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Yousuf M, Iuliani I, Veetil RT, Seshasayee ASai Narain, Sclavi B, Lagomarsino MCosentino.  2020.  Early fate of exogenous promoters in E. coli.. Nucleic Acids Res.
Yasmin F, Colangeli R, Morena M, Filipski S, van der Stelt M, Pittman QJ, Hillard CJ, G Teskey C, McEwen BS, Hill MN et al..  2020.  Stress-induced modulation of endocannabinoid signaling leads to delayed strengthening of synaptic connectivity in the amygdala.. Proc Natl Acad Sci U S A. 117(1):650-655.
Yasmin F, Saxena K, McEwen BS, Chattarji S.  2016.  The delayed strengthening of synaptic connectivity in the amygdala depends on NMDA receptor activation during acute stress.. Physiol Rep. 4(20)
Yapo C, Nair AG, Clement L, Castro LR, Kotaleski JHellgren, Vincent P.  2017.  Detection of phasic dopamine by D1 and D2 striatal medium spiny neurons.. J Physiol.
Yapo C, Nair AG, Kotaleski JHellgren, Vincent P, Castro LRV.  2018.  Switch-like PKA responses in the nucleus of striatal neurons.. J Cell Sci.
Yang L, Ravikanthachari N, Mariño-Pérez R, Deshmukh R, Wu M, Rosenstein A, Kunte K, Song H, Andolfatto P.  2019.  Predictability in the evolution of Orthopteran cardenolide insensitivity.. Philos Trans R Soc Lond B Biol Sci. 374(1777):20180246.
Yamamoto J, Adachi K, Bower JR, Matsui H, Nakaya M, Ohtani R, Puneeta P, Suzuki S, Tokioka S, Vijai D et al..  2019.  Close-up observations on the spawning behavior of a captive Japanese flying squid (Todarodes pacificus).. Sci Rep. 9(1):19739.
Yadav S, Thakur R, Georgiev P, Deivasigamani S, Krishnan H, Ratnaparkhi G, Raghu P.  2018.  RDGBα localization and function at membrane contact sites is regulated by FFAT-VAP interactions.. J Cell Sci. 131(1)
Yadav S, Rathod P, Alcoverro T, Arthur R.  2016.  Choice and destiny: the substrate composition and mechanical stability of settlement structures can mediate coral recruit fate in post-bleached reefs. Coral Reefs. 35(1):211-222.
Yadav S, Cockcroft S, Raghu P.  2016.  The Drosophila photoreceptor as a model system for studying signalling at membrane contact sites.. Biochem Soc Trans. 44(2):447-51.
Yadav S, Garner K, Georgiev P, Li M, Gomez-Espinosa E, Panda A, Mathre S, Okkenhaug H, Cockcroft S, Raghu P.  2015.  RDGBα, a PtdIns-PtdOH transfer protein, regulates G-protein-coupled PtdIns(4,5)P2 signalling during Drosophila phototransduction.. J Cell Sci. 128(17):3330-44.
Yadahalli S, Gosavi S.  2017.  Packing energetics determine the folding routes of the RNase-H proteins.. Phys Chem Chem Phys.
Yadahalli S, Gosavi S.  2016.  Functionally Relevant Specific Packing Can Determine Protein Folding Routes.. J Mol Biol. 428(2 Pt B):509-21.
Yadahalli S, Li J, Lane DP, Gosavi S, Verma CS.  2017.  Characterizing the conformational landscape of MDM2-binding p53 peptides using Molecular Dynamics simulations.. Sci Rep. 7(1):15600.
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Wyart C, Thirumalai V.  2019.  Building behaviors, one layer at a time.. Elife. 8
Wordley CFR, Sankaran M, Mudappa D, Altringham JD.  2018.  Heard but not seen: Comparing bat assemblages and study methods in a mosaic landscape in the Western Ghats of India.. Ecol Evol. 8(8):3883-3894.
Wordley CFR, Sankaran M, Mudappa D, Altringham JD.  2017.  Bats in the Ghats: Agricultural intensification reduces functional diversity and increases trait filtering in a biodiversity hotspot in India. Biological Conservation. 210:48-55.
Wordley CFR, Sankaran M, Mudappa D, Altringham JD.  2015.  Landscape scale habitat suitability modelling of bats in the Western Ghats of India: Bats like something in their tea. Biological Conservation. 191:529–536.
Winata CLanny, Kondrychyn I, Korzh V.  2015.  Changing Faces of Transcriptional Regulation Reflected by Zic3.. Curr Genomics. 16(2):117-27.
