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Author Title [ Type(Asc)] Year
Journal Article
Gowda SBM, Paranjpe PD, O Reddy V, Thiagarajan D, Palliyil S, Reichert H, VijayRaghavan K.  2018.  GABAergic inhibition of leg motoneurons is required for normal walking behavior in freely moving.. Proc Natl Acad Sci U S A.
Sabareesan AThody, Udgaonkar JB.  2017.  The G126V Mutation in the Mouse Prion Protein Hinders Nucleation-Dependent Fibril Formation by Slowing Initial Fibril Growth and by Increasing the Critical Concentration.. Biochemistry. 56(44):5931-5942.
Yadahalli S, Gosavi S.  2016.  Functionally Relevant Specific Packing Can Determine Protein Folding Routes.. J Mol Biol. 428(2 Pt B):509-21.
Ratnam J, Chengappa SK, Machado S, Nataraj N, Osuri AM, Sankaran M.  2019.  Functional Traits of Trees From Dry Deciduous “Forests” of Southern India Suggest Seasonal Drought and Fire Are Important Drivers. Front. Ecol. Evol..
G KP, Kuruvilla S, Mathew MK.  2015.  Functional characterization of a transition metal ion transporter, OsZIP6 from rice (Oryza sativa L.).. Plant Physiol Biochem. 97:165-74.
Mathre S, Reddy B, Ramya V, Krishnan H, Ghosh A, Raghu P.  2019.  Functional analysis of the biochemical activity of mammalian phosphatidylinositol 5 phosphate 4-kinase enzymes.. Biosci Rep.
Panda A, Thakur R, Krishnan H, Naik A, Shinde D, Raghu P.  2018.  Functional analysis of mammalian phospholipase D enzymes.. Biosci Rep.
Batra S, Corcoran J, Zhang DD, Pal P, Umesh KP, Kulkarni R, Lofstedt C, Sowdhamini R, Olsson SB.  2019.  A Functional Agonist of Insect Olfactory Receptors: Behavior, Physiology and Structure. FRONTIERS IN CELLULAR NEUROSCIENCE. 13
Diwan GD, Agashe D.  2016.  The Frequency of Internal Shine-Dalgarno-like Motifs in Prokaryotes.. Genome Biol Evol. 8(6):1722-33.
Milán-Garcés EA, Thaore P, Udgaonkar JB, Puranik M.  2015.  Formation of a CH-π contact in the core of native barstar during folding.. J Phys Chem B. 119(7):2928-32.
Joshi AA, Sankaran M, Ratnam J.  2018.  ‘Foresting’ the grassland: Historical management legacies in forest-grassland mosaics in southern India, and lessons for the conservation of tropical grassy biomes. Biological Conservation. 224:144-152.
Zambre AM, Arthur R.  2018.  Foraging plasticity in obligate corallivorous Melon butterflyfish across three recently bleached reefs . ETHOLOGY. 124 (5):302-310.
Patankar V, D'Souza E, Alcoverro T, Arthur R.  2016.   For traditional island communities in the Nicobar archipelago, complete no-go areas are the most effective form of marine management . OCEAN & COASTAL MANAGEMENT . 133:53-63.
Rao VVHemanth, Gosavi S.  2018.  On the folding of a structurally complex protein to its metastable active state.. Proc Natl Acad Sci U S A.
D'Souza MNinochka, Gowda NKumar Chan, Tiwari V, Babu ROttakandat, Anand P, Dastidar SGhosh, Singh R, Selvaraja B, Pal R, Ramesh A et al..  2018.  FMRP Interacts with C/D Box snoRNA in the Nucleus and Regulates Ribosomal RNA Methylation.. iScience. 9:399-411.
Ravi P, Trivedi D, Hasan G.  2018.  FMRFa receptor stimulated Ca2+ signals alter the activity of flight modulating central dopaminergic neurons in Drosophila melanogaster.. PLoS Genet. 14(8):e1007459.
