Author [ Title(Desc)] Type Year
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Marcel N, Sarin A.  2016.  Notch1 regulated autophagy controls survival and suppressor activity of activated murine T-regulatory cells.. Elife. 5
Naik S, MacFarlane M, Sarin A.  2015.  Notch4 Signaling Confers Susceptibility to TRAIL-Induced Apoptosis in Breast Cancer Cells.. J Cell Biochem. 116(7):1371-80.
Mohapatra PP, Khandekar A, Dutta SK, Mahapatra C, Agarwal I.  2020.  A novel, diminutive Hemiphyllodactylus Bleeker, 1860 (Squamata: Gekkonidae from a sacred grove in Odisha, eastern India. ZOOTAXA. 4852(4):485-499.
Booker SA, Kind PC.  2021.  Novel insights in plasticity and learning impairments in Fragile X Syndrome.. Brain Res Bull.
Ghosh A, Sharma S, Shinde D, Ramya V, Raghu P.  2019.  A novel mass assay to measure phosphatidylinositol-5-phosphate from cells and tissues.. Biosci Rep. 39(10)
Chahwala FD, Singh D, R Kumar V, Rathore S, Yadav BK, Singh B, Singh AK.  2020.  A novel monopartite begomovirus and satellites associated with yellow mosaic disease of Sida spp. in India.. Arch Virol.
Negi H, Reddy PPurushotha, Vengayil V, Patole C, Laxman S, Das R.  2020.  A novel polyubiquitin chain linkage formed by viral Ubiquitin is resistant to host deubiquitinating enzymes.. Biochem J. 477(12):2193-2219.
Mudgal R, Sandhya S, Kumar G, Sowdhamini R, Chandra NR, Srinivasan N.  2015.  NrichD database: sequence databases enriched with computationally designed protein-like sequences aid in remote homology detection.. Nucleic Acids Res. 43(Database issue):D300-5.
Ray S, Chintaluri C, Bhalla US, Wójcik DK.  2016.  NSDF: Neuroscience Simulation Data Format.. Neuroinformatics. 14(2):147-67.
Venkatasubramani JPriya, Subramanyam P, Pal R, Reddy BK, Srinivasan DJeyalakshm, Chattarji S, Iossifov I, Klann E, Bhattacharya A.  2020.  N-terminal variant Asp14Asn of the human p70 S6 Kinase 1 enhances translational signaling causing different effects in developing and mature neuronal cells.. Neurobiol Learn Mem. 171:107203.
Singh P, Seshasayee ASai Narain.  2017.  Nucleoid-Associated Proteins: Genome Level Occupancy and Expression Analysis.. Methods Mol Biol. 1624:85-97.
Varma V, Sankaran M.  2021.  Nutrient deposition enhances post-fire survival in non-N-fixing savanna tree seedlings. JOURNAL OF VEGETATION SCIENCE. 32(2):e13020.
Borer ET, Harpole WS, Adler PB, Arnillas CA, Bugalho MN, Cadotte MW, Caldeira MC, Campana S, Dickman CR, Dickson TL et al..  2020.  Nutrients cause grassland biomass to outpace herbivory.. Nat Commun. 11(1):6036.
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Bhatia S, Krishnamoorthy G, Dhar D, Udgaonkar JB.  2019.  Observation of Continuous Contraction and a Metastable Misfolded State during the Collapse and Folding of a Small Protein.. J Mol Biol.
Surana P, Das R.  2016.  Observing a late folding intermediate of Ubiquitin at atomic resolution by NMR.. Protein Sci.
Sujkowski A, Ramesh D, Brockmann A, Wessells R.  2017.  Octopamine Drives Endurance Exercise Adaptations in Drosophila.. Cell Rep. 21(7):1809-1823.
Saxena N, Natesan D, Sane SP.  2018.  Odor source localization in complex visual environments by fruit flies.. J Exp Biol. 221(Pt 2)
Adurthi S, Kumar MM, Vinodkumar HS, Mukherjee G, Krishnamurthy H, K Acharya K, Bafna UD, Uma DK, Abhishekh B, Krishna S et al..  2017.  Oestrogen Receptor-α binds the FOXP3 promoter and modulates regulatory T-cell function in human cervical cancer.. Sci Rep. 7(1):17289.
Gupta P, Bhalla US.  2016.  Olfaction: Minority odors get equal say.. Elife. 5
Gupta P, Albeanu DF, Bhalla US.  2015.  Olfactory bulb coding of odors, mixtures and sniffs is a linear sum of odor time profiles.. Nat Neurosci. 18(2):272-81.
