Author Title Type [ Year(Desc)]
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2025
Majila K, Arvindekar S, Jindal M, Viswanath S.  2025.  Frontiers in integrative structural modeling of macromolecular assemblies. QRB Discovery. 6:e3.
Abbondanzieri EA, Badrinarayanan AB, Barillà D, Bell SD, Blombach F, Bouet JY, Bulgheresi S, Cao QAD, Dame RT, Dekker C et al..  2025.  Future Directions of the Prokaryotic Chromosome Field.. Mol Microbiol. 123(2):89-100.
Joshi S, Mohapatra S, Kumar D, Joshi A, Iyer M, Sowdhamini R.  2025.  GenDiS3 database: census on the prevalence of protein domain superfamilies of known structure in the entire sequence database.. Database (Oxford). 2025
MacDonald E, Forrester A, Valades-Cruz CA, Madsen TD, Hetmanski JHR, Dransart E, Ng Y, Godbole R, Shp AAkhil, Leconte L et al..  2025.  Growth factor-triggered de-sialylation controls glycolipid-lectin-driven endocytosis.. Nat Cell Biol.
Ansil BR, Viswanathan A, Ramachandran V, Yeshwanth HM, Sanyal A, Ramakrishnan U.  2025.  Host-Pathogen-Vector Continuum in a Changing Landscape: Potential Transmission Pathways for in a Small Mammal Community.. Ecol Evol. 15(4):e71085.
Agrawal R, Pal VKumar, S SK, Menon GJayan, Singh IRaj, Malhotra N, S NC, Ganesh K, Rajmani RS, Seshasayee ASai Narain et al..  2025.  Hydrogen sulfide (H2S) coordinates redox balance, carbon metabolism, and mitochondrial bioenergetics to suppress SARS-CoV-2 infection.. PLoS Pathog. 21(5):e1013164.
Kakani P, Dhamdhere SGanesh, Pant D, Joshi R, Mishra S, Pandey A, Notani D, Shukla S.  2025.  Hypoxia-induced CTCF mediates alternative splicing via coupling chromatin looping and RNA Pol II pause to promote EMT in breast cancer.. Cell Rep. 44(2):115267.
Ansil BR, Sanyal A, Sreenivas D, Garg KM, Ramakrishnan U, Chattopadhyay B.  2025.  Identification of Distinct Rodent-Associated Adenovirus Lineages from Mixed-Use Landscape.. Ecohealth.
Shrivastava A, Kamma H, Das R, Ainavarapu SRama Koti.  2025.  Ionic Liquid-Induced Modulation of Ubiquitin Stability: The Dominant Role of Hydrophobic Interactions.. Langmuir. 41(9):5823-5837.
Prakash A, Weninger J, Singh N, Raman S, Rao M, Kruse K, Ladher RK.  2025.  Junctional force patterning drives both positional order and planar polarity in the auditory epithelia.. Nat Commun. 16(1):3927.
Adhikashreni IS, Joseph AMary, Phadke S, Badrinarayanan A.  2025.  Live tracking of replisomes reveals nutrient-dependent regulation of replication elongation rates in Caulobacter crescentus.. Curr Biol. 35(8):1816-1827.e3.
Gregori M, Pereira GJS, Allen R, West N, Chau K-Y, Cai X, Bostock MP, Bolsover SR, Keller M, Lee C-Y et al..  2025.  Lysosomal TPC2 channels disrupt Ca2+ entry and dopaminergic function in models of LRRK2-Parkinson's disease.
Umar I, Gulzar S-E-J, Sundaramurthy V.  2025.  M. tuberculosis surface sulfoglycolipid SL-1 activates the mechanosensitive channel TRPV4 to enhance lysosomal biogenesis and exocytosis in macrophages. Mol Biol Cell. 36(6):ar76.
Bhattacharyya C, Subramanian K, Uppili B, Biswas NK, Ramdas S, Tallapaka KBharadwaj, Arvind P, Rupanagudi KValli, Maitra A, Nagabandi T et al..  2025.  Mapping genetic diversity with the GenomeIndia project.. Nat Genet. 57(4):767-773.
Kumar A, Shahul AK, Bhalla USingh.  2025.  Mechanisms and implications of high depolarization baseline offsets in conductance-based neuronal models.. J Neurophysiol.
Turner LM, Thorpe CJ, Collins M, Raj S, Shukla T, Spicer JI, Knight ME, Sharma D, Kunte K.  2025.  Metabolic Diversity of a Widely Distributed Tropical Freshwater Crab Is Not Underpinned by Genetic Differences. Journal of Biogeography.
Goyal P, Dhanabalan KV, Scalise M, Friemann R, Indiveri C, Dobson RCJ, Vinothkumar KR, Ramaswamy S.  2025.  Molecular determinants of Neu5Ac binding to a tripartite ATP independent periplasmic (TRAP) transporter.
Soler JAntoni, Singh A, Zerial M, Thutupalli S.  2025.  Motor Function of the Two-Component EEA1-Rab5 Revealed by dcFCCS.. Methods Mol Biol. 2881:87-115.