Willemen L, Barger NN, Brink Bten, Cantele M, Erasmus BFN, Fisher JL, Gardner T, Holland TG, Kohler F, Kotiaho JS et al..  2020.  How to halt the global decline of lands. NATURE SUSTAINABILITY.
Willaert B, Suyesh R, Garg S, Giri VB, Bee MA, Biju SD.  2016.  A unique mating strategy without physical contact during fertilization in Bombay Night Frogs (Nyctibatrachus humayuni) with the description of a new form of amplexus and female call.. PeerJ. 4:e2117.
Wigley BJ, Coetsee C, Kruger LM, Ratnam J, Sankaran M.  2019.  Ants, fire, and bark traits affect how African savanna trees recover following damage. BIOTROPICA.
Wigley BJ, Staver C, Zytkowiak R, Jagodzinski AM, Wigley-Coetsee C.  2019.  Root trait variation in African savannas. Plant and Soil. 441(1-2):555–565.
Wigley BJ, Augustine DJ, Coetsee C, Ratnam J, Sankaran M.  2020.  Grasses continue to trump trees at soil carbon sequestration following herbivore exclusion in a semi-arid African savanna.. Ecology. :e03008.
Wigley BJ, Fritz H, Coetsee C.  2018.  Defence strategies in African savanna trees.. Oecologia.
Wigley BJ, Slingsby JA, Diaz S, Bond WJ, Fritz H, Coetsee C.  2016.  Leaf traits of African woody savanna species across climate and soil fertility gradients: evidence for conservative versus acquisitive resource-use strategies. Journal of Ecology.
Wigley BJ, Coetsee C, Augustine DJ, Ratnam J, Hattas D, Sankaran M..  2019.  A thorny issue: Woody plant defence and growth in an East African savanna. JOURNAL OF ECOLOGY. 107(4):1839-1851.
Wickramasinghe N, Robin VV, Ramakrishnan U, Reddy S, Seneviratne SS.  2017.  Non-sister Sri Lankan white-eyes (genus Zosterops) are a result of independent colonizations.. PLoS One. 12(8):e0181441.
Weinert T, Olieric V, Waltersperger S, Panepucci E, Chen L, Zhang H, Zhou D, Rose J, Ebihara A, Kuramitsu S et al..  2015.  Fast native-SAD phasing for routine macromolecular structure determination.. Nat Methods. 12(2):131-3.
Wegener C, Hasan G.  2019.  ER-Ca2+ sensor STIM regulates neuropeptides required for development under nutrient restriction in Drosophila.. PLoS One. 14(7):e0219719.
Wang T, Goyal A, Dubinkina V, Maslov S.  2019.  Evidence for a multi-level trophic organization of the human gut microbiome.. PLoS Comput Biol. 15(12):e1007524.
Wang ET, J Taliaferro M, Lee J-A, Sudhakaran IP, Rossoll W, Gross C, Moss KR, Bassell GJ.  2016.  Dysregulation of mRNA Localization and Translation in Genetic Disease.. J Neurosci. 36(45):11418-11426.
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Viswanath B, Rao NP, Narayanaswamy JC, Sivakumar PT, Kandasamy A, Kesavan M, Mehta UMeherwan, Venkatasubramanian G, John JP, Mukherjee O et al..  2018.  Discovery biology of neuropsychiatric syndromes (DBNS): a center for integrating clinical medicine and basic science.. BMC Psychiatry. 18(1):106.
Viswanath B, Jose SP, Squassina A, Thirthalli J, Purushottam M, Mukherjee O, Vladimirov V, Patrinos GP, Del Zompo M, Jain S.  2015.  Cellular models to study bipolar disorder: A systematic review.. J Affect Disord. 184:36-50.
Viswan NA, HarshaRani GVani, Stefan MI, Bhalla US.  2018.  FindSim: A Framework for Integrating Neuronal Data and Signaling Models.. Front Neuroinform. 12:38.
Vishwanath S, Sukhwal A, Sowdhamini R, Srinivasan N.  2017.  Specificity and stability of transient protein-protein interactions.. Curr Opin Struct Biol. 44:77-86.
Vishen ASingh, Rupprecht J-F, Shivashankar GV, Prost J, Rao M.  2018.  Soft inclusion in a confined fluctuating active gel.. Phys Rev E. 97(3-1):032602.
Vishen ASingh, Prost J, Rao M.  2019.  Breakdown of effective temperature, power law interactions, and self-propulsion in a momentum-conserving active fluid.. Phys Rev E. 100(6-1):062602.