Parchure A, Vyas N, Ferguson C, Parton RG, Mayor S.  2015.  Oligomerization and endocytosis of Hedgehog is necessary for its efficient exovesicular secretion.. Mol Biol Cell. 26(25):4700-17.
Joshi S, Agashe D.  2020.  Ontogenic colour change, survival, and mating in the damselfly Agriocnemis pygmaea Rambur (Insecta: Odonata). ECOLOGICAL ENTOMOLOGY.
Bawa KS, Nawn N, Chellam R, Krishnaswamy J, Mathur V, Olsson SB, Pandit N, Rajagopal P, Sankaran M, R Shaanker U et al..  2020.  Opinion: Envisioning a biodiversity science for sustaining human well-being.. Proc Natl Acad Sci U S A.
Srivathsa A, Majgaonkar I, Sharma S, Singh P, Punjabi GA, Chawla MM, Banerjee A.  2020.  Opportunities for prioritizing and expanding conservation enterprise in India using a guild of carnivores as flagships. ENVIRONMENTAL RESEARCH LETTERS. 15(6)
Nair J, Sanmugam PV, Karpe SD, Ramakrishnan U, Olsson SB.  2018.  An optimized protocol for large-scale in situ sampling and analysis of volatile organic compounds. Ecology and Evolution. 8(11):59242-5935.
Nair J, Pragadheesh VS, Karpe SD, Ramakrishnan U, Olsson SB.  2018.  An optimized protocol for large‐scale in situ sampling and analysis of volatile organic compounds . Ecology and Evolution. 8(11):5924-5936.
Cherian P, Krishna S, Menon GI.  2021.  Optimizing testing for COVID-19 in India.. PLoS Comput Biol. 17(7):e1009126.
Thattai M.  2017.  Organelle acidification: an ancient cellular leak detector.. BMC Biol. 15(1):51.
Ramakrishnan N, Ipsen JH, Rao M, Kumar PBSunil.  2015.  Organelle morphogenesis by active membrane remodeling.. Soft Matter. 11(12):2387-93.
Reynolds AM, Reynolds DR, Sane SP, Hu G, Chapman JW.  2016.  Orientation in high-flying migrant insects in relation to flows: mechanisms and strategies.. Philos Trans R Soc Lond B Biol Sci. 371(1704)
Jethva PN, Udgaonkar JB.  2018.  The Osmolyte TMAO Modulates Protein Folding Cooperativity by Altering Global Protein Stability.. Biochemistry.
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Yadahalli S, Gosavi S.  2017.  Packing energetics determine the folding routes of the RNase-H proteins.. Phys Chem Chem Phys.
Pincha N, Hajam EYousaf, Badarinath K, Batta SPrakash Ra, Masudi T, Dey R, Andreasen P, Kawakami T, Samuel R, George R et al..  2018.  PAI1 mediates fibroblast-mast cell interactions in skin fibrosis.. J Clin Invest.
Consortium ICGC/TCGAPan-Cancer, Sabarinathan R, al et.  2020.  Pan-cancer Analysis of Whole Genomes. Nature. 578(7793):82-93.
Moulick R, Das R, Udgaonkar JB.  2015.  Partially Unfolded Forms of the Prion Protein Populated under Misfolding-promoting Conditions: CHARACTERIZATION BY HYDROGEN EXCHANGE MASS SPECTROMETRY AND NMR.. J Biol Chem. 290(42):25227-40.
Gandhimathi A, Ghosh P, Hariharaputran S, Mathew OK, Sowdhamini R.  2016.  PASS2 database for the structure-based sequence alignment of distantly related SCOP domain superfamilies: update to version 5 and added features.. Nucleic Acids Res. 44(D1):D410-4.
Ghosh P, Bhattacharyya T, Mathew OK, Sowdhamini R.  2019.  PASS2 version 6: a database of structure-based sequence alignments of protein domain superfamilies in accordance with SCOPe.. Database (Oxford). 2019
Khan I, Prakash A, Agashe D.  2019.  Pathogen susceptibility and fitness costs explain variation in immune priming across natural populations of flour beetles.. J Anim Ecol.
Sabareesan AThody, Singh J, Roy S, Udgaonkar JB, Mathew MK.  2016.  The Pathogenic A116V Mutation Enhances Ion-Selective Channel Formation by Prion Protein in Membranes.. Biophys J. 110(8):1766-76.
Singh J, Udgaonkar JB.  2016.  The pathogenic mutation T182A converts the prion protein into a molten globule-like conformation whose misfolding to oligomers but not to fibrils is drastically accelerated.. Biochemistry. 55(3):459-69.
