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Author Title [ Type(Desc)] Year
Journal Article
Ghodke PP, Gore KR, Harikrishna S, Samanta B, Kottur J, Nair DT, Pradeepkumar PI.  2016.  The N(2)-Furfuryl-deoxyguanosine Adduct Does Not Alter the Structure of B-DNA.. J Org Chem. 81(2):502-11.
Leblanc K, Quéguiner B, Diaz F, Cornet V, Michel-Rodriguez M, de Madron XDurrieu, Bowler C, Malviya S, Thyssen M, Grégori G et al..  2018.  Nanoplanktonic diatoms are globally overlooked but play a role in spring blooms and carbon export.. Nat Commun. 9(1):953.
Chattarji S, Tomar A, Suvrathan A, Ghosh S, Rahman MMostafizur.  2015.  Neighborhood matters: divergent patterns of stress-induced plasticity across the brain.. Nat Neurosci. 18(10):1364-75.
Flegontova O, Flegontov P, Malviya S, Poulain J, de Vargas C, Bowler C, Lukeš J, Horák A.  2018.  Neobodonids are dominant kinetoplastids in the global ocean.. Environ Microbiol. 20(2):878-889.
Gowande G, Mishra A, Mirza ZA.  2016.  Neotype designation for Calotes versicolor Daudin, 1802 (Sauria: Agamidae) with notes on its systematics.. Zootaxa. 4126(2):271-9.
Sadaf S, O Reddy V, Sane SP, Hasan G.  2015.  Neural control of wing coordination in flies.. Curr Biol. 25(1):80-6.
Sane SP.  2016.  Neurobiology and biomechanics of flight in miniature insects.. Curr Opin Neurobiol. 41:158-166.
Jayakumar S, Hasan G.  2018.  Neuronal Calcium Signaling in Metabolic Regulation and Adaptation to Nutrient Stress.. Front Neural Circuits. 12:25.
Ghosh S, Chattarji S.  2015.  Neuronal encoding of the switch from specific to generalized fear.. Nat Neurosci. 18(1):112-20.
Shivaprasad PV.  2019.  New clues into the mechanisms of rice domestication.. J Biosci. 44(2)
Shivaprasad PV.  2019.  New clues into the mechanisms of rice domestication. Journal of Biosciences.
Chaitanya R., Lajmi A, Giri VB.  2018.   A new cryptic, rupicolous species of Hemidactylus Oken, 1817 (Squamata: Gekkonidae) from Meghamalai, Tamil Nadu, India. ZOOTAXA. 4374(1):49-70.
Mirza ZA.  2018.  A new cryptic species of ground-dwelling Hemidactylus (Squamata: Gekkonidae) from southern India. Phyllomedusa. 17(2):169-180.
Olsson SB.  2017.  New Frontiers for Chemical Ecology: Reaffirming a Commitment to the Göteborg Resolution : Guest Editorial: *The Bengaluru Consortium.. J Chem Ecol. 43(1):2-3.
Giri VB, Gower DJ, Das A, LALREMSANGA HT, LALRONUNGA S, Captain A, Deepak V..  2019.  A new genus and species of natricine snake from northeast India. ZOOTAXA. 4603(2):241-264.
Mirza ZA, Mondal A.  2018.  A new genus Gravelyia with two species of the family Nemesiidae (Araneae: Mygalomorphae) from India. Acta Arachnologica. 67(1):43-48.
Mirza ZA, Bhosale H, Patil R.  2017.  A new large species of gecko of the genus Hemidactylus Oken, 1817 (Reptilia: Sauria: Gekkonidae) from the Eastern Ghats, India.. C R Biol.
Mirza ZA, Vyas R, Patel H, Maheta J, Sanap RV.  2016.  A New Miocene-Divergent Lineage of Old World Racer Snake from India.. PLoS One. 11(3):e0148380.
Kiran C.G, Kalesh S., Kunte K.  2015.  A new species of damselfly, Protosticta ponmudiensis (Odonata: Zygoptera: Platystictidae) from Ponmudi Hills in the Western Ghats of India. Journal of Threatened Taxa. 7(5):7146-7151.
Sadasivan K, Ramesh M.B, Palot MJafer, Ambekar M, Mirza Z.A.  2018.  A new species of fan-throated lizard of the genus Sitana Cuvier, 1829 from coastal Kerala, southern India. ZOOTAXA. 4374(4):545-564.
Kunte K.  2015.  A new species of Hypolycaena (Lepidoptera: Lycenidae) from Arunachal Pradesh, north-eastern India. The Journal of Research on the Lepidoptera. 48:21-27.