Vinekar RS, Sowdhamini R.  2016.  Three-dimensional modelling of the voltage-gated sodium ion channel from Anopheles gambiae reveals spatial clustering of evolutionarily conserved acidic residues at the extracellular sites.. Curr Neuropharmacol.
Vijayasarathy M, Balaram P.  2019.  Cone snail prolyl-4-hydroxylase α-subunit sequences derived from transcriptomic data and mass spectrometric analysis of variable proline hydroxylation in C. amadis venom.. J Proteomics. 194:37-48.
Vijayasarathy M, Basheer SM, Balaram P.  2018.  Cone Snail Glutaminyl Cyclase Sequences from Transcriptomic Analysis and Mass Spectrometric Characterization of Two Pyroglutamyl Conotoxins.. J Proteome Res. 17(8):2695-2703.
Vijayasarathy M, Balaram P.  2018.  Mass spectrometric identification of bromotryptophan containing conotoxin sequences from the venom of C. amadis.. Toxicon. 144:68-74.
Vijayakrishnan S, Kumar MAnanda, Umapathy G, Kumar V, Sinha A.  2018.  Physiological stress responses in wild Asian elephants Elephas maximus in a human-dominated landscape in the Western Ghats, southern India.. Gen Comp Endocrinol. 266:150-156.
Velho N, Srinivasan U, Singh P, Laurance WF.  2016.  Large mammal use of protected and community-managed lands in a biodiversity hotspot. ANIMAL CONSERVATION. 19(2):199-208.
Veldman JW, Aleman JC, Alvarado ST, T Anderson M, Archibald S, Bond WJ, Boutton TW, Buchmann N, Buisson E, Canadell JG et al..  2019.  Comment on "The global tree restoration potential".. Science. 366(6463)
Veetil RT, Malhotra N, Dubey A, Seshasayee ASai Narain.  2020.  Laboratory Evolution Experiments Help Identify a Predominant Region of Constitutive Stable DNA Replication Initiation.. mSphere. 5(1)
Varudkar A, Ramakrishnan U.  2018.  Gut microflora may facilitate adaptation to anthropic habitat: A comparative study in .. Ecol Evol. 8(13):6463-6472.
Varudkar A, Ramakrishnan U.  2015.  Commensalism facilitates gene flow in mountains: a comparison between two Rattus species.. Heredity (Edinb). 115(3):253-61.
Varma V, Catherin AM, Sankaran M.  2018.  Effects of increased N and P availability on biomass allocation and root carbohydrate reserves differ between N-fixing and non-N-fixing savanna tree seedlings.. Ecol Evol. 8(16):8467-8476.
Varma V., Ratnam J., Viswanathan V., Osuri A.M, Biesmeijer J.C, Madhusudan M.D, Sankaran M..  2015.  Perceptions of priority issues in the conservation of biodiversity and ecosystems in India. Biological Conservation . 187:201-211.
Varma V, Iyengar SB, Sankaran M.  2016.  Effects of nutrient addition and soil drainage on germination of N-fixing and non-N-fixing tropical dry forest tree species . Plant Ecology. 217(1043–1054):1043–1054.
Varahan S, Walvekar A, Sinha V, Krishna S, Laxman S.  2019.  Metabolic constraints drive self-organization of specialized cell groups.. Elife. 8
Vaishnav A, Shukla AK, Sharma A, Kumar R, Choudhary DK.  2019.  Endophytic Bacteria in Plant Salt Stress Tolerance: Current and Future Prospects. Journal of Plant Growth Regulation. 38(2):650–668.
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Trivedi DV, Nag S, Spudich A, Ruppel KM, Spudich JA.  2020.  The Myosin Family of Mechanoenzymes: From Mechanisms to Therapeutic Approaches.. Annu Rev Biochem.
Tripathi V, Chatterjee KSankar, Das R.  2019.  Casein kinase-2 mediated phosphorylation increases the SUMO-dependent activity of the cytomegalovirus transactivator IE2.. J Biol Chem.
Toussaint EFA, Morinière J, Müller CJ, Kunte K, Turlin B, Hausmann A, Balke M.  2015.  Comparative molecular species delimitation in the charismatic Nawab butterflies (Nymphalidae, Charaxinae, Polyura).. Mol Phylogenet Evol. 91:194-209.
