab butterflies (Nymphalidae, Charaxinae, Polyura).. Mol Phylogenet Evol. 91:194-209.
Phalnikar K, Kunte K, Agashe D.  2018.  Dietary and developmental shifts in butterfly-associated bacterial communities.. R Soc Open Sci. 5(5):171559.
Joshi J, Prakash A, Kunte K.  2017.  Evolutionary Assembly of Communities in Butterfly Mimicry Rings.. Am Nat. 189(4):E58-E76.
Kunte K, Agashe D.  2015.  Evolutionary Biology. Current Science. 108:1835-1873.
Bhaumik V., Kunte K.  2018.   Female butterflies modulate investment in reproduction and flight in response to monsoon-driven migrations. OIKOS. 127 (2):285-296.
Jain A., Kunte K, Webb E.L..  2016.  Flower specialization of butterflies and impacts of non-native flower use in a transformed tropical landscape. Biological Conservation. 201:84–191.
Baral S, Arumugam G, Deshmukh R, Kunte K.  2019.  Genetic architecture and sex-specific selection govern modular, male-biased evolution of .. Sci Adv. 5(5):eaau3753.
Deshmukh R, Baral S, Gandhimathi A, Kuwalekar M, Kunte K.  2018.  Mimicry in butterflies: co-option and a bag of magnificent developmental genetic tricks.. Wiley Interdiscip Rev Dev Biol. 7(1)
Marshall DC, Moulds M, Hill KBR, Price BW, Wade EJ, Owen CL, Goemans G, Marathe K, Sarkar V, et al..  2018.  A molecular phylogeny of the cicadas (Hemiptera: Cicadidae) with a review of tribe and subfamily classification. ZOOTAXA. 4424(1):1-64.
Huang Z-F, Chiba H, Jin J, Kizhakke AG, Wang M, Kunte K, Fan X.  2019.  A multilocus phylogenetic framework of the tribe Aeromachini (Lepidoptera: Hesperiidae: Hesperiinae), with implications for taxonomy and biogeography. Systematic Entomology.
Kiran C.G, Kalesh S., Kunte K.  2015.  A new species of damselfly, Protosticta ponmudiensis (Odonata: Zygoptera: Platystictidae) from Ponmudi Hills in the Western Ghats of India. Journal of Threatened Taxa. 7(5):7146-7151.
Kunte K.  2015.  A new species of Hypolycaena (Lepidoptera: Lycenidae) from Arunachal Pradesh, north-eastern India. The Journal of Research on the Lepidoptera. 48:21-27.
Marathe K, Yeshwanth HM, Basu DN, Kunte K.  2017.  A new species of Platypleura Amyot & Audinet-Serville, 1843 (Hemiptera: Cicadidae: Cicadinae) from the Eastern Ghats of Andhra Pradesh, India. Zootaxa. 4311(4):523-536.
Mirza Z.A, Sanap R.V., Kunte K.  2016.  A new species of the genus Thaicharmus Kovařík, 1995 (Scorpiones: Buthidae) from northeast India. Euscorpius. 215:1-11.
Sondhi Y, Kitching IJ, Basu DNath, Kunte K.  2017.  A new species of Theretra Hubner (Lepidoptera: Sphingidae) from the southern Western Ghats, India. ZOOTAXA. 4323(2):185-196.
Joshi S, Kosterin OE, Kunte K.  2016.  New status for Fraser's forgotten Aciagrion approximans krishna, stat. nov (Odonata: Zygoptera: Coenagrionidae) from the Western Ghats of India. International Journal of Odonatology. 19(1-2):41-51.
Yang L, Ravikanthachari N, Mariño-Pérez R, Deshmukh R, Wu M, Rosenstein A, Kunte K, Song H, Andolfatto P.  2019.  Predictability in the evolution of Orthopteran cardenolide insensitivity.. Philos Trans R Soc Lond B Biol Sci. 374(1777):20180246.
Su S, Lim M, Kunte K.  2015.  Prey from the eyes of predators: Color discriminability of aposematic and mimetic butterflies from an avian visual perspective.. Evolution. 69(11):2985-94.
Sondhi S., Karmakar T., Sondhi Y., Jhaveri R., Kunte K.  2016.  Re-discovery of Calinaga aborica Tytler, 1915 (Lepidoptera: Nymphalidae: Calinaginae) from Arunachal Pradesh, India. Journal of Threatened Taxa. 8:8618–8622.
Marathe K, Sanborn AF, Kunte K.  2018.  Revision of the genus Rustia Stål, 1866 (Hemiptera: Cicadidae: Cicadinae) including a generic synonymy, four new combinations, and two new species from the Western Ghats, India.. Zootaxa. 4457(3):431-443.
Gaitonde N, Giri VB, Kunte K.  2016.  'On the rocks': reproductive biology of the endemic toad Xanthophryne (Anura: Bufonidae) from the Western Ghats, India . Journal of Natural History. 50(39-40):2557-2572.
Datta-Roy A, Deepak V., Chaitanya R, Murthy C, Bhosale H, Lajmi A, K. Karanth P, Kunte K, Giri V.  2017.  On the taxonomic status of Eurylepis poonaensis (Squamata: Scincidae): resolving a long-standing conundrum. SALAMANDRA. 53(3):389-397.