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A
Adurthi S, Kumar MM, Vinodkumar HS, Mukherjee G, Krishnamurthy H, K Acharya K, Bafna UD, Uma DK, Abhishekh B, Krishna S et al..  2017.  Oestrogen Receptor-α binds the FOXP3 promoter and modulates regulatory T-cell function in human cervical cancer.. Sci Rep. 7(1):17289.
Agarwal I, Mirza ZA, Pal S, Maddock ST, Mishra A, Bauer AM.  2016.  A new species of the Cyrtodactylus (Geckoella) collegalensis (Beddome, 1870) complex (Squamata: Gekkonidae) from Western India.. Zootaxa. 4170(2):339-354.
Agarwal I, Ramakrishnan U.  2017.  A phylogeny of open-habitat lizards (Squamata: Lacertidae: Ophisops) supports the antiquity of Indian grassy biomes. JOURNAL OF BIOGEOGRAPHY . 44(9):2021-2032.
Agarwal I, Khandekar A, Ramakrishnan U, Vyas R, Giri VB.  2018.  Two new species of the Ophisops microlepis (Squamata: Lacertidae) complex from northwestern India with a key to Indian Ophisops . JOURNAL OF NATURAL HISTORY . 52(13-16):819-847.
Agarwal I, Mahony S, Giri VB, Chaitanya R, Bauer AM.  2018.  Two new species of bent toed geckos, Cyrtodactylus Gray, 1827 (Squamata: Gekkonidae) from Northeast India with comments on name-bearing types from the region . ZOOTAXA. 4420 (3):334-356.
Agashe D, Sane M, Phalnikar K, Diwan GD, Habibullah A, Martinez-Gomez NCecilia, Sahasrabuddhe V, Polachek W, Wang J, Chubiz LM et al..  2016.  Large-Effect Beneficial Synonymous Mutations Mediate Rapid and Parallel Adaptation in a Bacterium.. Mol Biol Evol.
Agashe D.  2017.  The road not taken: Could stress-specific mutations lead to different evolutionary paths? PLoS Biol. 15(6):e2002862.
Agavekar G, Garcia FHita, Economo EP.  2017.  Taxonomic overview of the hyperdiverse ant genus Tetramorium Mayr (Hymenoptera, Formicidae) in India with descriptions and X-ray microtomography of two new species from the Andaman Islands.. PeerJ. 5:e3800.
Aghera N, Udgaonkar JB.  2017.  Stepwise Assembly of β-Sheet Structure during the Folding of an SH3 Domain Revealed by a Pulsed Hydrogen Exchange Mass Spectrometry Study.. Biochemistry.
Agrawal T, Hasan G.  2015.  Maturation of a central brain flight circuit in Drosophila requires Fz2/Ca²⁺ signaling.. Elife. 4
Aloysius A, DasGupta R, Dhawan J.  2018.  The transcription factor Lef1 switches partners from β-catenin to Smad3 during muscle stem cell quiescence.. Sci Signal. 11(540)
Amanullah A, Mishra R, Upadhyay A, Reddy PP, Das R, Mishra A.  2018.  Indomethacin elicits proteasomal dysfunctions develops apoptosis through mitochondrial abnormalities.. J Cell Physiol. 233(2):1685-1699.
Ammothumkandy A, Maliekal TThomas, Bose MVahanan, Rajkumar T, Shirley S, Thejaswini B, Giri VG, Krishna S.  2016.  CD66 and CD49f expressing cells are associated with distinct neoplastic phenotypes and progression in human cervical cancer.. Eur J Cancer. 60:166-178.
Anil S, Rawson D, Zhang T.  2018.  Development of molecular markers for zebrafish (Danio rerio) ovarian follicle growth assessment following in-vitro culture in cryopreservation studies.. Cryobiology. 83:75-83.
Arnold ML, Kunte K.  2017.  Adaptive Genetic Exchange: A Tangled History of Admixture and Evolutionary Innovation.. Trends Ecol Evol.
Arya D, Sachithanandan SP, Ross C, Palakodeti D, Li S, Krishna S.  2017.  MiRNA182 regulates percentage of myeloid and erythroid cells in chronic myeloid leukemia.. Cell Death Dis. 8(1):e2547.
