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Sabareesan AThody, Udgaonkar JB. 2017. The G126V Mutation in the Mouse Prion Protein Hinders Nucleation-Dependent Fibril Formation by Slowing Initial Fibril Growth and by Increasing the Critical Concentration.. Biochemistry. 56(44):5931-5942.
Sabareesan AThody, Singh J, Roy S, Udgaonkar JB, Mathew MK. 2016. The Pathogenic A116V Mutation Enhances Ion-Selective Channel Formation by Prion Protein in Membranes.. Biophys J. 110(8):1766-76.
Sabareesan AT, Udgaonkar JB. 2016. Pathogenic mutations within the disordered palindromic region of the prion protein induce structure therein and accelerate the formation of misfolded oligomers.. J Mol Biol.
Sabareesan AThody, Mathew MK, Udgaonkar JB. 2018. Mechanism of aggregation and membrane interactions of mammalian prion protein.. Biochim Biophys Acta.
Sabarinathan R, Anthon C, Gorodkin J, Seemann SE. 2018. Multiple Sequence Alignments Enhance Boundary Definition of RNA Structures.. Genes (Basel). 9(12)
Sachdev D., Kumar V., Maheshwari PH, Pesricha R. 2016. Silver based nanomaterial, as a selective colorimetric sensor for visual detection of post harvest spoilage in onion. Sensors and Actuators B: Chemical. 228(2):471–479.
Sachdeva K, Goel M, Sudhakar M, Mehta M, Raju R, Raman K, Singh A, Sundaramurthy V. 2020. Mycobacterium tuberculosis ( Mtb) lipid mediated lysosomal rewiring in infected macrophages modulates intracellular Mtb trafficking and survival. J Biol Chem. 295(27):9192-9210.
Sachdeva H, Barma M, Rao M. 2016. Nonequilibrium description of de novo biogenesis and transport through Golgi-like cisternae.. Sci Rep. 6:38840.
Sachdeva K, Goel M, Sundaramurthy V. 2020. Heterogeneity in the endocytic capacity of individual macrophage in a population determines its subsequent phagocytosis, infectivity and subcellular trafficking.. Traffic. 21(8):522-533.
Sachdeva K, Sundaramurthy V. 2020. The Interplay of Host Lysosomes and Intracellular Pathogens. . Front Cell Infect Microbiol.
Sadaf S, O Reddy V, Sane SP, Hasan G. 2015. Neural control of wing coordination in flies.. Curr Biol. 25(1):80-6.
Sadasivan K, Ramesh M.B, Palot MJafer, Ambekar M, Mirza Z.A. 2018. A new species of fan-throated lizard of the genus Sitana Cuvier, 1829 from coastal Kerala, southern India. ZOOTAXA. 4374(4):545-564.
Saha P, Nandi AK, Unnikrishnan S, Shilpa MC, Shukla SP, Mandal S, Mitra A, Gadagkar R. 2018. A Route to Direct Fitness: Natural and Experimentally Induced Queen Succession in the Tropical Primitively Eusocial Wasp Ropalidia marginata . JOURNAL OF INSECT BEHAVIOR . 31(1):54-65.
Saha S, Prakash V, Halder S, Chakraborty K, Krishnan Y. 2015. A pH-independent DNA nanodevice for quantifying chloride transport in organelles of living cells.. Nat Nanotechnol. 10(7):645-51.
Saha S, Lee I-H, Polley A, Groves JT, Rao M, Mayor S. 2015. Diffusion of GPI-anchored proteins is influenced by the activity of dynamic cortical actin.. Mol Biol Cell. 26(22):4033-45.
Saha S, Anilkumar AAmbika, Mayor S. 2016. GPI-anchored protein organization and dynamics at the cell surface.. J Lipid Res. 57(2):159-75.
Saha S, Raghupathy R, Mayor S. 2015. Homo-FRET imaging highlights the nanoscale organization of cell surface molecules.. Methods Mol Biol. 1251:151-73.
Salian SRaj, Pandya RKirit, Laxminarayana SLakshmi Ko, Krishnamurthy H, Cheredath A, Tholeti P, Uppangala S, Kalthur G, Majumdar S, Schlatt S et al.. 2020. Impact of Temperature and Time Interval Prior to Immature Testicular-Tissue Organotypic Culture on Cellular Niche.. Reprod Sci.
Saltzberg DJ, Viswanath S, Echeverria I, Chemmama IE, Webb B, Sali A. 2020. Using Integrative Modeling Platform to Compute, Validate, and Archive a Model of a Protein Complex Structure.. Protein Sci.