Toniolo C, Crisma M, Formaggio F, Alemán C, Ramakrishnan C, Kalmankar N, Balaram P.  2017.  Intramolecular Backbone···Backbone Hydrogen Bonds in Polypeptide Conformations. The Other Way Around: ε-Turn.. Biopolymers. 108(1)
Tomar A, Polygalov D, Chattarji S, McHugh TJ.  2015.  The dynamic impact of repeated stress on the hippocampal spatial map.. Hippocampus. 25(1):38-50.
Tiwari V, Karpe SD, Sowdhamini R.  2019.  Topology prediction of insect olfactory receptors.. Curr Opin Struct Biol. 55:194-203.
Tiruvaimozhi YV, Sankaran M.  2019.  Soil respiration in a tropical montane grassland ecosystem is largely heterotroph-driven and increases under simulated warming. Agricultural and Forest Meteorology. 276-277
Tiruvaimozhi YV, Varma V, Sankaran M.  2018.  Nitrogen fixation ability explains leaf chemistry and arbuscular mycorrhizal responses to fertilization . PLANT ECOLOGY . 219(4):391-401.
Tirumalai V, Swetha C, Nair A, Pandit A, Shivaprasad PV.  2019.  miR828 and miR858 regulate VvMYB114 to promote anthocyanin and flavonol accumulation in grapes.. J Exp Bot.
Till SM, Asiminas A, Jackson AD, Katsanevaki D, Barnes SA, Osterweil EK, Bear MF, Chattarji S, Wood ER, Wyllie DJA et al..  2015.  Conserved hippocampal cellular pathophysiology but distinct behavioural deficits in a new rat model of FXS.. Hum Mol Genet. 24(21):5977-84.
Thutupalli S, Uppaluri S, Constable GWA, Levin SA, Stone HA, Tarnita CE, Brangwynne CP.  2017.  Farming and public goods production in Caenorhabditis elegans populations.. Proc Natl Acad Sci U S A. 114(9):2289-2294.
Thutupalli S, Geyer D, Singh R, Adhikari R, Stone HA.  2018.  Flow-induced phase separation of active particles is controlled by boundary conditions.. Proc Natl Acad Sci U S A.
Thottacherry JJose, Kosmalska AJoanna, Kumar A, Vishen ASingh, Elosegui-Artola A, Pradhan S, Sharma S, Singh PP, Guadamillas MC, Chaudhary N et al..  2018.  Mechanochemical feedback control of dynamin independent endocytosis modulates membrane tension in adherent cells.. Nat Commun. 9(1):4217.
Thottacherry JJose, Sathe M, Prabhakara C, Mayor S.  2019.  Spoiled for Choice: Diverse Endocytic Pathways Function at the Cell Surface.. Annu Rev Cell Dev Biol. 35:55-84.
Thorpe CJ, Lewis TR, Kulkarni S, Watve A, Gaitonde N, Pryce D, Davies L, Bilton DT, Knight ME.  2018.  Micro-habitat distribution drives patch quality for sub-tropical rocky plateau amphibians in the northern Western Ghats, India.. PLoS One. 13(3):e0194810.
Thomas P, Pranatharthi A, Ross C, Srivastava S.  2019.  RhoC: a fascinating journey from a cytoskeletal organizer to a Cancer stem cell therapeutic target.. J Exp Clin Cancer Res. 38(1):328.
Thillaiappan NBabu, Chakraborty P, Hasan G, Taylor CW.  2019.  IP3 receptors and Ca2+ entry. Biochim Biophys Acta Mol Cell Res. 1866(7):1092-1100.
Thatte P, Chandramouli A, Tyagi A, Patel K, Baro B, Chhattani H, Ramakrishnan U.  2019.  Human footprint differentially impacts genetic connectivity of four wide‐ranging mammals in a fragmented landscape. Diversity and Distribution.
Thatte P, Joshi A, Vaidyanathan S, Landguth E, Ramakrishnan U.  2018.  Maintaining tiger connectivity and minimizing extinction into the next century: Insights from landscape genetics and spatially-explicit simulations . BIOLOGICAL CONSERVATION . 218:181-191.
Thattai M.  2019.  How contraction has shaped evolution.. Elife. 8
Thattai M.  2016.  Universal Poisson Statistics of mRNAs with Complex Decay Pathways.. Biophys J. 110(2):301-5.
Thattai M.  2017.  Organelle acidification: an ancient cellular leak detector.. BMC Biol. 15(1):51.
Thakur R, Naik A, Panda A, Raghu P.  2019.  Regulation of Membrane Turnover by Phosphatidic Acid: Cellular Functions and Disease Implications.. Front Cell Dev Biol. 7:83.