Ashe S, Malhotra V, Raghu P.  2018.  Protein kinase D regulates metabolism and growth by controlling secretion of insulin like peptide.. Dev Biol. 434(1):175-185.
Ashok A, Naaz S, Kota LNarayanan, Sen S, Purushottam M, Faruq M, Kumari R, Yadav V, Kannan R, Jain S et al..  2018.  Does retinoic acid reverse cell cycle dysregulation in Alzheimer's disease lymphocytes? Asian J Psychiatr.
Ashwini N, Sajeevan RSivarajan, Udayakumar M, Nataraja KN.  2018.  Identification of splice variant of in ssp. genotypes under salinity stress.. 3 Biotech. 8(8):345.
B
Babbitt PC, Bagos PG, Bairoch A, Bateman A, Chatonnet A, Chen MJinan, Craik DJ, Finn RD, Gloriam D, Haft DH et al..  2015.  Creating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreat.. Database (Oxford). 2015:bav063.
Badarinath K, Dutta A, Hegde A, Pincha N, Gund R, Jamora C.  2018.  Interactions Between Epidermal Keratinocytes, Dendritic Epidermal T-Cells, and Hair Follicle Stem Cells.. Methods Mol Biol.
Badrinarayanan A, Le TBK, Spille J-H, Cisse II, Laub MT.  2017.  Global analysis of double-strand break processing reveals in vivo properties of the helicase-nuclease complex AddAB.. PLoS Genet. 13(5):e1006783.
Bakthavachalu B, Huelsmeier J, Sudhakaran IP, Hillebrand J, Singh A, Petrauskas A, Thiagarajan D, Sankaranarayanan M, Mizoue L, Anderson EN et al..  2018.  RNP-Granule Assembly via Ataxin-2 Disordered Domains Is Required for Long-Term Memory and Neurodegeneration.. Neuron. 98(4):754-766.e4.
Balakrishnan SS, Basu U, Shinde D, Thakur R, Jaiswal M, Raghu P.  2018.  Regulation of PI4P levels by PI4KIIIα during G-protein coupled PLC signaling in photoreceptors.. J Cell Sci.
Balakrishnan SS, Basu U, Raghu P.  2015.  Phosphoinositide signalling in Drosophila.. Biochim Biophys Acta. 1851(6):770-84.
Baliga C, Majhi S, Mondal K, Bhattacharjee A, VijayRaghavan K, Varadarajan R.  2016.  Rational elicitation of cold-sensitive phenotypes.. Proc Natl Acad Sci U S A. 113(18):E2506-15.
Banerjee DSankar, Munjal A, Lecuit T, Rao M.  2017.  Actomyosin pulsation and flows in an active elastomer with turnover and network remodeling.. Nat Commun. 8(1):1121.
Banerjee A, Grazon C, Nadal B, Pons T, Krishnan Y, Dubertret B.  2015.  Fast, Efficient, and Stable Conjugation of Multiple DNA Strands on Colloidal Quantum Dots.. Bioconjug Chem. 26(8):1582-9.
Banerjee A, Marbach F, Anselmi F, Koh MS, Davis MB, da Silva PGarcia, Delevich K, Oyibo HK, Gupta P, Li B et al..  2015.  An Interglomerular Circuit Gates Glomerular Output and Implements Gain Control in the Mouse Olfactory Bulb.. Neuron. 87(1):193-207.
Bangalore MPrakash, Adhikarla S, Mukherjee O, Panicker MM.  2017.  Genotoxic Effects of Culture Media on Human Pluripotent Stem Cells.. Sci Rep. 7:42222.
Bansal D, Kulkarni J, Nadahalli K, Lakshmanan V, Krishna S, Sasidharan V, Geo J, Dilipkumar S, Pasricha R, Gulyani A et al..  2017.  Cytoplasmic poly (A) binding protein (PABPC2) critically regulates epidermal maintenance and turnover in planarian Schmidtea mediterranea.. Development.