Samhita L, Raval PK, Stephenson G, Thutupalli S, Agashe D. 2021. The Impact of Mistranslation on Phenotypic Variability and Fitness.. Evolution.
Samhita L. 2021. The Boggarts of biology: how non-genetic changes influence the genotype.. Curr Genet. 67(1):65-77.
Samhita L, Raval PK, Agashe D. 2020. Global mistranslation increases cell survival under stress in Escherichia coli.. PLoS Genet. 16(3):e1008654.
Sanap RV, Joglekar A, Prajapati D, Caleb JTD. 2017. Two new species of Langelurillus Próchniewicz, 1994 from India (Araneae: Salticidae: Aelurillina). Zootaxa. 4318(1):135-146.
Sandhya S, Mudgal R, Kumar G, Sowdhamini R, Srinivasan N. 2016. Protein sequence design and its applications.. Curr Opin Struct Biol. 37:71-80.
Sane SP. 2020. Editorial overview: Insect-inspired engineering: mechanisms, processes and algorithms.. Curr Opin Insect Sci. 42:vi-viii.
Sane M, Miranda JJohn, Agashe D. 2018. Antagonistic pleiotropy for carbon use is rare in new mutations.. Evolution.
Sane SP. 2020. Enhancing insect flight research with a lab-on-cables.. Sci Robot. 5(45)
Sane SP. 2016. Neurobiology and biomechanics of flight in miniature insects.. Curr Opin Neurobiol. 41:158-166.
Sane SP, Ramaswamy SSubha, Raja SVarma. 2020. Insect architecture: structural diversity and behavioral principles.. Curr Opin Insect Sci.
Sane SP. 2017. Eppur si vola (and yet it flies).. J Exp Biol. 220(Pt 4):514-516.
Sanjenbam P, Buddidathi R, Venkatesan R, Shivaprasad PV, Agashe D. 2020. Phenotypic diversity of Methylobacterium associated with rice landraces in North-East India.. PLoS One. 15(2):e0228550.
Sankaran M, Staver C. 2019. Droughts and the ecological future of tropical savanna vegetation. JOURNAL OF ECOLOGY. 107(4):1531-1549.
Sant HH, Sane SP. 2018. The Mechanosensory-Motor Apparatus of Antennae in the Oleander hawk moth (Daphnis nerii, Lepidoptera).. J Comp Neurol.
Saravanan B, Soota D, Islam Z, Majumdar S, Mann R, Meel S, Farooq U, Walavalkar K, Gayen S, Singh AKumar et al.. 2020. Ligand dependent gene regulation by transient ERα clustered enhancers.. PLoS Genet. 16(1):e1008516.
Sarkar A, Mukundan N, Sowndarya S, Dubey VKumar, Babu R, Lakshmanan V, Rangiah K, Panicker MM, Palakodeti D, Subramanian SPeruvemba et al.. 2019. Serotonin is essential for eye regeneration in planaria Schmidtea mediterranea.. FEBS Lett.
Sarkar V, Mahapatra C, Mohapatra PP, Nair MV, Kunte K. 2021. Description of three new species of the genus Mata Distant, 1906 (Hemiptera: Cicadidae: Cicadinae: Oncotympanini) with notes on their natural history from Indian state of Meghalaya, India.. Zootaxa. 4908(1):zootaxa.4908.1.1.
Sarkar SS, Trivedi DV, Morck MM, Adhikari AS, Pasha SN, Ruppel KM, Spudich JA. 2020. The hypertrophic cardiomyopathy mutations R403Q and R663H increase the number of myosin heads available to interact with actin.. Sci Adv. 6(14):eaax0069.
Sarov M, Barz C, Jambor H, Hein MY, Schmied C, Suchold D, Stender B, Janosch S, Kj VVikas, Krishnan RT et al.. 2016. A genome-wide resource for the analysis of protein localisation in Drosophila.. Elife. 5
Sasidharan R, Venkatesan R. 2019. Seed Elaiosome Mediates Dispersal by Ants and Impacts Germination in Ricinus communis. FRONTIERS IN ECOLOGY AND EVOLUTION. 7
Sathe M, Muthukrishnan G, Rae J, Disanza A, Thattai M, Scita G, Parton RG, Mayor S. 2018. Small GTPases and BAR domain proteins regulate branched actin polymerisation for clathrin and dynamin-independent endocytosis.. Nat Commun. 9(1):1835.
Sathyanarayanan N, Cannone G, Gakhar L, Katagihallimath N, Sowdhamini R, Ramaswamy S, Vinothkumar KR. 2019. Molecular basis for metabolite channeling in a ring opening enzyme of the phenylacetate degradation pathway.. Nat Commun. 10(1):4127.
