1. Blobel GA, Higgs DR, Mitchell JA, Notani D, Young RA. Testing the super-enhancer concept. Nat Rev Genet. 2021 Sep 3. doi: 10.1038/s41576-021-00398-w. 
  2. Mitra R, Richhariya S, Jayakumar S, Notani D, Hasan G. IP3-mediated Ca2+ signals regulate larval to pupal transition under nutrient stress through the H3K36 methyltransferase Set2. Development. 2021 Jun 1;148(11):dev199018. doi: 10.1242/dev.199018. 
  3. Farooq U, Saravanan B, Islam Z, Walavalkar K, Singh AK, Jayani RS, Meel S, Swaminathan S, Notani D. An interdependent network of functional enhancers regulates transcription and EZH2 loading at the INK4a/ARF locus. Cell Rep. 2021 Mar 23;34(12):108898. doi: 10.1016/j.celrep.2021.
  4. Walavalkar K, Saravanan B, Singh AK, Jayani RS, Nair A, Farooq U, Islam Z, Soota D, Mann R, Shivaprasad PV, Freedman ML, Sabarinathan R, Haiman CA, Notani D. A rare variant of African ancestry activates 8q24 lncRNA hub by modulating cancer associated enhancer. Nat Commun. 2020.11(1):3598.doi: 10.1038/s41467-020-17325-y
  5. Walavalkar K, Notani D. Beyond the coding genome: Non-coding mutations and cancer. Frontiers in Bioscience, Landmark. 2020. 25:1825-1835.
  6. Saravanan B, Soota D, Islam Z, Majumdar S, Mann R, Meel S, Farooq U, Walavalkar K, Gayen S, Singh AK, Hannenhalli S, Notani D. Ligand dependent gene regulation by transient ERα clustered enhancers. PLoS Genet. 2020.16(1):e1008516.
  7. RS, Singh A, Notani D. Isolation of Nuclear RNA-Associated Protein Complexes. Methods Mol Biol. 2017;1543:187-193. doi: 10.1007/978-1-4939-6716-2_9.
  8. Li W, Notani D, Rosenfeld MG. Enhancers as non-coding RNA transcription units: recent insights and future perspectives. Nat Rev Genet. 2016 Mar 7. doi: 10.1038/nrg.2016.4
  9. Han Y, Rand KA et al. Prostate Cancer Susceptibility in Men of African Ancestry at 8q24. J Natl Cancer Inst. 2016 Jan 27;108(7). doi: 10.1093/jnci/djv431
  10. Telese F, Ma Q, Perez PM, Notani D, Oh S, Li W, Comoletti D, Ohgi KA, Taylor H, Rosenfeld MG. LRP8-Reelin-Regulated Neuronal Enhancer Signature Underlying Learning and Memory Formation. Neuron. 2015 May 6;86(3):696-710. doi: 10.1016/j.neuron.2015.03.033. Epub 2015 Apr 16.
  11. Li W, Lam MT, Notani D. Enhancer RNAs. Cell Cycle. 2014;13(20):3151-2.doi: 10.4161/15384101.2014.962860.
  12. Skowronska-Krawczyk D, Ma Q, Schwartz M, Scully K, Li W, Liu Z, Taylor H, Tollkuhn J, Ohgi KA, Notani D, Kohwi Y, Kohwi-Shigematsu T and Rosenfeld MG. Required enhancer-matrin-3 network interactions for a homeodomain transcription program. Nature. 2014 Aug 3. doi: 10.1038/nature1357.
  13. Li W*, Notani D*, Ma Q, Tanasa B, Nunez E, Chen AY, Merkurjev D, Zhang J, Ohgi K, Song X, Oh S, Kim H-S, Glass CK, and Rosenfeld MG. Functional Importance of eRNAs for Estrogen-dependent Transcriptional Activation Events. Nature. 2013. 498(7455):516-20. (* Equal Contribution) Recommended by Faculty of 1000 Biology.Comment In: Redmond AM, Carroll JS. Enhancer-derived RNAs: 'spicing up' transcription programs. EMBO J. 2013. 32(15):2096-8. Research Highlight: Carlos A Melo, Nicolas Léveillé, and Reuven Agami. eRNAs reach the heart of transcription. Cell Research. 2013. doi: 10.1038/cr.2013.97.