Barah P, N MNaika B, Jayavelu NDoni, Sowdhamini R, Shameer K, Bones AM.  2016.  Transcriptional regulatory networks in Arabidopsis thaliana during single and combined stresses.. Nucleic Acids Res. 44(7):3147-64.
Baral A, Shruthi KS, Mathew MK.  2015.  Vesicular trafficking and salinity responses in plants.. IUBMB Life. 67(9):677-86.
Baral A, Irani NG, Fujimoto M, Nakano A, Mayor S, Mathew MK.  2015.  Salt-induced remodeling of spatially restricted clathrin-independent endocytic pathways in Arabidopsis root.. Plant Cell. 27(4):1297-315.
Barnosky AD, Hadly EA, Gonzalez P, Head J, P Polly D, A Lawing M, Eronen JT, Ackerly DD, Alex K, Biber E et al..  2017.  Merging paleobiology with conservation biology to guide the future of terrestrial ecosystems.. Science. 355(6325)
Barron HC, Vogels TP, Behrens TE, Ramaswami M.  2017.  Inhibitory engrams in perception and memory.. Proc Natl Acad Sci U S A.
Bauer G, Fakhri N, Kicheva A, Kondev J, Kruse K, Noji H, Riveline D, Saunders TE, Thattai M, Wieschaus E.  2018.  The Science of Living Matter for Tomorrow.. Cell Syst. 6(4):400-402.
Bendigiri C, Harini K, Yenkar S, Zinjarde S, Sowdhamini R, RaviKumar A.  2018.  Evaluating Ylehd, a recombinant epoxide hydrolase from Yarrowia lipolytica as a potential biocatalyst for the resolution of benzyl glycidyl ether. RSC ADVANCES. 8(23):12918-12926.
Bendtsen KMoss, Jensen MH, Krishna S, Semsey S.  2015.  The role of mRNA and protein stability in the function of coupled positive and negative feedback systems in eukaryotic cells.. Sci Rep. 5:13910.
Bhagavan H, Muthmann O, Brockmann A.  2016.  Structural and temporal dynamics of the bee curtain in the open-nesting honey bee species, Apis florea. Apidologie.
Bhagavathula NChaitanya, Kumar M, Krishnappa C.  2016.  A simple non-invasive technique for venom milking from a solitary wasp Delta conoideum Gmelin (Hymenoptera: Vespidae).. Toxicon. 109:4-6.
Bhalla US.  2017.  Dendrites, Deep Learning, and Sequences in the Hippocampus.. Hippocampus.
Bhalla USingh.  2017.  Synaptic input sequence discrimination on behavioral time-scales mediated by reaction-diffusion chemistry in dendrites.. Elife. 6
Bhatia S, Krishnamoorthy G, Udgaonkar JB.  2018.  Site-specific time-resolved FRET reveals local variations in the unfolding mechanism in an apparently two-state protein unfolding transition.. Phys Chem Chem Phys. 20(5):3216-3232.
Bhatia D, Arumugam S, Nasilowski M, Joshi H, Wunder C, Chambon V, Prakash V, Grazon C, Nadal B, Maiti PK et al..  2016.  Quantum dot-loaded monofunctionalized DNA icosahedra for single-particle tracking of endocytic pathways.. Nat Nanotechnol.
Bhattacharya M, Isvaran K, Balakrishnan R.  2017.  A statistical approach to understanding reproductive isolation in two sympatric species of tree crickets.. J Exp Biol. 220(Pt 7):1222-1232.
Bhattacharyya U, Bhalla USingh.  2015.  Robust and Rapid Air-Borne Odor Tracking without Casting(1,2,3).. eNeuro. 2(6)
Bhaumik V., Kunte K.  2018.   Female butterflies modulate investment in reproduction and flight in response to monsoon-driven migrations. OIKOS. 127 (2):285-296.
Bindal G, Krishnamurthi R, Seshasayee ASai Narain, Rath D.  2017.  CRISPR-Cas-Mediated Gene Silencing Reveals RacR To Be a Negative Regulator of YdaS and YdaT Toxins in Escherichia coli K-12.. mSphere. 2(6)
Bohra AAsgar, Kallman BR, Reichert H, VijayRaghavan K.  2018.  Identification of a Single Pair of Interneurons for Bitter Taste Processing in the Drosophila Brain.. Curr Biol.