Sabareesan AT, Udgaonkar JB.  2016.  Pathogenic mutations within the disordered palindromic region of the prion protein induce structure therein and accelerate the formation of misfolded oligomers.. J Mol Biol.
Mayor S, Pagano RE.  2007.  Pathways of clathrin-independent endocytosis.. Nat Rev Mol Cell Biol. 8(8):603-12.
Bhatia A, Moza S, Bhalla US.  2021.  Patterned Optogenetic Stimulation Using a DMD Projector.. Channelrhodopsin. 2191:173-188.
Varma V., Ratnam J., Viswanathan V., Osuri A.M, Biesmeijer J.C, Madhusudan M.D, Sankaran M..  2015.  Perceptions of priority issues in the conservation of biodiversity and ecosystems in India. Biological Conservation . 187:201-211.
Ghosh E, Varshney R, Venkatesan R.  2021.  Performance of larval parasitoid, Bracon brevicornis on two Spodoptera hosts: implication in bio-control of Spodoptera frugiperda. JOURNAL OF PEST SCIENCE.
Murata S, Brockmann A, Tanimura T.  2017.  Pharyngeal stimulation with sugar triggers local searching behavior in Drosophila.. J Exp Biol.
Das A, Polley A, Rao M.  2016.  Phase Segregation of Passive Advective Particles in an Active Medium.. Phys Rev Lett. 116(6):068306.
Bangal P, Sridhar H, Shanker K.  2021.  Phenotypic Clumping Decreases With Flock Richness in Mixed-Species Bird Flocks. FRONTIERS IN ECOLOGY AND EVOLUTION. (537816)
Sanjenbam P, Buddidathi R, Venkatesan R, Shivaprasad PV, Agashe D.  2020.  Phenotypic diversity of Methylobacterium associated with rice landraces in North-East India.. PLoS One. 15(2):e0228550.
Saha S, Prakash V, Halder S, Chakraborty K, Krishnan Y.  2015.  A pH-independent DNA nanodevice for quantifying chloride transport in organelles of living cells.. Nat Nanotechnol. 10(7):645-51.
Sharma S, Mathre S, Ramya V, Shinde D, Raghu P.  2019.  Phosphatidylinositol 5 Phosphate 4-Kinase Regulates Plasma-Membrane PIP Turnover and Insulin Signaling.. Cell Rep. 27(7):1979-1990.e7.
Kamalesh K, Trivedi D, Toscano S, Sharma S, Kolay S, Raghu P.  2017.  Phosphatidylinositol 5-phosphate 4-kinase regulates early endosomal dynamics during clathrin-mediated endocytosis.. J Cell Sci.
Balakrishnan SS, Basu U, Raghu P.  2015.  Phosphoinositide signalling in Drosophila.. Biochim Biophys Acta. 1851(6):770-84.
Padinjat R, Joseph A, Krishnan H, Singh P, Saha S.  2019.  Phosphoinositides: Regulators of Nervous System Function in Health and Disease. FRONTIERS IN MOLECULAR NEUROSCIENCE. 12
Thakur R, Panda A, Coessens E, Raj N, Yadav S, Balakrishnan S, Zhang Q, Georgiev P, Basak B, Pasricha R et al..  2016.  Phospholipase D activity couples plasma membrane endocytosis with retromer dependent recycling.. Elife. 5
Cockcroft S, Raghu P.  2018.  Phospholipid transport protein function at organelle contact sites.. Curr Opin Cell Biol. 53:52-60.
Kim S, Kalappurakkal JM, Mayor S, Rosen MK.  2019.  Phosphorylation of Nephrin induces phase separated domains that move through actomyosin contraction.. Mol Biol Cell. :mbcE18120823.
Nagpal S, Nair DT.  2021.  The PHP domain of PolX from Staphylococcus aureus aids high fidelity DNA synthesis through the removal of misincorporated deoxyribo-, ribo- and oxidized nucleotides.. Sci Rep. 11(1):4178.
Maddison WP, Beattie I, Marathe K, Ng PYC, Kanesharatnam N, Benjamin SP, Kunte K.  2020.  A phylogenetic and taxonomic review of baviine jumping spiders (Araneae, Salticidae, Baviini).. Zookeys. 1004:27-97.
Hime PM, Lemmon AR, Lemmon ECMoriarty, Prendini E, Brown JM, Thomson RC, Kratovil JD, Noonan BP, R Pyron A, Peloso PLV et al..  2021.  Phylogenomics Reveals Ancient Gene Tree Discordance in the Amphibian Tree of Life.. Syst Biol. 70(1):49-66.
