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Aylward M, Sagar V, Natesh M, Ramakrishnan U.  2022.  How methodological changes have influenced our understanding of population structure in threatened species: insights from tiger populations across India.. Philos Trans R Soc Lond B Biol Sci. 377(1852):20200418.
Augustine DJ, Wigley BJ, Ratnam J, Kibet S, Nyangito M, Sankaran M.  2019.  Large herbivores maintain a two-phase herbaceous vegetation mosaic in a semi-arid savanna.. Ecol Evol. 9(22):12779-12788.
Attiwilli S, Ravikanthachari N, Kunte K.  2023.  A comparison between time-constrained counts and line transects as methods to estimate butterfly diversity and monitor populations in tropical habitats. INSECT CONSERVATION AND DIVERSITY.
Attiwilli S, Karmakar T, Isvaran K, Kunte K.  2021.  Habitat preference and functional traits influence responses of tropical butterflies to varied habitat disturbance. INTERNATIONAL JOURNAL OF TROPICAL INSECT SCIENCE.
Atreya KB, Saba JD.  2022.  Neurological Consequences of Sphingosine Phosphate Lyase Insufficiency.. Front Cell Neurosci. 16:938693.
Asopa A, Bhalla US.  2023.  A computational view of short-term plasticity and its implications for E-I balance.. Curr Opin Neurobiol. 81:102729.
Asokan MS, Joan RFlorina, Babji S, Dayma G, Nadukkandy P, Subrahmanyam V, Pandey A, Malagi G, Arya P, Mahajan V et al..  2024.  Immunogenicity of SARS-CoV-2 vaccines BBV152 (COVAXIN®) and ChAdOx1 nCoV-19 (COVISHIELD™) in seronegative and seropositive individuals in India: a multicentre, nonrandomised observational study.. Lancet Reg Health Southeast Asia. 22:100361.
Ashwini N, Sajeevan RSivarajan, Udayakumar M, Nataraja KN.  2018.  Identification of splice variant of in ssp. genotypes under salinity stress.. 3 Biotech. 8(8):345.
Ashok A, Naaz S, Kota LNarayanan, Sen S, Purushottam M, Faruq M, Kumari R, Yadav V, Kannan R, Jain S et al..  2019.  Does retinoic acid reverse cell cycle dysregulation in Alzheimer's disease lymphocytes? Asian J Psychiatr. 39:174-177.
Ashe S, Yadav S.  2019.  Maintenance of Rhodopsin levels in Drosophila photoreceptor and phototransduction requires Protein Kinase D.. Fly (Austin).
Ashe S, Malhotra V, Raghu P.  2018.  Protein kinase D regulates metabolism and growth by controlling secretion of insulin like peptide.. Dev Biol. 434(1):175-185.
Arya CKumar, Yadav S, Fine J, Casanal A, Chopra G, Ramanathan G, Vinothkumar KR, Subramanian R.  2020.  A 2-Tyr-1-carboxylate Mononuclear Iron Center Forms the Active Site of a Paracoccus Dimethylformamidase.. Angew Chem Int Ed Engl.
Arya D, Sachithanandan SP, Ross C, Palakodeti D, Li S, Krishna S.  2017.  MiRNA182 regulates percentage of myeloid and erythroid cells in chronic myeloid leukemia.. Cell Death Dis. 8(1):e2547.
Arvindekar S, Jackman MJ, Low JKK, Landsberg MJ, Mackay JP, Viswanath S.  2022.  Molecular architecture of nucleosome remodeling and deacetylase sub-complexes by integrative structure determination.. Protein Sci. 31(9):e4387.
Arvindekar S, Pathak AS, Majila K, Viswanath S.  2024.  Optimizing representations for integrative structural modeling using Bayesian model selection.. Bioinformatics. 40(3)
Arumugam S, Schmieder S, Pezeshkian W, Becken U, Wunder C, Chinnapen D, Ipsen JHjort, Kenworthy AK, Lencer W, Mayor S et al..  2021.  Ceramide structure dictates glycosphingolipid nanodomain assembly and function.. Nat Commun. 12(1):3675.
Arora R, Gupta K, Vijaykumar A, Krishna S.  2020.  DETECTing Merkel Cell Polyomavirus in Merkel Tumors.. Front Mol Biosci. 7:10.