Bopardikar I, Sutaria D, Sule M, Patankar V, Klinck H.  2018.  Description and classification of Indian Ocean humpback dolphin (Sousa plumbea) whistles recorded off the Sindhudurg coast of Maharashtra, India . Marine Mammel Science. 34(3):755-776.
Borah B, Quader S, Srinivasan U.  2018.  Responses of interspecific associations in mixed-species bird flocks to selective logging. Journal of Applied Ecology. 55(4):1637-1646.
Brocke E, Djurfeldt M, Bhalla US, Kotaleski JHellgren, Hanke M.  2017.  Multirate method for co-simulation of electrical-chemical systems in multiscale modeling.. J Comput Neurosci.
Brocke E, Bhalla US, Djurfeldt M, Kotaleski JHellgren, Hanke M.  2016.  Efficient Integration of Coupled Electrical-Chemical Systems in Multiscale Neuronal Simulations.. Front Comput Neurosci. 10:97.
Broom A, Gosavi S, Meiering EM.  2015.  Protein unfolding rates correlate as strongly as folding rates with native structure.. Protein Sci. 24(4):580-7.
Burrows M, Ghosh A, Yeshwanth HM, Dorosenko M, Sane SP.  2018.  Effectiveness and efficiency of two distinct mechanisms for take-off in a derbid planthopper insect.. J Exp Biol.
C
Caicedo JC, Cooper S, Heigwer F, Warchal S, Qiu P, Molnar C, Vasilevich AS, Barry JD, Bansal HSingh, Kraus O et al..  2017.  Data-analysis strategies for image-based cell profiling.. Nat Methods. 14(9):849-863.
Caleb JTD, Sanap R.V., Patel KG, Sudhikumar AV.  2018.  First description of the female of Chrysilla volupe (Karsch, 1879) (Araneae: Salticidae: Chrysillini) from India, with notes on the species’ distribution and life history. Arthropoda Selecta. 27(2):143-153.
Cha DH, Olsson SB, Yee WL, Goughnour RB, Hood GR, Mattsson M, Schwarz D, Feder JL, Linn CE.  2017.  Identification of Host Fruit Volatiles from Snowberry (Symphoricarpos albus), Attractive to Rhagoletis zephyria Flies from the Western United States.. J Chem Ecol.
Chaitanya R., Lajmi A, Giri VB.  2018.   A new cryptic, rupicolous species of Hemidactylus Oken, 1817 (Squamata: Gekkonidae) from Meghamalai, Tamil Nadu, India. ZOOTAXA. 4374(1):49-70.
Chaitanya R, Giri VB, Deepak V..  2017.  On the recent designation of a neotype for the taxon Calotes versicolor (Daudin, 1802) (Reptilia: Agamidae). Zootaxa. 4317(3):585-587.
Chakrabarti P, Kolay S, Yadav S, Kumari K, Nair A, Trivedi D, Raghu P.  2015.  A dPIP5K dependent pool of phosphatidylinositol 4,5 bisphosphate (PIP2) is required for G-protein coupled signal transduction in Drosophila photoreceptors.. PLoS Genet. 11(1):e1004948.
Chakrabarti KS, Li J, Das R, R Byrd A.  2017.  Conformational Dynamics and Allostery in E2:E3 Interactions Drive Ubiquitination: gp78 and Ube2g2.. Structure.
Chakraborty S, Hasan G.  2017.  Spontaneous Ca(2+) Influx in Drosophila Pupal Neurons Is Modulated by IP3-Receptor Function and Influences Maturation of the Flight Circuit.. Front Mol Neurosci. 10:111.
Chakraborty P, Chattarji S.  2018.  Timing is everything: differential effects of chronic stress on fear extinction.. Psychopharmacology (Berl).
Chakraborty D, Ramakrishnan U, Sinha A.  2015.  Quaternary climate change and social behavior shaped the genetic differentiation of an endangered montane primate from the southern edge of the Tibetan Plateau.. Am J Primatol. 77(3):271-84.