Lajmi A, Bansal R, Giri VB, Karanth P.  2019.   Phylogeny and biogeography of the endemic Hemidactylus geckos of the Indian subregion suggest multiple dispersals from Peninsular India to Sri Lanka. Zoological Journal of the Linnean Society. 186(186):286–301.
Agarwal I, Ramakrishnan U.  2017.  A phylogeny of open-habitat lizards (Squamata: Lacertidae: Ophisops) supports the antiquity of Indian grassy biomes. JOURNAL OF BIOGEOGRAPHY . 44(9):2021-2032.
Yang X, Heinemann M, Howard J, Huber G, Iyer-Biswas S, Le Treut G, Lynch M, Montooth KL, Needleman DJ, Pigolotti S et al..  2021.  Physical bioenergetics: Energy fluxes, budgets, and constraints in cells.. Proc Natl Acad Sci U S A. 118(26)
Kosmalska AJoanna, Casares L, Elosegui-Artola A, Thottacherry JJose, Moreno-Vicente R, González-Tarragó V, del Pozo MÁngel, Mayor S, Arroyo M, Navajas D et al..  2015.  Physical principles of membrane remodelling during cell mechanoadaptation.. Nat Commun. 6:7292.
Vijayakrishnan S, Kumar MAnanda, Umapathy G, Kumar V, Sinha A.  2018.  Physiological stress responses in wild Asian elephants Elephas maximus in a human-dominated landscape in the Western Ghats, southern India.. Gen Comp Endocrinol. 266:150-156.
Dwivedi D, Bhalla US.  2021.  Physiology and Therapeutic Potential of SK, H, and M Medium AfterHyperPolarization Ion Channels.. Front Mol Neurosci. 14:658435.
Basu U, Balakrishnan SS, Janardan V, Raghu P.  2020.  A PI4KIIIα protein complex is required for cell viability during Drosophila wing development.. Dev Biol. 462(2):208-222.
Mathew OKaleeckal, Sowdhamini R.  2016.  PIMA: Protein-Protein interactions in Macromolecular Assembly - a web server for its Analysis and Visualization.. Bioinformation. 12(1):9-11.
Mathew OK, Sowdhamini R.  2016.  PIMADb: A Database of Protein-Protein Interactions in Huge Macromolecular Assemblies.. Bioinform Biol Insights. 10:105-9.
R Kumar V.  2019.  Plant Antiviral Immunity Against Geminiviruses and Viral Counter-Defense for Survival.. Front Microbiol. 10:1460.
Seabloom EW, Borer ET, Buckley YM, Cleland EE, Davies KF, Firn J, W Harpole S, Hautier Y, Lind EM, MacDougall AS et al..  2015.  Plant species' origin predicts dominance and response to nutrient enrichment and herbivores in global grasslands.. Nat Commun. 6:7710.
Ghosh E, Venkatesan R.  2019.  Plant Volatiles Modulate Immune Responses of Spodoptera litura.. J Chem Ecol.
R Kumar V, Shivaprasad PV.  2020.  Plant-virus-insect tritrophic interactions: insights into the functions of geminivirus virion-sense strand genes.. Proc Biol Sci. 287(1936):20201846.
Subramani PA, Vartak-Sharma N, Sreekumar S, Mathur P, Nayer B, Dakhore S, Basavanna SK, Kalappa DM, Krishnamurthy RV, Mukhi B et al..  2020.  Plasmodium vivax liver stage assay platforms using Indian clinical isolates.. Malar J. 19(1):214.
Jain D, Narayanan N, Nair DT.  2016.  Plasticity in Repressor-DNA Interactions Neutralizes Loss of Symmetry in Bipartite Operators.. J Biol Chem. 291(3):1235-42.
Chandrasegaran K, Singh A, Laha M, Quader S.  2018.  Playing it safe? Behavioural responses of mosquito larvae encountering a fish predator ETHOLOGY ECOLOGY & EVOLUTION. 30(1):70-87.
Nabais C, Pessoa D, de-Carvalho J, van Zanten T, Duarte P, Mayor S, Carneiro J, Telley IA, Bettencourt-Dias M.  2021.  Plk4 triggers autonomous de novo centriole biogenesis and maturation.. J Cell Biol. 220(5)
Gopurappilly R.  2021.  Pluripotent Stem Cell Derived Neurons as In Vitro Models for Studying Autosomal Recessive Parkinson's Disease (ARPD): PLA2G6 and Other Gene Loci.. Adv Exp Med Biol.