Savory FR, Ramakrishnan U. 2015. Cryptic diversity and habitat partitioning in an economically important aphid species complex.. Infect Genet Evol. 30:230-7.
Saxena K, Webster J, Hallas-Potts A, Mackenzie R, Spooner PA, Thomson D, Kind P, Chatterji S, Morris RGM. 2018. Experiential contributions to social dominance in a rat model of fragile-X syndrome.. Proc Biol Sci. 285(1880)
Saxena K, Chakraborty P, Chattarji S. 2020. The same stress has divergent effects on social versus asocial manifestations of anxiety-like behavior over time.. Stress. :1-21.
Saxena N, Natesan D, Sane SP. 2018. Odor source localization in complex visual environments by fruit flies.. J Exp Biol. 221(Pt 2)
Schulze A, Gomez-Marin A, Rajendran VG, Lott G, Musy M, Ahammad P, Deogade A, Sharpe J, Riedl J, Jarriault D et al.. 2015. Dynamical feature extraction at the sensory periphery guides chemotaxis.. Elife. 4
Schwarz O, Bohra AAsgar, Liu X, Reichert H, VijayRaghavan K, Pielage J. 2017. Motor control of Drosophila feeding behavior.. Elife. 6
Scolari VF, Lagomarsino MCosentino. 2015. Combined collapse by bridging and self-adhesion in a prototypical polymer model inspired by the bacterial nucleoid.. Soft Matter. 11(9):1677-87.
Seabloom EW, Borer ET, Buckley YM, Cleland EE, Davies KF, Firn J, W Harpole S, Hautier Y, Lind EM, MacDougall AS et al.. 2015. Plant species' origin predicts dominance and response to nutrient enrichment and herbivores in global grasslands.. Nat Commun. 6:7710.
Sellamuthu G, Jegadeeson V, Sajeevan RSivarajan, Rajakani R, Parthasarathy P, Raju K, Shabala L, Chen Z-H, Zhou M, Sowdhamini R et al.. 2020. Distinct Evolutionary Origins of Intron Retention Splicing Events in Antiporter Transcripts Relate to Sequence Specific Distinctions in Species.. Front Plant Sci. 11:267.
Sen S, Goluguri RReddy, Udgaonkar JB. 2017. A Dry Transition State More Compact Than the Native State Is Stabilized by Non-Native Interactions during the Unfolding of a Small Protein.. Biochemistry.
Sen S, VijayRaghavan K. 2019. Heinrich Reichert (1949-2019).. Development. 146(16)
Sen S, Udgaonkar JB. 2019. Binding-induced folding under unfolding conditions: Switching between induced fit and conformational selection mechanisms.. J Biol Chem. 294(45):16942-16952.
Sengupta T, Das R, Chattarji S. 2016. Chronic but not acute immobilization stress stably enhances hippocampal CA1 metabotropic glutamate receptor dependent Long-Term Depression.. Neurosci Lett. 633:101-105.
Sengupta I, Bhate SH, Das R, Udgaonkar JB. 2017. Salt-mediated oligomerization of the mouse prion protein monitored by real time NMR.. J Mol Biol.
Sengupta I, Udgaonkar J. 2019. Monitoring site-specific conformational changes in real-time reveals a misfolding mechanism of the prion protein.. Elife. 8
Sengupta I, Udgaonkar JB. 2018. Structural mechanisms of oligomer and amyloid fibril formation by the prion protein.. Chem Commun (Camb).
Sengupta I, Udgaonkar JB. 2017. Expression and purification of single cysteine-containing mutant variants of the mouse prion protein by oxidative refolding.. Protein Expr Purif.
Senthoorraja R, Subaharan K, Manjunath S, Pragadheesh VShanmugam, Bakthavatsalam N, Mohan MGounder, Senthil-Nathan S, Basavarajappa S. 2021. Electrophysiological, behavioural and biochemical effect of Ocimum basilicum oil and its constituents methyl chavicol and linalool on Musca domestica L.. Environ Sci Pollut Res Int.
Ser-Giacomi E, Zinger L, Malviya S, de Vargas C, Karsenti E, Bowler C, De Monte S. 2018. Ubiquitous abundance distribution of non-dominant plankton across the global ocean.. Nat Ecol Evol.
Seshasayee ASai Narain. 2018. Reply to Jobling, "Ectopic Expression of the and Genes of the Cryptic Prophage Rac of K-12 May Be Toxic but Do They Really Encode Toxins?: a Case for Using Genetic Context To Understand Function". mSphere. 3(2)
Setty TGangi, Sarkar A, Coombes D, Dobson RCJ, Subramanian R. 2020. Structure and Function of -Acetylmannosamine Kinases from Pathogenic Bacteria.. ACS Omega. 5(48):30923-30936.
