Escapee Convict : Last Update 12 Jan 2016

  • Dr.Aditya Gilra

Post-doc,
Laboratory of Computational Neuroscience
(Prof Wulfram Gerstner),
EPFL, Lausanne, Switzerland.
https://people.epfl.ch/aditya.gilra

Publication :-
- Gilra A, Bhalla US. Bulbar microcircuit model predicts connectivity and roles of interneurons in odor coding. PLoS One. 2015 May 5;10(5):e0098045. doi: 10.1371/journal.pone.0098045.

  • Dr. Ashesh Dhawale

Postdoctoral Fellow
Center for Brain Science,
Department of Organismic and Evolutionary Biology.
Harvard University
Cambridge MA
http://www.oeb.harvard.edu/faculty/olveczky/people.html

Publication :-
- Modi MN, Dhawale Ak, Bhalla US. CA1 cell activity sequences emerge after reorganization of network correlation structure during associative learning. Elife (Cambridge). 2014 Mar 25;3:e01982. doi: 10.7554/eLife.01982
- Dhawale AK, Hagiwara A, Bhalla, U.S, Murthy VN, Albeanu DF (2010).Non-redundant odor coding by sister mitral cells revealed by light addressable glomeruli in the mouse. Nat Neurosci. 2010 Nov;13(11):1306-7
- Dhawale, A., and Bhalla, U.S. The network and the synapse: 100 years after Cajal. HFSP Journal.Volume 2, Issue 1, pp. 12-16 (February 2008)

  • Chaitanya Chintaluri

Laboratory of Neuroinformatics
Nencki institute of Experimental Biology,
Warsaw,
Poland
c.chintaluriATnencki.gov.pl

  • Dr. James Premdoss Clement Chelliah,

Faculty Fellow
MBGU Unit
Jawaharla Nehru Centre for Advanced Scientific Research
Bangalore premclementATgmail.com

Publication :-
- Rajan R,Clement JP, Bhalla US. Rats smell in stereo
Science. 2006 Feb 3;311(5761):666-70
(PDF file and supplementary material)

  • Dr. Jyoti Mishra

Assistant Professor,
Neurology & Psychiatry,
UCSF

Publication :-
- Mishra, J. and Bhalla, U.S. Simulations of inositol phosphate metabolism and its interaction with InsP3 mediated calcium release.
Biophys. J.2002 Sep;83(3):1298-1316.
- Sivakumaran S., Hariharaputran S., Mishra J., and Bhalla U.S. The Database of Quantitative Cellular Signaling: Management and analysis of chemical kinetic models of signaling networks.
Bioinformatics.2003 Feb 12;19(3):408-15.
- Soc. for Neurosci. 2004 poster 331.14 'A biophysical neuronal model exploring attention mechanisms in visual cortex: Mishra J., J.M. Fellous,T.J. Sejnowski.

  • Dr. Mehrab Modi

Post-Doc
CSHL

Publication :-
- Modi MN, Dhawale Ak, Bhalla US. CA1 cell activity sequences emerge after reorganization of network correlation structure during associative learning. Elife (Cambridge). 2014 Mar 25;3:e01982. doi: 10.7554/eLife.01982

  • Dr. Parthasarathy K

research associate
Case Western Reserve University,
Cleveland,
Ohio

Publication :-
- Parthasarathy K,  Bhalla US. Laterality and symmetry in rat olfactory behavior and in physiology of olfactory input.  J Neurosci. 2013 Mar 27;33(13):5750-60. doi: 10.1523/JNEUROSCI.1781-12.2013. 
- Khan, A.G., Parthasarathy K. and Bhalla, U.S. (2010). Odor representations in the mammalian olfactory bulb. Wiley Interdiscip Rev Syst Biol Med. 2010 Sep-Oct;2(5):603-11.

  • Dr. Raghav Rajan

Fellow,
Biology Dept. ,
Indian Institute Of Science Education And Research,
Pune

Publication :-
- Rajan R, Clement JP, Bhalla US. Rats smell in stereo.
Science. 2006 Feb 3;311(5761):666-70
(PDF file and supplementary material)

  • Dr. Sachin Deshmukh

Centre For Brain Research
Indian Institute of Science
Bangalore

Publication :-
- Deshmukh SS., Bhalla US. Representation of odor habituation and timing in the hippocampus. J Neurosci. 2003 Mar 01;23(5):1903-15

  • Dr. Sharat J.Vayttaden

Visiting Fellow
National Institute of Allergy and Infectious Diseases (NIAID),
Bethesda,
Maryland
sharatjvATyahoo.co.in

Publication :-
-Rajasethupathy P, Vayttaden SJ, Bhalla US. Systems modeling: a pathway to drug discovery.
Curr Opin Chem Biol. 2005

-HarshaRani GV,Vayttaden SJ, Bhalla US. Electronic data sources for kinetic models of cell signaling.
Journal of Biochemistry(Tokyo) 2005 Vol.137, No.6

-Vayttaden SJ, Ajay SM, Bhalla US. A spectrum of models of signaling pathways.
Chembiochem. 2004 Oct 4;5(10):1365-74.