Roy S, Mathew MK.  2018.  Fluid flow modulates electrical activity in cardiac hERG potassium channels.. J Biol Chem.
Thutupalli S, Geyer D, Singh R, Adhikari R, Stone HA.  2018.  Flow-induced phase separation of active particles is controlled by boundary conditions.. Proc Natl Acad Sci U S A.
Jain A., Kunte K, Webb E.L..  2016.  Flower specialization of butterflies and impacts of non-native flower use in a transformed tropical landscape. Biological Conservation. 201:84–191.
Nandwani N, Surana P, Negi H, Mascarenhas NM, Udgaonkar JB, Das R, Gosavi S.  2019.  A five-residue motif for the design of domain swapping in proteins.. Nat Commun. 10(1):452.
Jumani S, Rao S, Kelkar N.  2018.  Fish community responses to stream flow alterations and habitat modifications by small hydropower projects in the Western Ghats biodiversity hotspot, India. Aquatic Conservation: Marine and Freshwater Ecosystems. 28(4):9792-993.
Deshpande K., Gangal M, Kelkar N.  2016.  First record of a bat from the Lakshadweep archipelago, southwestern India. Mammalia. 80(2):223-225.
Caleb JTD, Sanap R.V., Patel KG, Sudhikumar AV.  2018.  First description of the female of Chrysilla volupe (Karsch, 1879) (Araneae: Salticidae: Chrysillini) from India, with notes on the species’ distribution and life history. Arthropoda Selecta. 27(2):143-153.
Mirza ZA, Gowande GG, Patil R, Ambekar M, Patel H.  2018.  First appearance deceives many: disentangling the species complex using an integrated approach.. PeerJ. 6:e5341.
Viswan NA, HarshaRani GVani, Stefan MI, Bhalla US.  2018.  FindSim: A Framework for Integrating Neuronal Data and Signaling Models.. Front Neuroinform. 12:38.
Honda A, Kita T, Seshadri SVidhya, Misaki K, Ahmed Z, Ladbury JE, Richardson GP, Yonemura S, Ladher RK.  2018.  FGFR1-mediated protocadherin-15 loading mediates cargo specificity during intraflagellar transport in inner ear hair-cell kinocilia.. Proc Natl Acad Sci U S A. 115(33):8388-8393.
Khan I, Prakash A, Issar S, Umarani M, Sasidharan R, Masagalli JN, Lama P, Venkatesan R, Agashe D.  2018.  Female Density-Dependent Chemical Warfare Underlies Fitness Effects of Group Sex Ratio in Flour Beetles. American Naturalist.
Bhaumik V., Kunte K.  2018.   Female butterflies modulate investment in reproduction and flight in response to monsoon-driven migrations. OIKOS. 127 (2):285-296.
Kumar S, Mahajan S, Jain S.  2018.  Feedbacks from the metabolic network to the genetic network reveal regulatory modules in E. coli and B. subtilis.. PLoS One. 13(10):e0203311.
Weinert T, Olieric V, Waltersperger S, Panepucci E, Chen L, Zhang H, Zhou D, Rose J, Ebihara A, Kuramitsu S et al..  2015.  Fast native-SAD phasing for routine macromolecular structure determination.. Nat Methods. 12(2):131-3.
Banerjee A, Grazon C, Nadal B, Pons T, Krishnan Y, Dubertret B.  2015.  Fast, Efficient, and Stable Conjugation of Multiple DNA Strands on Colloidal Quantum Dots.. Bioconjug Chem. 26(8):1582-9.
Thutupalli S, Uppaluri S, Constable GWA, Levin SA, Stone HA, Tarnita CE, Brangwynne CP.  2017.  Farming and public goods production in Caenorhabditis elegans populations.. Proc Natl Acad Sci U S A. 114(9):2289-2294.