Chakraborty S, Krishnan Y.  2017.  A structural map of oncomiR-1 at single-nucleotide resolution.. Nucleic Acids Res. 45(16):9694-9705.
Chakraborty S, Hasan G.  2018.  Store-Operated Ca Entry in Drosophila Primary Neuronal Cultures.. Methods Mol Biol. 1843:125-136.
Chakraborty S, Deb BK, Chorna T, Konieczny V, Taylor CW, Hasan G.  2016.  Mutant IP3 receptors attenuate store-operated Ca2+ entry by destabilizing STIM-Orai interactions in Drosophila neurons.. J Cell Sci.
Chakravarthi A, Rajus S, Kelber A, Dacke M, Baird E.  2018.  Differences in spatial resolution and contrast sensitivity of flight control in the honeybees and .. J Exp Biol.
Chakravarty R, Chattopadhyay B, Ramakrishnan U.  2018.  Comparative Population Structure in Species of Bats Differing in Ecology and Morphology in the Andaman Islands, India. Acta Chiropterologica. 20(1):85-98.
Chanam J, Borges RM.  2017.  Cauline domatia of the ant-plant Humboldtia brunonis (Fabaceae). FLORA. 236-237
Chandrasegaran K, Kandregula SRao, Quader S, Juliano SA.  2018.  Context-dependent interactive effects of non-lethal predation on larvae impact adult longevity and body composition.. PLoS One. 13(2):e0192104.
Chandrasegaran K, Singh A, Laha M, Quader S.  2018.  Playing it safe? Behavioural responses of mosquito larvae encountering a fish predator ETHOLOGY ECOLOGY & EVOLUTION. 30(1):70-87.
Chattarji S, Tomar A, Suvrathan A, Ghosh S, Rahman MMostafizur.  2015.  Neighborhood matters: divergent patterns of stress-induced plasticity across the brain.. Nat Neurosci. 18(10):1364-75.
Chattopadhyay B, Garg KM, Kumar AKVinoth, D Doss PSwami, Rheindt FE, Kandula S, Ramakrishnan U.  2016.  Genome-wide data reveal cryptic diversity and genetic introgression in an Oriental cynopterine fruit bat radiation.. BMC Evol Biol. 16:41.
Chaturvedi D, Reichert H, Gunage RD, VijayRaghavan K.  2017.  Identification and functional characterization of muscle satellite cells in Drosophila.. Elife. 6
Chib S, Das S, Venkatesan S, Seshasayee ASN, Thattai M.  2018.  Using stochastic cell division and death to probe minimal units of cellular replication. New Journal of Physics. 20(035004)
Chib S, Ali F, Seshasayee ASai Narain.  2017.  Genomewide Mutational Diversity in Escherichia coli Population Evolving in Prolonged Stationary Phase.. mSphere. 2(3)
Choudhary B, Kamak M, Ratnakaran N, Kumar J, Awasthi A, Li C, Nguyen K, Matsumoto K, Hisamoto N, Koushika SP.  2017.  UNC-16/JIP3 regulates early events in synaptic vesicle protein trafficking via LRK-1/LRRK2 and AP complexes.. PLoS Genet. 13(11):e1007100.
Choudhury SDey, Mushtaq Z, Reddy-Alla S, Balakrishnan SS, Thakur RS, Krishnan KS, Raghu P, Ramaswami M, Kumar V.  2016.  σ2-Adaptin Facilitates Basal Synaptic Transmission and Is Required for Regenerating Endo-Exo Cycling Pool Under High-Frequency Nerve Stimulation in Drosophila.. Genetics. 203(1):369-85.
Choudhury SDey, Mushtaq Z, Reddy-Alla S, Balakrishnan SS, Thakur RS, Krishnan KS, Raghu P, Ramaswami M, Kumar V.  2016.  sigma(2)-Adaptin Facilitates Basal Synaptic Transmission and Is Required for Regenerating Endo-Exo Cycling Pool Under High-Frequency Nerve Stimulation in Drosophila. GENETICS. 1
Cockcroft S, Raghu P.  2016.  Topological organisation of the phosphatidylinositol 4,5-bisphosphate-phospholipase C resynthesis cycle: PITPs bridge the ER-PM gap.. Biochem J. 473(23):4289-4310.
