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Journal Article
Datta-Roy A, Deepak V., Chaitanya R, Murthy C, Bhosale H, Lajmi A, K. Karanth P, Kunte K, Giri V.  2017.  On the taxonomic status of Eurylepis poonaensis (Squamata: Scincidae): resolving a long-standing conundrum. SALAMANDRA. 53(3):389-397.
Gaitonde N, Giri VB, Kunte K.  2016.  'On the rocks': reproductive biology of the endemic toad Xanthophryne (Anura: Bufonidae) from the Western Ghats, India . Journal of Natural History. 50(39-40):2557-2572.
Marathe K, Sanborn AF, Kunte K.  2018.  Revision of the genus Rustia Stål, 1866 (Hemiptera: Cicadidae: Cicadinae) including a generic synonymy, four new combinations, and two new species from the Western Ghats, India.. Zootaxa. 4457(3):431-443.
Sondhi S., Karmakar T., Sondhi Y., Jhaveri R., Kunte K.  2016.  Re-discovery of Calinaga aborica Tytler, 1915 (Lepidoptera: Nymphalidae: Calinaginae) from Arunachal Pradesh, India. Journal of Threatened Taxa. 8:8618–8622.
Su S, Lim M, Kunte K.  2015.  Prey from the eyes of predators: Color discriminability of aposematic and mimetic butterflies from an avian visual perspective.. Evolution. 69(11):2985-94.
Yang L, Ravikanthachari N, Mariño-Pérez R, Deshmukh R, Wu M, Rosenstein A, Kunte K, Song H, Andolfatto P.  2019.  Predictability in the evolution of Orthopteran cardenolide insensitivity.. Philos Trans R Soc Lond B Biol Sci. 374(1777):20180246.
Joshi S, Kosterin OE, Kunte K.  2016.  New status for Fraser's forgotten Aciagrion approximans krishna, stat. nov (Odonata: Zygoptera: Coenagrionidae) from the Western Ghats of India. International Journal of Odonatology. 19(1-2):41-51.
Sondhi Y, Kitching IJ, Basu DNath, Kunte K.  2017.  A new species of Theretra Hubner (Lepidoptera: Sphingidae) from the southern Western Ghats, India. ZOOTAXA. 4323(2):185-196.
Mirza Z.A, Sanap R.V., Kunte K.  2016.  A new species of the genus Thaicharmus Kovařík, 1995 (Scorpiones: Buthidae) from northeast India. Euscorpius. 215:1-11.
Marathe K, Yeshwanth HM, Basu DN, Kunte K.  2017.  A new species of Platypleura Amyot & Audinet-Serville, 1843 (Hemiptera: Cicadidae: Cicadinae) from the Eastern Ghats of Andhra Pradesh, India. Zootaxa. 4311(4):523-536.
Kunte K.  2015.  A new species of Hypolycaena (Lepidoptera: Lycenidae) from Arunachal Pradesh, north-eastern India. The Journal of Research on the Lepidoptera. 48:21-27.
Kiran C.G, Kalesh S., Kunte K.  2015.  A new species of damselfly, Protosticta ponmudiensis (Odonata: Zygoptera: Platystictidae) from Ponmudi Hills in the Western Ghats of India. Journal of Threatened Taxa. 7(5):7146-7151.
Huang Z-F, Chiba H, Jin J, Kizhakke AG, Wang M, Kunte K, Fan X.  2019.  A multilocus phylogenetic framework of the tribe Aeromachini (Lepidoptera: Hesperiidae: Hesperiinae), with implications for taxonomy and biogeography. Systematic Entomology.
Marshall DC, Moulds M, Hill KBR, Price BW, Wade EJ, Owen CL, Goemans G, Marathe K, Sarkar V, et al..  2018.  A molecular phylogeny of the cicadas (Hemiptera: Cicadidae) with a review of tribe and subfamily classification. ZOOTAXA. 4424(1):1-64.
Deshmukh R, Baral S, Gandhimathi A, Kuwalekar M, Kunte K.  2018.  Mimicry in butterflies: co-option and a bag of magnificent developmental genetic tricks.. Wiley Interdiscip Rev Dev Biol. 7(1)
Baral S, Arumugam G, Deshmukh R, Kunte K.  2019.  Genetic architecture and sex-specific selection govern modular, male-biased evolution of .. Sci Adv. 5(5):eaau3753.
Jain A., Kunte K, Webb E.L..  2016.  Flower specialization of butterflies and impacts of non-native flower use in a transformed tropical landscape. Biological Conservation. 201:84–191.
Bhaumik V., Kunte K.  2018.   Female butterflies modulate investment in reproduction and flight in response to monsoon-driven migrations. OIKOS. 127 (2):285-296.
Kunte K, Agashe D.  2015.  Evolutionary Biology. Current Science. 108:1835-1873.
Joshi J, Prakash A, Kunte K.  2017.  Evolutionary Assembly of Communities in Butterfly Mimicry Rings.. Am Nat. 189(4):E58-E76.
Phalnikar K, Kunte K, Agashe D.  2018.  Dietary and developmental shifts in butterfly-associated bacterial communities.. R Soc Open Sci. 5(5):171559.
Toussaint EFA, Morinière J, Müller CJ, Kunte K, Turlin B, Hausmann A, Balke M.  2015.  Comparative molecular species delimitation in the charismatic Nawab butterflies (Nymphalidae, Charaxinae, Polyura).. Mol Phylogenet Evol. 91:194-209.
Price BWills, Allan ELouise, Marathe K, Sarkar V, Simon C, Kunte K.  2016.  The cicadas (Hemiptera: Cicadidae) of India, Bangladesh, Bhutan, Myanmar, Nepal and Sri Lanka: an annotated provisional catalogue, regional checklist and bibliography.. Biodivers Data J. (4):e8051.
Kunte K, Roy P, Kalesh S., Kodandaramaia U.  2015.  Butterflies of India. Indian Foundation for Butterflies. 2(10)
Sondhi S., Kunte K.  2016.  Butterflies (Lepidoptera) of the Kameng Protected Area Complex, western Arunachal Pradesh, India. Journal of Threatened Taxa. 8:9053–9124.
Arnold ML, Kunte K.  2017.  Adaptive Genetic Exchange: A Tangled History of Admixture and Evolutionary Innovation.. Trends Ecol Evol.