  14. Dunkel Y, Ong A, Notani D, Mittal Y, Lam M, Mi X, Ghosh P. STAT3 protein up-regulates Gα-interacting vesicle-associated protein (GIV)/Girdin expression, and GIV enhances STAT3 activation in a positive feedback loop during wound healing and tumor invasion/metastasis. J Biol Chem. 2012. 287(50):41667-83.
  15. Notani D, Ramanujam PL, Kumar PP, Gottimukkala KP, Kumar-Sinha C, Galande S.N-terminal PDZ-like domain of chromatin organizer SATB1 contributes towards its function as transcription regulator. J Biosci. 2011. 36(3):461-9.
  16. Harismendy O*, Notani D*, Song X, Rahim NG, Tanasa B, Heintzman N, Ren B, Fu XD, Topol EJ, Rosenfeld MG, Frazer KA. 9p21 DNA variants associated with coronary artery disease impair interferon-γ signaling response. Nature. 2011. 470(7333):264-8. (* Equal Contribution) Recommended by Faculty of 1000 Biology.
  17. Lakshminarayana Reddy CN, Vyjayanti VN, Notani D, Galande S and Kotamraju S. Down-regulation of the global regulator SATB1 by statins in COLO205 colon cancer cells. Molecular Medicine Reports. 2010. 3(5)857-861.
  18. Vempati RK, Jayani RS, Notani D, Sengupta A, Galande S, Haldar D. p300 mediated acetylation of histone H3 lysine 56 functions in DNA damage response in mammals. J Biol Chem. 2010. 285(37):28553-64.
  19. Notani D, Limaye AS, Kumar PP, Galande S. Phosphorylation-Dependent regulation of SATB1, the higher-order chromatin organizer and global gene regulator. Methods Mol Biol. 2010. 647:317-35.
  20. Ahlfors H, Limaye A, Elo LL, Tuomela S, Burute M, Gottimukkala K, Notani D, Rasool O, Galande S, Lahesmaa R. SATB1 dictates expression of multiple genes including IL-5 involved in human T helper cell differentiation. Blood. 2010.116(9):1443-53.
  21. Notani D, Gottimukkala KP, Jayani RS, Limaye A, Damle MV, Mehta S, Purbey PK, Joseph J and Galande S. Global regulator SATB1 recruits β-catenin and mediates Wnt/β-catenin response. PLoS Biol. 2010. 8(1):e1000296. Synopsis: Sedwick, C. SATB1 makes a splash in T cell Wnt signaling. PLoS Biol. 2010. e1000295. doi:10.1371/journal.pbio.1000295.
  22. Purbey PK, Singh S, Notani D, Kumar PP, Limaye AS, Galande S. Acetylation-dependent interaction of SATB1 and CtBP1 mediates transcriptional repression by SATB1. Mol. Cell. Biol. 2009. 29:1321-37.
  23. Galande S, Purbey PK, Notani D, and Kumar PP. The third dimension of gene regulation: Organization of dynamic chromatin loopscape by SATB1. Curr. Opin. Genet. Dev. 2007. 17: 408-417.
  24. Kumar PP, Mehta S, Purbey PK, Notani D, Jayani RS, Purohit HJ, Raje DV, Ravi DS, Bhonde RR, Mitra D, and Galande S. SATB1-Binding Sequences and Alu-Like Motifs Define a Unique Chromatin Context in the Vicinity of Human Immunodeficiency Virus Type 1 Integration Sites. J Virol. 2007. 81:5617-5627.
  25. Kumar PP, Bischof O, Purbey PK, Notani D, Urlaub U, Dejean A, and Galande S. Functional interaction between PML and SATB1 regulated chromatin loop architecture and transcription of the MHC class I locus. Nat. Cell Biol. 2007. 9: 45-56.
  26. Kumar PP, Purbey PK, Sinha CK, Notani D, Limaye A, Jayani RS, and Galande S. Phosphorylation of SATB1, a global gene regulator, acts as a molecular switch regulating its transcriptional activity in vivo. Mol Cell. 2006. 22:231-243.