Cockcroft S, Raghu P.  2018.  Phospholipid transport protein function at organelle contact sites.. Curr Opin Cell Biol. 53:52-60.
D
D'Souza MNinochka, Gowda NKumar Chan, Tiwari V, Babu ROttakandat, Anand P, Dastidar SGhosh, Singh R, Selvaraja B, Pal R, Ramesh A et al..  2018.  FMRP Interacts with C/D Box snoRNA in the Nucleus and Regulates Ribosomal RNA Methylation.. iScience. 9:399-411.
D'Souza F, Pudakalakatti SM, Uppangala S, Honguntikar S, Salian SRaj, Kalthur G, Pasricha R, Appajigowda D, Atreya HS, Adiga SKumar.  2016.  Unraveling the association between genetic integrity and metabolic activity in pre-implantation stage embryos.. Sci Rep. 6:37291.
Dahal N, Lissovsky AA, Lin Z, Solari K, Hadly EA, Zhan X, Ramakrishnan U.  2017.  Genetics, morphology and ecology reveal a cryptic pika lineage in the Sikkim Himalaya.. Mol Phylogenet Evol. 106:55-60.
Das A, Polley A, Rao M.  2016.  Phase Segregation of Passive Advective Particles in an Active Medium.. Phys Rev Lett. 116(6):068306.
Das S, Singh RRaj, Shivaprasad PV.  2017.  Artificial Induction and Maintenance of Epigenetic Variations in Plants. Plant Gene Silencing: Mechanisms and Applications. :59-75.
Das T, Ganguly S, Sengupta S, Rao M.  2015.  Pre-yield non-affine fluctuations and a hidden critical point in strained crystals.. Sci Rep. 5:10644.
Das S, Hegde A, Shivaprasad PV.  2018.  Molecular characterization of a new begomovirus infecting Synedrella nodiflora in South India.. Arch Virol.
Das SG, Rao M, Iyengar G.  2018.  Cascade of transitions in molecular information theory. Journal of Statistical Mechanics: Theory and Experiment. Art No. 093402
Das SG, Rao M, Iyengar G.  2017.  Universal lower bound on the free-energy cost of molecular measurements.. Phys Rev E. 95(6-1):062410.
Dash PKumar, Pattabiraman C, Tandel K, Sharma S, Kumar JS, Siddappa S, Gowda M, Krishna S, Parida M.  2018.  Recovery of Five Complete Influenza A(H1N1)pdm09 Genome Sequences from the 2015 Influenza Outbreak in India by Metagenomic Sequencing.. Genome Announc. 6(26)
Datta V, Siddharthan R, Krishna S.  2018.  Detection of cooperatively bound transcription factor pairs using ChIP-seq peak intensities and expectation maximization.. PLoS One. 13(7):e0199771.
Datta-Roy A, Deepak V., Chaitanya R, Murthy C, Bhosale H, Lajmi A, K. Karanth P, Kunte K, Giri V.  2017.  On the taxonomic status of Eurylepis poonaensis (Squamata: Scincidae): resolving a long-standing conundrum. SALAMANDRA. 53(3):389-397.
Deb BKumar, Hasan G.  2018.  SEPT7-mediated regulation of Ca entry through Orai channels requires other septin subunits.. Cytoskeleton (Hoboken).
Deb BK, Hasan G.  2016.  Regulation of Store-Operated Ca(2+) Entry by Septins.. Front Cell Dev Biol. 4:142.
Deb BK, Pathak T, Hasan G.  2016.  Store-independent modulation of Ca(2+) entry through Orai by Septin 7.. Nat Commun. 7
Deepak V., Giri VB, Asif M, Dutta SKumar, Vyas R, Zambre AM, Bhosale H, K. Karanth P.  2016.  Systematics and phylogeny of Sitana (Reptilia: Agamidae) of Peninsular India, with the description of one new genus and five new species. Contributions to Zoology. 85(1):67-111.

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