Palavalli-Nettimi R, Sane SP.  2018.  Fairyflies.. Curr Biol. 28(23):R1331-R1332.
Rahman MMostafizur, Shukla A, Chattarji S.  2018.  Extinction recall of fear memories formed before stress is not affected despite higher theta activity in the amygdala.. Elife. 7
Manjila SB, Kuruvilla M, Ferveur J-F, Sane SP, Hasan G.  2019.  Extended Flight Bouts Require Disinhibition from GABAergic Mushroom Body Neurons.. Curr Biol. 29(2):283-293.e5.
Sengupta I, Udgaonkar JB.  2017.  Expression and purification of single cysteine-containing mutant variants of the mouse prion protein by oxidative refolding.. Protein Expr Purif.
Godbole A, Dubey AK, Mitra R, Reddy PS, Mathew MK.  2015.  Expression and purification of OsVDAC4.. Methods Enzymol. 556:51-75.
Mandalaparthy V, Sanaboyana VRamana, Rafalia H, Gosavi S.  2018.  Exploring the effects of sparse restraints on protein structure prediction.. Proteins. 86(2):248-262.
G Kumar A, Sarkar P, Jafurulla M, Singh SPal, Srinivas G, Pande G, Chattopadhyay A.  2019.  Exploring Endocytosis and Intracellular Trafficking of the Human Serotonin Receptor.. Biochemistry.
Khan I, Prakash A, Agashe D.  2017.  Experimental evolution of insect immune memory versus pathogen resistance.. Proc Biol Sci. 284(1869)
Saxena K, Webster J, Hallas-Potts A, Mackenzie R, Spooner PA, Thomson D, Kind P, Chatterji S, Morris RGM.  2018.  Experiential contributions to social dominance in a rat model of fragile-X syndrome.. Proc Biol Sci. 285(1880)
Ganesh S, P HAhmed, Nadella RKumar, More RPrabhakar, Sheshadri M, Viswanath B, Rao M, Jain S, Mukherjee O.  2019.  Exome sequencing in families with severe mental illness identifies novel and rare variants in genes implicated in Mendelian neuropsychiatric syndromes.. Psychiatry Clin Neurosci. 73(1):11-19.
Kunte K, Agashe D.  2015.  Evolutionary Biology. Current Science. 108:1835-1873.
Joshi J, Prakash A, Kunte K.  2017.  Evolutionary Assembly of Communities in Butterfly Mimicry Rings.. Am Nat. 189(4):E58-E76.
Sudha G, Naveenkumar N, Srinivasan N.  2015.  Evolutionary and structural analyses of heterodimeric proteins composed of subunits with same fold.. Proteins. 83(10):1766-86.
Strauss SKaminski, Schirman D, Jona G, Brooks AN, Kunjapur AM, Ba ANNguyen, Flint A, Solt A, Mershin A, Dixit A et al..  2019.  Evolthon: A community endeavor to evolve lab evolution.. PLoS Biol. 17(3):e3000182.
Suratekar R, Panda A, Padinjat R, Krishna S.  2018.  Evidence of sinks and sources in the phospholipase C activated PIP2 cycle.. FEBS Lett.
Br A, Dovih P, Ramakrishnan U, Liang E, Mendenhall I, Hong DLWen, Smith JGD.  2019.  Evidence of filovirus and henipavirus in bats and bat harvesters, India. International Journal of Infectious Diseases. 79(Suppl.1):60.
Bendigiri C, Harini K, Yenkar S, Zinjarde S, Sowdhamini R, RaviKumar A.  2018.  Evaluating Ylehd, a recombinant epoxide hydrolase from Yarrowia lipolytica as a potential biocatalyst for the resolution of benzyl glycidyl ether. RSC ADVANCES. 8(23):12918-12926.