Arora R, Vats A, Chimankar V.  2019.  MCV Truncated Large T antigen interacts with BRD4 in tumors. Matters.
Arora R, Rekhi B, Chandrani P, Krishna S, Dutt A.  2019.  Merkel cell polyomavirus is implicated in a subset of Merkel cell carcinomas, in the Indian subcontinent.. Microb Pathog. :103778.
Arora R, Choi JEun, Harms PW, Chandrani P.  2020.  Merkel Cell Polyomavirus in Merkel Cell Carcinoma: Integration Sites and Involvement of the KMT2D Tumor Suppressor Gene.. Viruses. 12(9)
Arolkar G, Kumar SKrishna, Wang H, Gonzalez KM, Kumar S, Bishnoi B, Coronado PERios, Y Woo J, Red-Horse K, Das S.  2023.  Dedifferentiation and Proliferation of Artery Endothelial Cells Drive Coronary Collateral Development in Mice.. Arterioscler Thromb Vasc Biol.
Arnold ML, Kunte K.  2017.  Adaptive Genetic Exchange: A Tangled History of Admixture and Evolutionary Innovation.. Trends Ecol Evol.
Arnillas CAlberto, Borer E, Seabloom E, Alberti J, Báez S, Bakker J, Boughton E, Buckley Y, Bugalho MNuno, Donohue I et al..  2021.  Opposing community assembly patterns for dominant and jonnondominant plant species in herbaceous ecosystems globally. ECOLOGY AND EVOLUTION .
Arnillas CAlberto, Borer ET, Seabloom EW, Alberti J, Báez S, Bakker JD, Boughton EH, Buckley YM, Bugalho MNuno, Donohue I et al..  2021.  Opposing community assembly patterns for dominant and nondominant plant species in herbaceous ecosystems globally.. Ecol Evol. 11(24):17744-17761.
Armstrong EE, Khan A, Taylor RW, Gouy A, Greenbaum G, Thiéry A, Kang JTL, Redondo SA, Prost S, Barsh G et al..  2021.  Recent evolutionary history of tigers highlights contrasting roles of genetic drift and selection.. Mol Biol Evol.
Anujan K, Ratnam J, Sankaran M.  2022.  Chronic browsing by an introduced mammalian herbivore in a tropical island alters species composition and functional traits of forest understory plant communities. BIOTROPICA .
Anstey NJ, Kapgal V., Tiwari S., Watson TC, Toft AKH, Dando OR, Inkpen FH, Baxter PS, Kozić Z, Jackson AD et al..  2022.  Imbalance of flight-freeze responses and their cellular correlates in the Nlgn3 -/y rat model of autism. Mol Autism.. 13(1):34.
Ansil BR, Mendenhall IH, Ramakrishnan U.  2021.  High prevalence and diversity of Bartonella in small mammals from the biodiverse Western Ghats.. PLoS Negl Trop Dis. 15(3):e0009178.
Ansil BR, George CElizabeth, Chandrasingh S, Viswanathan A, Thattai M, Raghu P, Devadiga S, Harikumar AGeetha, Harsha PKandi, Nair I et al..  2023.  Validating saliva as a biological sample for cost-effective, rapid and routine screening for SARS-CoV-2. INDIAN JOURNAL OF MEDICAL MICROBIOLOGY. 45(100384)
Anilkumar S, Patel D, de Boer SF, Chattarji S, Buwalda B.  2021.  Decreased dendritic spine density in posterodorsal medial amygdala neurons of proactive coping rats.. Behav Brain Res. 397:112940.
Anil S, Rawson D, Zhang T.  2018.  Development of molecular markers for zebrafish (Danio rerio) ovarian follicle growth assessment following in-vitro culture in cryopreservation studies.. Cryobiology. 83:75-83.
Anderson DM, Jayanthi LP, Gosavi S, Meiering EM.  2023.  Engineering the kinetic stability of a β-trefoil protein by tuning its topological complexity.. Front Mol Biosci. 10:1021733.
Ananthamurthy KG, Bhalla US.  2023.  Synthetic Data Resource and Benchmarks for Time Cell Analysis and Detection Algorithms.. eNeuro.