Rathore S, Gahlot D, Castin J, Pandey A, Arvindekar S, Viswanath S, Thukral L.  2025.  Multiscale simulations reveal architecture of NOTCH protein and ligand specific features.. Biophys J. 124(2):393-407.
Dharmaraaj B, Kunte K.  2025.  Natural and sexual selection and functional roles influence colouration but not the amount of variation in butterfly wing colour patterns.. BMC Ecol Evol. 25(1):11.
Zhang Y, Jindal M, Viswanath S, Sitharam M.  2025.  A New Discrete-Geometry Approach for Integrative Docking of Proteins Using Chemical Cross-Links. Journal of Chemical Information and Modeling. 65(9):44576-4592.
Bansal AKumar, Rao M.  2025.  Nonequilibrium asymmetry in the living cell membrane.. Faraday Discuss.
Krishnamoorthy VK, Hamdani F, Shukla P, Rao RArasala, Anaitullah S, Biligiri KKestur, Kadumuri RVarma, Pothula PReddy, Chavali S, Rampalli S.  2025.  NSD3 protein methylation and stabilization transforms human ES cells into variant state.. Life Sci Alliance. 8(3)
Pilon N, Peixoto F, Ratnam J, Sankaran M.  2025.  Open letter: There are more than just trees and forests to be conserved and restored.
Vivek Hari Sundar Gandhivel, Sotelo-Parrilla P, Raju S, Jha S, Gireesh A, Harshith CY, Gut F, Vinothkumar KR, Berger F, A. Jeyaprakash A et al..  2025.  An Oryza-specific histone H4 variant predisposes H4 lysine 5 acetylation to modulate salt stress responses.
Najeeb N, Jose K, Sreejith K.A, Pulla S, Suresh H.S, Ratnam J, Raghavendra H.V, Chakravarthy D, Chaturvedi RKumar.  2025.  Presence of large trees and tree diversity enhances carbon storage in the Western Ghats. Biological Conservation. 308:111250.
Deshmukh R, Baral S, Kuwalekar M, Kizhakke AGirish, Kunte K.  2025.  Reproductive Barriers and Genomic Hotspots of Adaptation During Allopatric Species Divergence.. Mol Ecol. :e17703.
Da W, Rana SK, Bawa K, Kunte K, Wang Z.  2025.  Roof of the world: Home and border in the genomic era. Molecular Ecology Resources.
Sondhi S, Kallies A, Singh RPratap, Roy ABasu, Kunte K.  2025.  Scientific Note: The first confirmed record of the genus Scoliokona Kallies & Arita, 1998 (Lepidoptera: Sesiidae: Sesiinae) from India. Tropical Lepidoptera Research. 35
Lall S, Balaram P, Mathew MK, Gosavi S.  2025.  Sequence of the SARS-CoV-2 Spike Transmembrane Domain Encodes Conformational Dynamics.. J Phys Chem B. 129(1):194-209.
Srinivasan DJ, Kapgal V, Morris RGM, Chattarji S.  2025.  Social dominance in rats is a determinant of susceptibility to stress.. Proc Natl Acad Sci U S A. 122(19):e2412314122.
Borer E, Seabloom E, Slette I, Wilfahrt P, Asmus A, Sankaran M.  2025.  Species cover, community biomass, and richness in global grasslands from NutNet (2007–2023): Dominant species predict plant richness and biomass in global grasslands.
Reddy PPurushotha, Phale A, Das R.  2025.  Structural analysis of genetic variants of the human tumor suppressor Palb2 coiled-coil domain.. Biosci Rep.
, Kasinathan S, Bhat K, Ratnam J, Sankaran M, Mudappa D, Raman T.RShankar, Osuri AM.  2025.  Structure and dynamics of secondary and mature rainforests: insights from South Asian long-term monitoring plots. Plant Ecology & Diversity.
Virdi S, Sane SP.  2025.  Structure of the Femoral Chordotonal Organ in the Oleander Hawkmoth, Daphnis nerii.. The Journal of Comparative Neurology. 533(2):e70022.
Kumar M, Sane S, Murali A, Thutupalli S.  2025.  Temperature switchable self-propulsion activity of liquid crystalline microdroplets.. Soft Matter.
Laurance WF, Ramakrishnan U.  2025.  Tiger turnaround as populations grow in India.. Nature. 640(8059):603-604.
Chhattani H, Harihar A, Dean R, Yadav A, Patel K, Rana D, Pandit A, Shukla SKumar, Rahim V, Ramakrishnan U.  2025.  Trace DNA from kill sites identifies individual predators. Biological Conservation. 307:111117.
Prasad M, Shetty P, Pal AKumar, Rigó G, Kant K, Zsigmond L, Nagy I, Shivaprasad PV, Szabados L.  2025.  Transcriptional and epigenomic changes in response to PEG-triggered osmotic stress in rapeseed (Brassica napus L.).. J Exp Bot.
CHANDRAN AYIKKARAVIVEK, SAWANT DATTAPRASAD, CHANDRAN REJI, KOPARDE PANKAJ, JOSE SUBINKANIYAMATT, Kunte K.  2025.  Two new species of Merogomphus Martin, 1904 (Odonata: Anisoptera: Gomphidae) from the Western Ghats, India. Zootaxa. 5588(2):201-226.

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