-Vayttaden SJ, Bhalla US. Developing complex signaling models using GENESIS/Kinetikit.
Sci STKE. 2004 Feb 03;2004(219):p14.

  • Dr. Subhasis Ray

Visiting fellow,
Section on Sensory Coding and Neural Ensembles
NICHD/NIH

Publication :-
-  Gleeson, P., Crook, S., Cannon, R., Hines, M., Billings, G.O., Farinella, M., Morse, T.M., Davison, A.P., Ray, S.,;, Bhalla, U.S., Barnes, S.R., Dimitrova, Y.D., R Angus, Silver, A. and Neuro,M.L.(2010). A language for describing data driven models of neurons and networks with a high degree of biological detail. PLoS Computational BiologyPLoS Comput Biol. 2010 Jun 17;6(6):e1000815
- Ray S., and Bhalla, U.S. PyMOOSE: Interoperable Scripting in Python for MOOSE. Front Neuroinformatics. 2008;2:6. Epub 2008 Dec 19.

 

Last Update Dec 2010

  • Aabid Shariff

Graduate student
Ivan Maly Lab
Department of Computational Biology,
School of Medicine University of Pittsburgh
aabid_2001ATyahoo.com

  • Abhishek Banerjee

D.Phil
Simons Fellow on Autism and Brain Development
The Picower Institute for Learning and Memory
Department of Brain and Cognitive Sciences
Massachusetts Institute of Technology
abhii AT mit DOT edu / abhi.synap AT gmail.com

Working on :-
Role of Inhibition in Visual Cortex Development, Plasticity and Disorder.

  • Adil Ghani Khan
     
  • Adithya Vasudevan

Graduate student
Swiss Federal Institute of Technology (EPFL)
School of Life Sciences (SV)
Institute for biological Engineering and biotechnology (IGBB)
Laboratory for Mechanobiology and Morphogenesis (LMBM)
Bât. AAB0 - Station 15
CH - 1015 Lausanne
Switzerland
screwrodATyahoo.com

  • Amit

Guidant Corporation
2245 Latham Street, #14
Mountain View, CA-94040
USA
phone: 650-814-7423
agar_amATyahoo.com

Working on :-
Involved in the research and development of microwave ablation devices for minimally invasive surgery

  • Anand Chandrasekharan

Graduate student,
Baylor College of Medicine,
Neuroscience dept.
achandATcns.bcm.tmc.edu

Working on :-
Working in Michael C. Crair's lab, doing in vivo electrophysiology in the superior colliculus of mice having retinal projection defects, in an attempt to understand and elucidate the formation of topographic maps in the brain.

  • Anmol Sethy

Graduate Student - Management
Indian Inst of Management -Ahmedabad
sethy.anmol@gmail.com

  • Arnold Hayer

ETH
Zurich (Swiss Federal Institute of Technology),
Insitute of Biochemistry, in the group of Ari Helenius.
Zurich
Switzerland
arnold.hayerATbc.biol.ethz.ch

Working on :-
Quantitative analysis of caveolae dynamics during assembly and endocytosis.

  • Dhanya.P
     
  • Karthika Valli

vkarthika_01ATyahoo.com

  • Karan Vasudeva

karanvasudevaATyahoo.comPublication :- Vasudeva, K. and Bhalla, U.S. Adaptive stochastic-deterministic chemical kinetic simulations. Bioinformatics.2004 Jan 1;20(1):78-84

  • Medha M. Pathak

Postdoctoral Fellow
Harvard Medical School, Boston, MA.
medha_pathakAThms.harvard.edu

Working on :-
Mechanotransduction in hair cells of the inner ear

  • Nils Bluthgen

Prof Hanspeter Herzel,
Theoretical Biology
Humboldt University Berlin
Invalidenstr 43
10115 Berlin
nils.bluethgenATitb.biologie.hu-berlin.de

Working on :-
- Models of RAS-mediated signal transduction
- Ultrasensitivity in Biochemical Networks
- Stochastic Effects and Bistability in ERK-Signaling
- Predicting Functional Targets of Transcription Factors

  • Pradeep Kumar S.