Anand K, Tripathi A, Shukla K, Malhotra N, Jamithireddy AKumar, Jha RKumar, Chaudhury SNarayan, Rajmani RS, Ramesh A, Nagaraja V et al..  2021.  Mycobacterium tuberculosis SufR responds to nitric oxide via its 4Fe-4S cluster and regulates Fe-S cluster biogenesis for persistence in mice.. Redox Biol. 46:102062.
Ammothumkandy A, Maliekal TThomas, Bose MVahanan, Rajkumar T, Shirley S, Thejaswini B, Giri VG, Krishna S.  2016.  CD66 and CD49f expressing cells are associated with distinct neoplastic phenotypes and progression in human cervical cancer.. Eur J Cancer. 60:166-178.
Ameta S, Matsubara YJ, Chakraborty N, Krishna S, Thutupalli S.  2021.  Self-Reproduction and Darwinian Evolution in Autocatalytic Chemical Reaction Systems.. Life (Basel). 11(4)
Ameta S, Kumar M, Chakraborty N, Matsubara YJ, S P, Gandavadi D, Thutupalli S.  2023.  Multispecies autocatalytic RNA reaction networks in coacervates.. Communications Chemistry. 6(1):91.
Ameta S, Arsène S, Foulon S, Saudemont B, Clifton BE, Griffiths AD, Nghe P.  2021.  Darwinian properties and their trade-offs in autocatalytic RNA reaction networks.. Nat Commun. 12(1):842.
Ambardar S., Vakhlu J, Sowdhamini R..  2022.  Insights from the analysis of draft genome sequence of Crocus sativus L. Bioinformation. 18(1):1-13.
Ambardar S, Bhagat N, Vakhlu J, Gowda M.  2021.  Diversity of Rhizo-Bacteriome of Crocus sativus Grown at Various Geographical Locations and Cataloging of Putative PGPRs. FRONTIERS IN SUSTAINABLE FOOD SYSTEMS. (644230)
Amarasinghe AAThasun, Ganesh S.R., Mirza ZA, Campbell PD, Pauwels OSG, Schweiger S, Kupfer A, Patel H, Karunarathna S, Deuti K et al..  2022.  The delusion of stripes: A century-old mystery of five-lined sun skinks (Reptilia: Scincidae: Eutropis) of Peninsular India elucidated. Zoologischer Anzeiger. 296:71-90.
Amarasinghe AAT, Karunarathna S, Campbell PD, Gayan AKA, Ranasinghe WDB, De Silva A, Mirza ZA.  2022.  The hidden diversity and inland radiation of Sri Lanka's ground-dwelling geckos of the genus Cyrtodactylus (Reptilia: Gekkonidae). SYSTEMATICS AND BIODIVERSITY . 20(1):1-25.
Amanullah A, Mishra R, Upadhyay A, Reddy PP, Das R, Mishra A.  2018.  Indomethacin elicits proteasomal dysfunctions develops apoptosis through mitochondrial abnormalities.. J Cell Physiol. 233(2):1685-1699.
Alves DA, George EA, Kaur R, Brockmann A, Hrncir M, Grüter C.  2023.  Diverse communication strategies in bees as a window into adaptations to an unpredictable world.. Proc Natl Acad Sci U S A. 120(24):e2219031120.
Aloysius A, DasGupta R, Dhawan J.  2018.  The transcription factor Lef1 switches partners from β-catenin to Smad3 during muscle stem cell quiescence.. Sci Signal. 11(540)
Ali F, Seshasayee A.  2020.  Dynamics of Genetic Variation in Transcription Factors and Its Implications for the Evolution of Regulatory Networks in Bacteria. Nucleic Acids Res. 48(8):4100-4114.
Alexandrov LB, Kim J, Haradhvala NJ, Huang MNi, Ng AWei Tian, Wu Y, Boot A, Covington KR, Gordenin DA, Bergstrom EN et al..  2020.  The repertoire of mutational signatures in human cancer. Nature. 578(7793):94-101.
Alcala N, Goldberg A, Ramakrishnan U, Rosenberg NA.  2019.  Coalescent theory of migration network motifs.. Mol Biol Evol.
