Publications - 2001
Bhalla, U.S. and Iyengar, R. (2001).
Robustness of the bistable behavior of a biological signaling feedback loop.
Chaos, 11, 221-226
Bhalla, U.S. and Iyengar, R. (2001).
Functional modules in biological signalling network.
Novarits Foundation Symposia, 239, 4-13
Bhutani, N. and Udgaonkar, J.B. (2001).
GroEL channels of the folding of thioredoxin along one kinetic route.
Journal of Molecular Biology, 312, 1135-1160
Bhuyan A, Varshney A, Mathew MK (2001).
Resting Membrane Potential as a Marker of Apoptosis: Studies on Xenopus oocytes microinjected
with cytochorme c.
Cell Death & Differentiation 8 : 63 - 69.
Chakrabarti, S., Bhavana, S., Mallika, V. and Sowdhamini, R. (2001)
Protein structural similarities and predication of protein function.
Trends in Chemistry, Ed. By M.M. Srivastava (In Press)
Chatterjee, S., Smith, E.R., Hanada, K., Stevens, V.L. and Mayor, S. (2001)
GPI anchoring leads to sphingolipid-dependent retention of endocytosed proteins in the recycling
EMBO J, 20, 1583-1592.
Chatterjee, S. and Mayor, S (2001)
The GPI-anchor and protein sorting.
Cellular and Molecular Life Sciences, 58, 1-19
Ganesh, C., Zaidi, F.N., Udgaonkar, J.B. and Varadarajan, R. (2001)
Reversible formation of on-pathway microscopic aggregates during the folding of maltose
Protein Science, 10, 1635-1644
Ghazi, A. and VijayRaghavan, K. (2001)
Muscles development in Drosophila.
Proceedings of the Indian National Science Academy (In Press)
R. Gopalakrishna, Ganesh Kumar, B.T. Krishnaprasad, M.K. Mathew, and M. Udaya Kumar (2001).
A Stress Responsive Gene from Groundnut, Gdi-15, Is homologous to Flavonol 3-O-Glucosyltransferase
Involved in Anthocyanin Biosynthesis
Biochem. & Biophys. Rs. Commun. 284, 574 - 579.
Korkaya, M.H., Jameel, S., Gupta, D., Tyagi, S., Kumar, R., Zaffrullah, M., Mazumdar, M., Lal, S.K., Xiaofang,
L., Sehgal, D., Das, S.R. and Shal, D. (2001)
The ORF3 protein of hepatitis E virus binds to Src homology 3 domains and activates.
Journal of Biological Chemistry, 276, 42399-42400
Krishnan, R.V., Varma, R. and Mayor, S. (2001)
Flurescence methods to probe nanometer-scale organization of molecules in cell membranes.
Journal of Fluorescence, 11, 211-226
Lakshimikanth, G., Sridevi, K., Krishnamoorthy, G. and Udgaonkar, J.B. (2001)
Stucture is lost incrementally during unfolding of barster.
Nature Structural Biology, 8, 799-804.
Mallika, V., Bhaduri, A. and Swodhamini, R. (2001)
PASS2: protein structural superfamilies.
Nucleic Acid Research (in Press)
Mukherji, P., Dani, A., Bhatia, S., Singh, N., Rudensky, A., George, A., Bal, V., Mayor, S. and Rath, S.
Efficient presentation of both cytosolic and endogenous transmembrane protein antigens on MHC
class II is dependent on cytoplasmic ptroteolysis.
Journal of Immunology, 167, 2632-2641
Nandi, D. and Sarin, A. (2001).
Trends in basic immunology research - 2001 and beyond.
Current Science, 80, 647-652.
Panicker, M.M. and Rao, M. (2001).
Stem cells and neurogenesis.
In Stem Cell Biology. eds., Marshak, D.R., Gardner, D.K. and Gottlieb, D. Cold Spring Harbor, New York: Cold Spring
Harbor Laboratory Press, 399-438.
Ramaswamy, S. and Rao, M. (2001).
The physics of active membranes
In Comptes Rendus l'Academie des Sciences, Paris Series IV, 2, 817-839.
Rami, B.R. and Udgaonkar, J.B. (2001).
pH jump-induced folding and unfolding studies of barstar: evidence for multiple folding and
Biochemistry , 40, 15267-15279.
Rangarajan, A., Syal, R., Selvarajah, S., Chakrabarti, O., Sarin, A., Krishna, S. (2001).
Activated Notch1 signaling co-operates with papillomavirus oncogenes in transformation and
generates resistance to apoptosis on matrix withdrawal through PKB/Akt. Virology.
Virology, 286, 23-30.
Rangarajan A, Talora C, Nicolas M, Okuyama R, Mammucari C, Oh H, Aster JC, Krishna S, Metzger D, Chambon P,
Miele L, Aguet M, Radtke F and Dotto GP. (2001)
Notch signaling is a direct determinant of keratinocyte growth arrest and entry into differentiation.
EMBO Journal, 20, 3427-3436.
Rao, M. and Sarasij, R.C. (2001).
Active fusion and fission processes on a fluid membrane.
Physical Review Letters, 87, 128101-128104.
Shah, P.K., Buslje, C.M. and Sowdhamini, R. (2001).
Structural determinants of binding and specificity in transforming growth factor-receptor interactions.
PROTEINS: Structure, Function and Genetics, 454, 408-420.
Shah, P.K. and Sowdhamini, R. (2001)
Structural understanding of the transmembrane domains of inositol triphosphate receptors and
ryanodine receptors towards calcium channeling.
Protein Engineering, 14, 867-874.
Sridevi, K. and Udgaonkar, J.B. (2001).
Unfolding rates of barstar determined in native and low denaturant conditions indicate the presence
Biochemistry , 41, 1568-1578.
Sudarsan, V., Anant, S., Guptan, P., VijayRaghavan, K. and Skaer, H. (2001).
Myoblast diversification and ectodermal signalling in Drosophila.
Developmental Cell, 1, 829-839.
Udgaonkar, J.B. (2001).
Entropy in Biology.
Resonance, 6, 61-66.
Varghese, J., Chattopadhaya, S. and Sarin, A. (2001).
Inhibition of p38 Kinase reveals a TNF-alpha-mediated, caspase-dependent, apoptotic death pathway in
a human myelomonocyte cell line.
Journal of Immunology, 166, 6570-6577.
Varghese, J., Radhika, G. and Sarin, A. (2001).
The role of calpain in caspase activation during etoposide induced apoptosis in T cells.
European Journal of Immunology, 31, 2035-2041.
K. Venkatesh, G. Siddhartha, Rohit Joshi, Sonal Patel and Gaiti Hasan (May 2001)
Interactions Between the Inositol 1,4,5-Trisphosphate and Cyclic AMP Signaling Pathways Regulate
Larval Molting in Drosophila
Genetics 158: 309-318.
Vinayagam, A. and Sowdhamini, R. (2001).
DSDBASE: Native and modelled disulphide bonds in proteins.
Nucleic Acids Research - web publication (in press).
Zeng, H., Chattarji, S., Barbarosie, M., Rondi-Reig, L., Philpot, B. D., Miyakawa, T., Bear, M. F. and Tonegawa, S. (2001).
Forebrain-specific calcineurin knockout selectively impairs bidirectional synaptic plasticity and
Cell, 107, 617-629.