Nayak G, Honguntikar SD, Kalthur SGuruprasad, D'Souza ASylvan, Mutalik S, Setty MM, Kalyankumar R, Krishnamurthy H, Kalthur G, Adiga SKumar.  2016.  Ethanolic extract of Moringa oleifera Lam. leaves protect the pre-pubertal spermatogonial cells from cyclophosphamide-induced damage.. J Ethnopharmacol. 182:101-9.
Sane SP.  2017.  Eppur si vola (and yet it flies).. J Exp Biol. 220(Pt 4):514-516.
KKrishnadas M, Kumar A, Comita LS.  2016.  Environmental gradients structure tropical tree assemblages at the regional scale . JOURNAL OF VEGETATION SCIENCE . 27(6):1117-1128.
Ramakrishnan G, Ochoa-Montaño B, Raghavender US, Mudgal R, Joshi AG, Chandra NR, Sowdhamini R, Blundell TL, Srinivasan N.  2015.  Enriching the annotation of Mycobacterium tuberculosis H37Rv proteome using remote homology detection approaches: insights into structure and function.. Tuberculosis (Edinb). 95(1):14-25.
Neelamraju S, Gosavi S, Wales DJ.  2018.  Energy Landscape of the Designed Protein Top7.. J Phys Chem B.
Shingate P, Warwicker J, Sowdhamini R.  2015.  Energetic Calculations to Decipher pH-Dependent Oligomerization and Domain Swapping of Proteins.. PLoS One. 10(6):e0127716.
Hemalatha A, Prabhakara C, Mayor S.  2016.  Endocytosis of Wingless via a dynamin-independent pathway is necessary for signaling in Drosophila wing discs.. Proc Natl Acad Sci U S A.
Husain K, Rao M.  2017.  Emergent Structures in an Active Polar Fluid: Dynamics of Shape, Scattering, and Merger.. Phys Rev Lett. 118(7):078104.
Brocke E, Bhalla US, Djurfeldt M, Kotaleski JHellgren, Hanke M.  2016.  Efficient Integration of Coupled Electrical-Chemical Systems in Multiscale Neuronal Simulations.. Front Comput Neurosci. 10:97.
Varma V, Iyengar SB, Sankaran M.  2016.  Effects of nutrient addition and soil drainage on germination of N-fixing and non-N-fixing tropical dry forest tree species . Plant Ecology. 217(1043–1054):1043–1054.
Varma V, Catherin AM, Sankaran M.  2018.  Effects of increased N and P availability on biomass allocation and root carbohydrate reserves differ between N-fixing and non-N-fixing savanna tree seedlings.. Ecol Evol. 8(16):8467-8476.
Hansen S, Krishna S, Semsey S, Svenningsen SLo.  2015.  Effects of Four Different Regulatory Mechanisms on the Dynamics of Gene Regulatory Cascades.. Sci Rep. 5:12186.
Burrows M, Ghosh A, Yeshwanth HM, Dorosenko M, Sane SP.  2019.  Effectiveness and efficiency of two distinct mechanisms for take-off in a derbid planthopper insect.. J Exp Biol. 222(Pt 2)
Sreekar R, Srinivasan U, Mammides C, Chen J, Goodale UManage, Kotagama SWimalaband, Sidhu S, Goodale E.  2015.  The effect of land-use on the diversity and mass-abundance relationships of understory avian insectivores in Sri Lanka and southern India.. Sci Rep. 5:11569.
Sowdhamini R, Mizuguchi K.  2017.  Editorial-Sequences and topology.. Curr Opin Struct Biol.
Spang A, Mayor S.  2018.  Editorial Overview: Membranes and organelles: rethinking membrane structure, function and compartments.. Curr Opin Cell Biol. 53:A1-A3.
Nussinov R, Udgaonkar JB.  2016.  Editorial overview: Folding and binding: Dynamic conformational heterogeneity is pivotal to cell life.. Curr Opin Struct Biol. 36:iv-vi.
Marthews T.R, Nelaballi S., Ratnam J., Sankaran M..  2015.  Ecosystem monitoring and forest census studies in South Asia (Meeting Report). Current Science. 180:1779–1782.