Alam SSahajada M, Samanta A, Uddin F, Ali S, Hoque M.  2023.  Tanshinone IIA targeting cell signaling pathways: a plausible paradigm for cancer therapy.. Pharmacol Rep.
Akhtar BM, Bhatia P, Acharya S, Sharma S, Sharma Y, Aswathy BS, Ganapathy K, Vasudevan A, Raghu P.  2022.  A human stem cell resource to decipher the biochemical and cellular basis of neurodevelopmental defects in Lowe Syndrome.. Biol Open.
Ahmed A, Mam B, Sowdhamini R.  2021.  DEELIG: A Deep Learning Approach to Predict Protein-Ligand Binding Affinity.. Bioinform Biol Insights. 15:11779322211030364.
Ahmad M, Jha B, Bose S, Tiwari S, Dwivedy A, Kar D, Pal R, Mariadasse R, Parish T, Jeyakanthan J et al..  2023.  Structural snapshots of Mycobacterium tuberculosis enolase reveal dual mode of 2PG binding and its implication in enzyme catalysis.. IUCrJ. 10(Pt 6):738-753.
Agrawal T, Hasan G.  2015.  Maturation of a central brain flight circuit in Drosophila requires Fz2/Ca²⁺ signaling.. Elife. 4
Agrawal K, Prabhakar S, Bakthavachalu B, Chaturvedi D.  2024.  Distinct developmental patterns in Anopheles stephensi organ systems.. Dev Biol. 508:107-122.
Aghera NK, Prabha J, Tandon H, Chattopadhyay G, Vishwanath S, Srinivasan N, Varadarajan R.  2020.  Mechanism of CcdA-Mediated Rejuvenation of DNA Gyrase.. Structure. 28(5):562-572.e4.
Aghera N, Udgaonkar JB.  2017.  Stepwise Assembly of β-Sheet Structure during the Folding of an SH3 Domain Revealed by a Pulsed Hydrogen Exchange Mass Spectrometry Study.. Biochemistry.
Aggarwal A, Reichert H, VijayRaghavan K.  2019.  A locomotor assay reveals deficits in heterozygous Parkinson's disease model and proprioceptive mutants in adult .. Proc Natl Acad Sci U S A.
Agavekar G, Agashe D, Economo EP.  2019.  Dimensions of ant diversity on a small tropical island. INSECT CONSERVATION AND DIVERSITY. 12(2):161-171.
Agavekar G, Garcia FHita, Economo EP.  2017.  Taxonomic overview of the hyperdiverse ant genus Tetramorium Mayr (Hymenoptera, Formicidae) in India with descriptions and X-ray microtomography of two new species from the Andaman Islands.. PeerJ. 5:e3800.
Agashe D, Maheshwary S, Pattanaik JKumar, Prakash J, Bhatt P, Arya S.S, Chatterjee S, Kumar P, Singh P, Abbas N et al..  2022.  Career challenges for young independent researchers in India. CURRENT SCIENCE. 122(2):135-143.
Agashe D, Sane M, Phalnikar K, Diwan GD, Habibullah A, Martinez-Gomez NCecilia, Sahasrabuddhe V, Polachek W, Wang J, Chubiz LM et al..  2016.  Large-Effect Beneficial Synonymous Mutations Mediate Rapid and Parallel Adaptation in a Bacterium.. Mol Biol Evol.
Agashe D.  2017.  The road not taken: Could stress-specific mutations lead to different evolutionary paths? PLoS Biol. 15(6):e2002862.
Agashe D, Sane M, Singhal S.  2023.  Revisiting the Role of Genetic Variation in Adaptation. AMERICAN NATURALIST .
Agarwal A, Agashe D.  2020.  The red flour beetle Tribolium castaneum: A model for host-microbiome interactions.. PLoS One. 15(10):e0239051.
Agarwal I, Bauer AM, Giri VB, Khandekar A.  2019.  An expanded ND2 phylogeny of the brookii and prashadi groups with the description of three new Indian Hemidactylus Oken (Squamata: Gekkonidae).. Zootaxa. 4619(3):zootaxa.4619.3.2.