Setua S, Enguita FJ, Chora ÂFerreira, Ranga-Prasad H, Lahree A, Marques S, Sundaramurthy V, Mota MM. 2020. Disrupting Plasmodium UIS3-host LC3 interaction with a small molecule causes parasite elimination from host cells.. Commun Biol. 3(1):688.
Sezgin E, Levental I, Mayor S, Eggeling C. 2017. The mystery of membrane organization: composition, regulation and roles of lipid rafts.. Nat Rev Mol Cell Biol.
K Shafi M, Joshi AG, Meenakshi I, Pasha SNaseer, Harini K, Mahita J, Sajeevan RSivarajan, Karpe SD, Ghosh P, Nitish S et al.. 2020. Dataset for the combined transcriptome assembly of and functional annotation.. Data Brief. 30:105416.
Shah A, Jain R, Brockmann A. 2018. : A Candidate Transcription Factor Involved in Molecular Processes Underlying Time-Memory.. Front Psychol. 9:865.
Shameer K, Tripathi LP, Kalari KR, Dudley JT, Sowdhamini R. 2016. Interpreting functional effects of coding variants: challenges in proteome-scale prediction, annotation and assessment.. Brief Bioinform. 17(5):841-62.
Shameer K, Naika MBN, K Shafi M, Sowdhamini R. 2019. Decoding systems biology of plant stress for sustainable agriculture development and optimized food production.. Prog Biophys Mol Biol. 145:19-39.
Sharda M, Badrinarayanan A, Seshasayee ASai Narain. 2020. Evolutionary and Comparative analysis of bacterial Non-Homologous End Joining Repair.. Genome Biol Evol.
Shariq M, Sahasrabuddhe V, Krishna S, Radha S, Bellampalli R, Dwivedi A, Cheramangalam R, Reizis B, Hébert J, Ghosh HS. 2021. Adult neural stem cells have latent inflammatory potential that is kept suppressed by to facilitate adult neurogenesis.. Sci Adv. 7(21)
Sharma Y, Saha S, Joseph A, Krishnan H, Raghu P. 2020. In vitro human stem cell derived cultures to monitor calcium signaling in neuronal development and function. Wellcome Open Res. 5:16.
Sharma S, Mathre S, Ramya V, Shinde D, Raghu P. 2019. Phosphatidylinositol 5 Phosphate 4-Kinase Regulates Plasma-Membrane PIP Turnover and Insulin Signaling.. Cell Rep. 27(7):1979-1990.e7.
Sharma A, Tiwari V, Sowdhamini R. 2020. Computational search for potential COVID-19 drugs from FDAapproved drugs and small molecules of natural origin identifies several anti-virals and plant products.. J Biosci. 45
Sharma SDas, Pal R, Reddy BKumar, Selvaraj BT, Raj N, Samaga KKumar, Srinivasan DJ, Ornelas L, Sareen D, Livesey MR et al.. 2020. Cortical neurons derived from human pluripotent stem cells lacking FMRP display altered spontaneous firing patterns.. Mol Autism. 11(1):52.
Sharma S, Zajac M, Krishnan Y. 2020. A DNA Aptamer for Cyclic Adenosine Monophosphate that Shows Adaptive Recognition.. Chembiochem. 21(1-2):157-162.
Sharma A, Hasan G. 2020. Modulation of flight and feeding behaviours requires presynaptic IPRs in dopaminergic neurons.. Elife. 9
Sharma A, Talimarada D, Yadav UPrasad, Singh N, A. Reddy S, Bag D, Biswas K, Baidya A, Borale AN, Shinde D et al.. 2020. Design and Synthesis of New Tubulin Polymerization Inhibitors Inspired from Combretastatin A-4: An Anticancer Agent. ChemistrySelect. 5(37):11560-11572.
Shettigar N, Joshi A, Dalmeida R, Gopalkrishna R, Chakravarthy A, Patnaik S, Mathew M, Palakodeti D, Gulyani A. 2017. Hierarchies in light sensing and dynamic interactions between ocular and extraocular sensory networks in a flatworm.. Sci Adv. 3(7):e1603025.
Shetty R, Joshi D, Jain M, Vasudevan M, Paul JChrysolite, Bhat G, Banerjee P, Abe T, Kiyonari H, VijayRaghavan K et al.. 2018. Rudhira/BCAS3 is essential for mouse development and cardiovascular patterning.. Sci Rep. 8(1):5632.