Thakur R, Panda A, Coessens E, Raj N, Yadav S, Balakrishnan S, Zhang Q, Georgiev P, Basak B, Pasricha R et al..  2016.  Phospholipase D activity couples plasma membrane endocytosis with retromer dependent recycling.. Elife. 5
Taylor MJ, Husain K, Gartner ZJ, Mayor S, Vale RD.  2017.  A DNA-Based T Cell Receptor Reveals a Role for Receptor Clustering in Ligand Discrimination.. Cell. 169(1):108-119.e20.
Tamma K, Ramakrishnan U.  2015.  Higher speciation and lower extinction rates influence mammal diversity gradients in Asia.. BMC Evol Biol. 15:11.
Tait C, Batra S, Ramaswamy SSubha, Feder JL, Olsson SB.  2016.  Sensory specificity and speciation: a potential neuronal pathway for host fruit odour discrimination in Rhagoletis pomonella.. Proc Biol Sci. 283(1845)
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Syiem BLa Nam, Goswami VR, Vasudev D.  2018.  "In a tree by the brook, there's a songbird who sings": Woodlands in an agricultural matrix maintain functionality of a wintering bird community.. PLoS One. 13(8):e0201657.
Syed DSakeena, Gowda SBM, O Reddy V, Reichert H, VijayRaghavan K.  2016.  Glial and neuronal Semaphorin signaling instruct the development of a functional myotopic map for Drosophila walking.. Elife. 5
Syama A, Sen S, Kota LNarayanan, Viswanath B, Purushottam M, Varghese M, Jain S, Panicker MM, Mukherjee O.  2018.  Mutation burden profile in familial Alzheimer's disease cases from India.. Neurobiol Aging. 64:158.e7-158.e13.
Swetha C, Basu D, Pachamuthu K, Tirumalai V, Nair A, Prasad M, Shivaprasad PV.  2018.  Major domestication-related phenotypes in indica rice are due to loss of miRNA-mediated laccase silencing.. Plant Cell.
Swaminathan V, Kalappurakkal JMathew, Mehta SB, Nordenfelt P, Moore TI, Koga N, Baker DA, Oldenbourg R, Tani T, Mayor S et al..  2017.  Actin retrograde flow actively aligns and orients ligand-engaged integrins in focal adhesions.. Proc Natl Acad Sci U S A. 114(40):10648-10653.
Suryawanshi KR, Redpath SM, Bhatnagar YVeer, Ramakrishnan U, Chaturvedi V, Smout SC, Mishra C.  2017.  Impact of wild prey availability on livestock predation by snow leopards.. R Soc Open Sci. 4(6):170026.
Sure GReddy, Chatterjee A, Mishra N, Sabharwal V, Devireddy S, Awasthi A, Mohan S, Koushika SP.  2018.  UNC-16/JIP3 and UNC-76/FEZ1 limit the density of mitochondria in C. elegans neurons by maintaining the balance of anterograde and retrograde mitochondrial transport.. Sci Rep. 8(1):8938.
Suratekar R, Panda A, Padinjat R, Krishna S.  2018.  Evidence of sinks and sources in the phospholipase C activated PIP2 cycle.. FEBS Lett.
Surana S, Shenoy AR, Krishnan Y.  2015.  Designing DNA nanodevices for compatibility with the immune system of higher organisms.. Nat Nanotechnol. 10(9):741-7.
Surana P, Gowda CM, Tripathi V, Broday L, Das R.  2017.  Structural and functional analysis of SMO-1, the SUMO homolog in Caenorhabditis elegans.. PLoS One. 12(10):e0186622.
Surana P, Das R.  2016.  Observing a late folding intermediate of Ubiquitin at atomic resolution by NMR.. Protein Sci.
Sundaramurthy V, Korf H, Singla A, Scherr N, Nguyen L, Ferrari G, Landmann R, Huygen K, Pieters J.  2017.  Survival of Mycobacterium tuberculosis and Mycobacterium bovis BCG in lysosomes in vivo.. Microbes Infect. 19(11):515-526.
Sukhwal A, Sowdhamini R.  2015.  PPCheck: A Webserver for the Quantitative Analysis of Protein-Protein Interfaces and Prediction of Residue Hotspots.. Bioinform Biol Insights. 9:141-51.
Sujkowski A, Ramesh D, Brockmann A, Wessells R.  2017.  Octopamine Drives Endurance Exercise Adaptations in Drosophila.. Cell Rep. 21(7):1809-1823.

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