Agarwal I, Bauer AM, Pal S, Srikanthan AN, Khandekar A.  2020.  Two more new Hemiphyllodactylus Bleeker, 1860 (Squamata: Gekkonidae) from Tamil Nadu, India.. Zootaxa. 4729(2):zootaxa.4729.2.6.
Agarwal I, Ramakrishnan U.  2017.  A phylogeny of open-habitat lizards (Squamata: Lacertidae: Ophisops) supports the antiquity of Indian grassy biomes. JOURNAL OF BIOGEOGRAPHY . 44(9):2021-2032.
Agarwal I, Thackeray T, Khandekar A.  2020.  Geckos in the granite: two new geckos (Squamata: Gekkonidae) from rocky, scrub habitats in Rishi Valley, Andhra Pradesh, India. ZOOTAXA. 4838(4):451-474.
Agarwal I, Thackeray T, Khandekar A.  2021.  A new medium-sized rupicolous Cnemaspis Strauch, 1887 (Squamata: Gekkonidae) of the C. bangara clade from granite boulder habitats in Krishnagiri, Tamil Nadu, India.. Zootaxa. 4969(2):351366.
Agarwal I, Khandekar A, Ramakrishnan U, Vyas R, Giri VB.  2018.  Two new species of the Ophisops microlepis (Squamata: Lacertidae) complex from northwestern India with a key to Indian Ophisops . JOURNAL OF NATURAL HISTORY . 52(13-16):819-847.
Agarwal I, Thackeray T, Khandekar A.  2022.  A multitude of spots! Five new microendemic species of the Cnemaspis gracilis group (Squamata: Gekkonidae) from massifs in the Shevaroy landscape, Tamil Nadu, India. Vertebrate Zoology. 72:1137-1186.
Agarwal I, Mahony S, Giri VB, Chaitanya R, Bauer AM.  2018.  Two new species of bent toed geckos, Cyrtodactylus Gray, 1827 (Squamata: Gekkonidae) from Northeast India with comments on name-bearing types from the region . ZOOTAXA. 4420 (3):334-356.
Agarwal I, Bauer AM, Gamble T, Giri VB, Jablonski D, Khandekar A, Mohapatra PP, Masroor R, Mishra A, Ramakrishnan U.  2022.  The evolutionary history of an accidental model organism, the leopard gecko Eublepharis macularius (Squamata: Eublepharidae).. Mol Phylogenet Evol. :107414.
Agarwal I, Khandekar A, Giri VB, Ramakrishnan U, Karanth P.  2019.  The hills are alive with geckos! A radiation of a dozen species on sky islands across peninsular India (Squamata: Gekkonidae, Hemiphyllodactylus) with the description of three new species. Organisms Diversity & Evolution. 19(2):341–361.
Agarwal I, Thackeray T, Pal S, Khandekar A.  2020.  Granite boulders act as deep-time climate refugia: A Miocene divergent clade of rupicolous Cnemaspis Strauch, 1887 (Squamata: Gekkonidae) from the Mysore Plateau, India, with descriptions of three new species. JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH.
Agarwal I, Bauer AM, Khandekar A.  2020.  A new species of South Asian Cnemaspis (Squamata: Gekkonidae) from the Eastern Ghats, India. ZOOTAXA. 4802(3):449-462.
Agarwal I, Mirza ZA, Pal S, Maddock ST, Mishra A, Bauer AM.  2016.  A new species of the Cyrtodactylus (Geckoella) collegalensis (Beddome, 1870) complex (Squamata: Gekkonidae) from Western India.. Zootaxa. 4170(2):339-354.
Agarwal I, Thackeray T, Khandekar A.  2021.  Anew medium-sized rupicolous Cnemaspis Strauch, 1887 (Squamata: Gekkonidae) of the C. bangara clade from granite boulder habitats in Krishnagiri, Tamil Nadu, India. ZOOTAXA. 4969(4969):351-366.
Adurthi S, Kumar MM, Vinodkumar HS, Mukherjee G, Krishnamurthy H, K Acharya K, Bafna UD, Uma DK, Abhishekh B, Krishna S et al..  2017.  Oestrogen Receptor-α binds the FOXP3 promoter and modulates regulatory T-cell function in human cervical cancer.. Sci Rep. 7(1):17289.