Khan I, Agashe D, Rolff J.  2017.  Early-life inflammation, immune response and ageing.. Proc Biol Sci. 284(1850)
Rahman MMostafizur, Callaghan CK, Kerskens CM, Chattarji S, O'Mara SM.  2016.  Early hippocampal volume loss as a marker of eventual memory deficits caused by repeated stress.. Sci Rep. 6:29127.
Wang ET, J Taliaferro M, Lee J-A, Sudhakaran IP, Rossoll W, Gross C, Moss KR, Bassell GJ.  2016.  Dysregulation of mRNA Localization and Translation in Genetic Disease.. J Neurosci. 36(45):11418-11426.
Dhawale N, Mandre S, Venkadesan M.  2019.  Dynamics and stability of running on rough terrains.. R Soc Open Sci. 6(3):181729.
Schulze A, Gomez-Marin A, Rajendran VG, Lott G, Musy M, Ahammad P, Deogade A, Sharpe J, Riedl J, Jarriault D et al..  2015.  Dynamical feature extraction at the sensory periphery guides chemotaxis.. Elife. 4
Tomar A, Polygalov D, Chattarji S, McHugh TJ.  2015.  The dynamic impact of repeated stress on the hippocampal spatial map.. Hippocampus. 25(1):38-50.
Park DEsther, Cheng J, Berrios C, Montero J, Cortés-Cros M, Ferretti S, Arora R, Tillgren ML, Gokhale PC, DeCaprio JA.  2019.  Dual inhibition of MDM2 and MDM4 in virus-positive Merkel cell carcinoma enhances the p53 response.. Proc Natl Acad Sci U S A. 116(3):1027-1032.
Richhariya S, Jayakumar S, Sukumar SKumar, Hasan G.  2018.  dSTIM- and Ral/Exocyst-Mediated Synaptic Release from Pupal Dopaminergic Neurons Sustains Flight.. eNeuro. 5(3)
Krishnan L, Barua D, Sankaran M.  2019.  Dry-forest tree species with large seeds and low stem specific density show greater survival under drought. JOURNAL OF TROPICAL ECOLOGY. 35(1):26-33.
Sen S, Goluguri RReddy, Udgaonkar JB.  2017.  A Dry Transition State More Compact Than the Native State Is Stabilized by Non-Native Interactions during the Unfolding of a Small Protein.. Biochemistry.
Oli CBahadur, Panthi S, Subedi N, Ale G, Pant G, Khanal G, Bhattarai S.  2018.  Dry season diet composition of four-horned antelope in tropical dry deciduous forests, Nepal.. PeerJ. 6:e5102.
Yadav S, Cockcroft S, Raghu P.  2016.  The Drosophila photoreceptor as a model system for studying signalling at membrane contact sites.. Biochem Soc Trans. 44(2):447-51.
Jayakumar S, Richhariya S, O Reddy V, Texada MJ, Hasan G.  2016.  Drosophila larval to pupal switch under nutrient stress requires IP3R/Ca(2+) signalling in glutamatergic interneurons.. Elife. 5
Gunage RD, Dhanyasi N, Reichert H, VijayRaghavan K.  2017.  Drosophila adult muscle development and regeneration.. Semin Cell Dev Biol.
Chakrabarti P, Kolay S, Yadav S, Kumari K, Nair A, Trivedi D, Raghu P.  2015.  A dPIP5K dependent pool of phosphatidylinositol 4,5 bisphosphate (PIP2) is required for G-protein coupled signal transduction in Drosophila photoreceptors.. PLoS Genet. 11(1):e1004948.
Soman S, Bhattacharya A, Panicker MM.  2019.  Dopamine requires unique residues to signal via the serotonin 2A receptor.. Neuroscience.