Shingate P, Warwicker J, Sowdhamini R. 2015. Energetic Calculations to Decipher pH-Dependent Oligomerization and Domain Swapping of Proteins.. PLoS One. 10(6):e0127716.
Shingate P, Upadhyay A, Khader S, Sowdhamini R. 2015. 172 Computational analysis and prediction of proteins that undergo domain swapping.. J Biomol Struct Dyn. 33 Suppl 1:112-3.
Shivaprasad PV, Hohn T, Akbergenov R. 2015. Biochemical requirements for two Dicer-like activities from wheat germ.. PLoS One. 10(1):e0116736.
Shivaprasad PV, Chen H-M, Patel K, Bond DM, Santos BACM, Baulcombe DC. 2019. CORRECTION: A MicroRNA Superfamily Regulates Nucleotide Binding Site-Leucine-Rich Repeats and Other mRNAs.. Plant Cell.
Shivaprasad PV. 2019. New clues into the mechanisms of rice domestication.. J Biosci. 44(2)
Shrivastava R, Köster D, Kalme S, Mayor S, Neerathilingam M. 2015. Tailor-made ezrin actin binding domain to probe its interaction with actin in-vitro.. PLoS One. 10(4):e0123428.
Shukla A, Bhattacharyya A, Kuppusamy L, Srivas M, Thattai M. 2017. Discovering vesicle traffic network constraints by model checking.. PLoS One. 12(7):e0180692.
Sil P, Mateos N, Nath S, Buschow S, Manzo C, Suzuki KGN, Fujiwara T, Kusumi A, Garcia-Parajo MF, Mayor S. 2020. Dynamic actin-mediated nano-scale clustering of CD44 regulates its meso-scale organization at the plasma membrane.. Mol Biol Cell. 31(7):561-579.
Silva AP, Mukherjee S, Ramakrishnan U, Fernandes C, Björklund M. 2020. Closely related species show species-specific environmental responses and different spatial conservation needs: Prionailurus cats in the Indian subcontinent.. Sci Rep. 10(1):18705.
Singh J, Udgaonkar JB. 2016. Unraveling the Molecular Mechanism of pH-Induced Misfolding and Oligomerization of the Prion Protein.. J Mol Biol. 428(6):1345-55.
Singh A, Krishna S. 2019. Immunomodulatory and Therapeutic Potential of Marine Flora Products in the Treatment of Cancer. Bioactive Natural Products for the Management of Cancer: from Bench to Bedside . :139-166.
Singh D, Bhalla USingh. 2018. Subunit exchange enhances information retention by CaMKII in dendritic spines.. Elife. 7
Singh AS, Shah A, Brockmann A. 2018. Honey bee foraging induces upregulation of early growth response protein 1, hormone receptor 38 and candidate downstream genes of the ecdysteroid signalling pathway.. Insect Mol Biol. 27(1):90-98.
Singh J, Udgaonkar JB. 2015. Molecular Mechanism of the Misfolding and Oligomerization of the Prion Protein: Current Understanding and Its Implications.. Biochemistry. 54(29):4431-42.
Singh P, Seshasayee ASai Narain. 2017. Nucleoid-Associated Proteins: Genome Level Occupancy and Expression Analysis.. Methods Mol Biol. 1624:85-97.
Singh A, Vashistha N, Heck J, Tang X, Wipf P, Brodsky JL, Hampton RY. 2020. Direct involvement of Hsp70 ATP hydrolysis in Ubr1-dependent quality control.. Mol Biol Cell. :mbcE20080541.
Singh P, Srivathsa A, Macdonald DW. 2020. Conservation status of the dhole Cuon alpinus in north-east India, with a focus on Dampa Tiger Reserve, Mizoram. ORYX. 54(6):873-877.
Singh P, Macdonald DW. 2017. Populations and activity patterns of clouded leopards and marbled cats in Dampa Tiger Reserve, India. JOURNAL OF MAMMALOGY. 98(5):1453-1462.
Singh A, Hulsmeier J, Kandi AReddy, Pothapragada SShruti, Hillebrand J, Petrauskas A, Agrawal K, Rt K, Thiagarajan D, Jayaprakashappa D et al.. 2021. Antagonistic roles for Ataxin-2 structured and disordered domains in RNP condensation.. Elife. 10
Singh J, Udgaonkar JB. 2016. The pathogenic mutation T182A converts the prion protein into a molten globule-like conformation whose misfolding to oligomers but not to fibrils is drastically accelerated.. Biochemistry. 55(3):459-69.
Singh J, Udgaonkar JB. 2015. Structural effects of multiple pathogenic mutations suggest a model for the initiation of misfolding of the prion protein.. Angew Chem Int Ed Engl. 54(26):7529-33.