Ghosh P, Grellscheid SNagaraja, Sowdhamini R. 2016. A tale of two paralogs: human Transformer2 proteins with differential RNA-binding affinities.. J Biomol Struct Dyn. 34(9):1979-86.
Tiwari V, Sowdhamini R. 2023. Structure modelling of odorant receptor from and identification of potential repellent molecules.. Comput Struct Biotechnol J. 21:2204-2214.
Tiwari V, Sowdhamini R. 2023. Structural modelling and dynamics of full-length of TLR10 sheds light on possible modes of dimerization, ligand binding and mechanism of action.. Curr Res Struct Biol. 5:100097.
Manjunath L, Coombes D, Davies J, Dhurandhar M, Tiwari VR, Dobson RCJ, Sowdhamini R, Ramaswamy S, Bose S. 2020. Quaternary variations in the structural assembly of N-acetylglucosamine-6-phosphate deacetylase from Pasteurella multocida.. Proteins.
Indu M, Meera B, Sivakumar K, Mahadevan C, Shafi K, Nagarathnam B, Sowdhamini R, Sakuntala M. 2022. ‘Priming’ protects Piper nigrum L. from Phytophthora capsici through reinforcement of phenylpropanoid pathway and possible enhancement of Piperine biosynthesis . Front. Plant Sci.. 13
Gandhimathi A, Ghosh P, Hariharaputran S, Mathew OK, Sowdhamini R. 2016. PASS2 database for the structure-based sequence alignment of distantly related SCOP domain superfamilies: update to version 5 and added features.. Nucleic Acids Res. 44(D1):D410-4.
Gandhimathi A, Sowdhamini R. 2016. Molecular modelling of human 5-hydroxytryptamine receptor (5-HT2A) and virtual screening studies towards the identification of agonist and antagonist molecules.. J Biomol Struct Dyn. 34(5):952-70.
Manikkaraja C, Bhavika M, Singh R, Nagarathnam B, George G, Gulyani A, Archunan G, Sowdhamini R. 2020. Molecular and functional characterization of buffalo nasal epithelial odorant binding proteins and their structural insights by in silico and biochemical approaches. J Biomol Struct Dyn. :1-24.
Verma S, Reddy P, Sowdhamini R. 2023. Integrated approaches for the recognition of small molecule inhibitors for Toll-like receptor 4.. Comput Struct Biotechnol J. 21:3680-3689.
Somasundaram S, Véry A-A, Vinekar RS, Ishikawa T, Kumari K, Pulipati S, Kumaresan K, Corratgé-Faillie C, Sowdhamini R, Parida A et al.. 2020. Homology modeling identifies crucial amino-acid residues that confer higher Na+ transport capacity of OcHKT1;5 from Oryza coarctata Roxb.. Plant Cell Physiol.
Ghosh P, Sowdhamini R. 2016. Genome-wide survey of putative RNA-binding proteins encoded in the human proteome.. Mol Biosyst. 12(2):532-40.
Bendigiri C, Harini K, Yenkar S, Zinjarde S, Sowdhamini R, RaviKumar A. 2018. Evaluating Ylehd, a recombinant epoxide hydrolase from Yarrowia lipolytica as a potential biocatalyst for the resolution of benzyl glycidyl ether. RSC ADVANCES. 8(23):12918-12926.
Sowdhamini R, Mizuguchi K. 2017. Editorial-Sequences and topology.. Curr Opin Struct Biol.
Ghosh P, Joshi A, Guita N, Offmann B, Sowdhamini R. 2019. EcRBPome: a comprehensive database of all known E. coli RNA-binding proteins.. BMC Genomics. 20(1):403.
Karpe SD, Dhingra S, Brockmann A, Sowdhamini R. 2017. Computational genome-wide survey of odorant receptors from two solitary bees Dufourea novaeangliae (Hymenoptera: Halictidae) and Habropoda laboriosa (Hymenoptera: Apidae).. Sci Rep. 7(1):10823.
Chauhan PKumar, Sowdhamini R. 2023. Computational analysis of the flexibility in the disordered linker region connecting LIM domains in cysteine-glycine-rich protein.. Front Genet. 14:1134509.
Nishad S, Chauhan PKumar, Sowdhamini R, Ghosh A. 2021. Chronic exposure of humans to high level natural background radiation leads to robust expression of protective stress response proteins.. Sci Rep. 11(1):1777.