Iyengar SB, Sumanta B., Barua D, Mishra C, Sankaran M.  2017.  A dominant dwarf shrub increases diversity of herbaceous plant communities in a Trans-Himalayan rangeland. Plant Ecology. 218(7):843–854.
Ashok A, Naaz S, Kota LNarayanan, Sen S, Purushottam M, Faruq M, Kumari R, Yadav V, Kannan R, Jain S et al..  2019.  Does retinoic acid reverse cell cycle dysregulation in Alzheimer's disease lymphocytes? Asian J Psychiatr. 39:174-177.
Malhotra S, Mathew OK, Sowdhamini R.  2015.  DOCKSCORE: a webserver for ranking protein-protein docked poses.. BMC Bioinformatics. 16:127.
Taylor MJ, Husain K, Gartner ZJ, Mayor S, Vale RD.  2017.  A DNA-Based T Cell Receptor Reveals a Role for Receptor Clustering in Ligand Discrimination.. Cell. 169(1):108-119.e20.
Goyal A, Maslov S.  2018.  Diversity, Stability, and Reproducibility in Stochastically Assembled Microbial Ecosystems.. Phys Rev Lett. 120(15):158102.
Krishnan A, Tamma K.  2016.  Divergent morphological and acoustic traits in sympatric communities of Asian barbets.. R Soc Open Sci. 3(8):160117.
Khan I, Prakash A, Agashe D.  2016.   Divergent immune priming responses across flour beetle life stages and populations . ECOLOGY AND EVOLUTION . 6(21):7847-7855.
Nandkishore N, Vyas B, Javali A, Ghosh S, Sambasivan R.  2018.  Divergent early mesoderm specification underlies distinct head and trunk muscle programmes in vertebrates.. Development. 145(18)
Viswanath B, Rao NP, Narayanaswamy JC, Sivakumar PT, Kandasamy A, Kesavan M, Mehta UMeherwan, Venkatasubramanian G, John JP, Mukherjee O et al..  2018.  Discovery biology of neuropsychiatric syndromes (DBNS): a center for integrating clinical medicine and basic science.. BMC Psychiatry. 18(1):106.
Shukla A, Bhattacharyya A, Kuppusamy L, Srivas M, Thattai M.  2017.  Discovering vesicle traffic network constraints by model checking.. PLoS One. 12(7):e0180692.
Nordenfelt P, Moore TI, Mehta SB, Kalappurakkal JMathew, Swaminathan V, Koga N, Lambert TJ, Baker D, Waters JC, Oldenbourg R et al..  2017.  Direction of actin flow dictates integrin LFA-1 orientation during leukocyte migration.. Nat Commun. 8(1):2047.
Jabir MV, N Chaitanya A, Mathew M, Samanta GK.  2017.  Direct transfer of classical non-separable states into hybrid entangled two photon states.. Sci Rep. 7(1):7331.
Agavekar G, Agashe D, Economo EP.  2019.  Dimensions of ant diversity on a small tropical island. INSECT CONSERVATION AND DIVERSITY. 12(2):161-171.
Saha S, Lee I-H, Polley A, Groves JT, Rao M, Mayor S.  2015.  Diffusion of GPI-anchored proteins is influenced by the activity of dynamic cortical actin.. Mol Biol Cell. 26(22):4033-45.
Karnawat V, Gogia S, Balaram H, Puranik M.  2015.  Differential Distortion of Purine Substrates by Human and Plasmodium falciparum Hypoxanthine-Guanine Phosphoribosyltransferase to Catalyse the Formation of Mononucleotides.. Chemphyschem. 16(10):2172-81.
Chakravarthi A, Rajus S, Kelber A, Dacke M, Baird E.  2018.  Differences in spatial resolution and contrast sensitivity of flight control in the honeybees and .. J Exp Biol.
Phalnikar K, Kunte K, Agashe D.  2018.  Dietary and developmental shifts in butterfly-associated bacterial communities.. R Soc Open Sci. 5(5):171559.

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