Graduate Student
Calcium Signaling Systems Laboratory,
Systems Biology Research Group,
Department of Life Science,
GIST 1 Oryoung-dong, Buk-gu,
Gwangju 500-712,
Republic of KOREA
pradeepsATvsnl.net

  • Prasoon Agarwal

Prof. Kondaiah Lab
MRDG
IISC
Bangalore
India
prasoonagarATgmail.com

  • Priyamvada Rajasethupathy

Student
Department of Medicine,
COLLEGE OF PHYSICIANS AND SURGEONS: MEDICINE
Columbia University
New York
pribeeATgmail.com

Publication :-
-Rajasethupathy P, Vayttaden SJ, Bhalla US. Systems modeling: a pathway to drug discovery.
Curr Opin Chem Biol. 2005

  • Raamesh Deshpande
     
  • Rajnish Ranjan

ranjan42ATyahoo.com

  • Ravikumar B.M

ravibmrATyahoo.com

  • Roshan R Rammohan

Graduate Student,
Artificial Intelligence Laboratory,
Department of Computer Science,
University of New Mexico,
Albuquerque, New Mexico - 87131. USA
Ph: 505 270 6146.
roshanATcs.unm.edu

Working on :-
In the third year of PhD working with Prof. George Luger.
Work on Loopy Logic, a Stochastic First Order Modeling Language based on Horn Clauses that are associated with Probability distributions, which uses Pearl's loopy belief algorithms and a version of the Expectation Maximisation algorithm to incorporate inference and learning into the tool.
Techniques using different types of Hidden Markov Models and Support Vector Machines for real time fault/event detection in time series data. (mainly from sensors in a mechanical process)

  • Saroj K. Mohapatra, MD

Research Associate
Karmanos Cancer Institute
Wayne State University School of Medicine
110 E. Warren, Room 311
Detroit MI 48201
313-833-0715 x2424
mohapatsATkarmanos.org

Working on :-
Trying to develop a method for early detection of cancer using protein microarrays and bioinformatics

  • Shaista Hussain

shaystaATgmail.com

  • Sridhar Hariharaputran

Ph.D student,
Prof. Dr. Ralf Hofestädt Lab.
Bielefeld University
Faculty of Technology
Bioinformatics Department
P.O.-Box 10 01 31
D-33501 Bielefeld
sridhar_hariharaputranATyahoo.com

Working on :-
Modelling and Simulation of Signalling Pathways

Publication :-
-Sivakumaran, S., Hariharaputran, S., Mishra, J. and Bhalla, U.S. The Database of Quantitative Cellular Signaling: Management and analysis of chemical kinetic models of signaling networks.
Bioinformatics.2003 Feb 12;19(3):408-15.

- Kumar, P., Rao, A.G.,Hariharaputran, S., Chandra, N., Gowda, L.R. Molecular mechanism of dimerization of Bowman-Birk inhibitors. Pivotal role of ASP76 in the dimerzation.
J Biol Chem.2004 Jul 16;279(29):30425-32.

- Prasad, T., Subramanian, T.,Hariharaputran, S., Chaitra, H.S. and Chandra, N.R. Extracting hydrogen-bond signature patterns from protein structure data.
Appl Bioinformatics. 2004;3(2-3):123-35.

- Chaitra, M.G.,Hariharaputran, S., Chandra, N.R., Shaila, M.S. and Nayak R. Defining putative T cell epitopes from PE and PPE families of proteins of Mycobacterium tuberculosis with vaccine potential.
Vaccine. 2005 Jan 26:23(10):1265-72.

  • Sriram M. Ajay

Duke-NUS/A*STAR
Singapore
ajay.mathuruATnrp.a-star.edu.sg
Working on :-
The alarm response in zebrafish.

Publication :-
- Ajay SM, Bhalla US. A role for ERKII in synaptic pattern selectivity on the time-scale of minutes.
Eur J Neurosci. 2004 Nov;20(10):2671-80
- Vayttaden SJ,Ajay SM, Bhalla US. A spectrum of models of signaling pathways.
Chembiochem. 2004 Oct 4;5(10):1365-74.

  • Sudhir Sivakumaran

SISSA/ISAS, via Beirut 2-4,
34014 Trieste.
Italy.
sivaATsissa.it

Publication :-
Sivakumaran, S., Hariharaputran, S., Mishra, J. and Bhalla, U.S. The Database of Quantitative Cellular Signaling: Management and analysis of chemical kinetic models of signaling networks.
Bioinformatics.2003 Feb 12;19(3):408-15.

  • Siji George
     
  • Susana Neves

Graduate student in Ravi Iyengar's lab
Mount Sinai School of Medicine
New York.
susana.nevesATmssm.edu

Working on :-
The role of phosphodiesterases on the regulation of MAPK.

  • Dr. Tara Thiagarajan