Johnson MK, Kottur J, Nair DT.  2019.  A polar filter in DNA polymerases prevents ribonucleotide incorporation.. Nucleic Acids Res.
Gopalkrishnan M, Krishna S.  2020.  Pooling Samples to Increase SARS-CoV-2 Testing.. J Indian Inst Sci. :1-6.
Singh P, Macdonald DW.  2017.  Populations and activity patterns of clouded leopards and marbled cats in Dampa Tiger Reserve, India. JOURNAL OF MAMMALOGY. 98(5):1453-1462.
Sukhwal A, Sowdhamini R.  2015.  PPCheck: A Webserver for the Quantitative Analysis of Protein-Protein Interfaces and Prediction of Residue Hotspots.. Bioinform Biol Insights. 9:141-51.
Bhatia A, Moza S, Bhalla USingh.  2019.  Precise excitation-inhibition balance controls gain and timing in the hippocampus.. Elife. 8
Yang L, Ravikanthachari N, Mariño-Pérez R, Deshmukh R, Wu M, Rosenstein A, Kunte K, Song H, Andolfatto P.  2019.  Predictability in the evolution of Orthopteran cardenolide insensitivity.. Philos Trans R Soc Lond B Biol Sci. 374(1777):20180246.
Macdonald DW, Chiaverini L, Bothwell HM, Kaszta Ż, Ash E, Bolongon G, Can ÖEmre, Campos-Arceiz A, Channa P, Clements GReuben et al..  2020.  Predicting biodiversity richness in rapidly changing landscapes: climate, low human pressure or protection as salvation?
Su S, Lim M, Kunte K.  2015.  Prey from the eyes of predators: Color discriminability of aposematic and mimetic butterflies from an avian visual perspective.. Evolution. 69(11):2985-94.
Das T, Ganguly S, Sengupta S, Rao M.  2015.  Pre-yield non-affine fluctuations and a hidden critical point in strained crystals.. Sci Rep. 5:10644.
Venugopal N, Ghosh A, Gala H, Aloysius A, Vyas N, Dhawan J.  2020.  The primary cilium dampens proliferative signaling and represses a G2/M transcriptional network in quiescent myoblasts.. BMC Mol Cell Biol. 21(1):25.
Mahita J, Sowdhamini R.  2018.  Probing subtle conformational changes induced by phosphorylation and point mutations in the TIR domains of TLR2 and TLR3.. Proteins.
Biswas A, Thattai M.  2020.  Promiscuity and specificity of eukaryotic glycosyltransferases.. Biochem Soc Trans.
Patankar V, Wagh T, Marathe A.  2020.  Protected areas and benthic characteristics influence the distribution of the Vulnerable bumphead parrotfishBolbometopon muricatumin the Andaman and Nicobar Islands, India. ORYX. 54(4):564-571.
Ghosh-Harihar M, An R, Athrey R, Borthakur U, Chanchani P, Chetry D, Datta A, Harihar A, Karanth KK, Mariyam D et al..  2019.  Protected areas and biodiversity conservation in India. BIOLOGICAL CONSERVATION. 237:114-124.
Mascarenhas NManuel, Gosavi S.  2016.  Protein Domain-Swapping Can Be a Consequence of Functional Residues.. J Phys Chem B. 120(28):6929-38.
Neelamraju S, Wales DJ, Gosavi S.  2020.  Protein energy landscape exploration with structure-based models.. Curr Opin Struct Biol. 64:145-151.
Ashe S, Malhotra V, Raghu P.  2018.  Protein kinase D regulates metabolism and growth by controlling secretion of insulin like peptide.. Dev Biol. 434(1):175-185.
Sandhya S, Mudgal R, Kumar G, Sowdhamini R, Srinivasan N.  2016.  Protein sequence design and its applications.. Curr Opin Struct Biol. 37:71-80.
Broom A, Gosavi S, Meiering EM.  2015.  Protein unfolding rates correlate as strongly as folding rates with native structure.. Protein Sci. 24(4):580-7.
Nilofer C, Sukhwal A, Mohanapriya A, Kangueane P.  2017.  Protein-protein interfaces are vdW dominant with selective H-bonds and (or) electrostatics towards broad functional specificity.. Bioinformation. 13(6):164-173.
Richhariya S, Jayakumar S, Abruzzi K, Rosbash M, Hasan G.  2017.  A pupal transcriptomic screen identifies Ral as a target of store-operated calcium entry in Drosophila neurons.. Sci Rep. 7:42586.
Dhanya SK, Hasan G.  2021.  Purkinje neurons with loss of STIM1 exhibit age-dependent changes in gene expression and synaptic components. J Neurosci..

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