Giri VB, Bauer AM, Mohapatra PP, Srinivasulu C, Agarwal I.  2017.  A new species of large-bodied, tuberculate Hemidactylus Oken (Squamata: Gekkonidae) from the Eastern Ghats, India.. Zootaxa. 4347(2):331-345.
Marathe K, Yeshwanth HM, Basu DN, Kunte K.  2017.  A new species of Platypleura Amyot & Audinet-Serville, 1843 (Hemiptera: Cicadidae: Cicadinae) from the Eastern Ghats of Andhra Pradesh, India. Zootaxa. 4311(4):523-536.
Giri VB, Deepak V., Captain A, Das A, Das S, Rajkumar KP, Rathish RL, Gower DJ.  2017.  A new species of Rhabdops Boulenger, 1893 (Serpentes: Natricinae) from the northern Western Ghats region of India. Zootaxa. 4319(1):27-52.
Khandekar A.  2019.  A new species of rock-dwelling Cnemaspis Strauch, 1887 (Squamata: Gekkonidae) from Tamil Nadu, southern India. ZOOTAXA. 4571( 383-397):383-397.
Agarwal I, Mirza ZA, Pal S, Maddock ST, Mishra A, Bauer AM.  2016.  A new species of the Cyrtodactylus (Geckoella) collegalensis (Beddome, 1870) complex (Squamata: Gekkonidae) from Western India.. Zootaxa. 4170(2):339-354.
Mirza Z.A, Sanap R.V., Kunte K.  2016.  A new species of the genus Thaicharmus Kovařík, 1995 (Scorpiones: Buthidae) from northeast India. Euscorpius. 215:1-11.
Sondhi Y, Kitching IJ, Basu DNath, Kunte K.  2017.  A new species of Theretra Hubner (Lepidoptera: Sphingidae) from the southern Western Ghats, India. ZOOTAXA. 4323(2):185-196.
Joshi S, Kosterin OE, Kunte K.  2016.  New status for Fraser's forgotten Aciagrion approximans krishna, stat. nov (Odonata: Zygoptera: Coenagrionidae) from the Western Ghats of India. International Journal of Odonatology. 19(1-2):41-51.
Lissovsky AA, McDonough M, Dahal N, Jin W, Liu S, Ruedas LA.  2017.  A new subspecies of large-eared pika, Ochotona macrotis (Lagomorpha: Ochotonidae), from the Eastern Himalaya. Russian J. Theriol. 16(1):30–42.
Tiruvaimozhi YV, Varma V, Sankaran M.  2018.  Nitrogen fixation ability explains leaf chemistry and arbuscular mycorrhizal responses to fertilization . PLANT ECOLOGY . 219(4):391-401.
Sachdeva H, Barma M, Rao M.  2016.  Nonequilibrium description of de novo biogenesis and transport through Golgi-like cisternae.. Sci Rep. 6:38840.
Gowrishankar K, Rao M.  2016.  Nonequilibrium phase transitions, fluctuations and correlations in an active contractile polar fluid.. Soft Matter. 12(7):2040-6.
Mithileshwari C, Srivastava T, Kumar V, Kumar A, Umapathy G.  2016.  Non-invasive assessment of fecal progestagens and pregnancy detection in Himalayan musk deer (Moschus chrysogaster).. Theriogenology. 85(2):216-23.
Wickramasinghe N, Robin VV, Ramakrishnan U, Reddy S, Seneviratne SS.  2017.  Non-sister Sri Lankan white-eyes (genus Zosterops) are a result of independent colonizations.. PLoS One. 12(8):e0181441.
Krishnaswamy J., Vaidyanathan S., Rajagopalan B., Bonell M., Sankaran M., Bhalla R.S, Badiger S..  2015.  Non‑stationary and non‑linear influence of ENSO and Indian Ocean Dipole on the variability of Indian monsoon rainfall and extreme rain events. Climate Dynamics. 45:175-184..
Marcel N, Sarin A.  2016.  Notch1 regulated autophagy controls survival and suppressor activity of activated murine T-regulatory cells.. Elife. 5
Naik S, MacFarlane M, Sarin A.  2015.  Notch4 Signaling Confers Susceptibility to TRAIL-Induced Apoptosis in Breast Cancer Cells.. J Cell Biochem. 116(7):1371-80.
Mudgal R, Sandhya S, Kumar G, Sowdhamini R, Chandra NR, Srinivasan N.  2015.  NrichD database: sequence databases enriched with computationally designed protein-like sequences aid in remote homology detection.. Nucleic Acids Res. 43(Database issue):D300-5.
Ray S, Chintaluri C, Bhalla US, Wójcik DK.  2016.  NSDF: Neuroscience Simulation Data Format.. Neuroinformatics. 14(2):147-67.
Singh P, Seshasayee ASai Narain.  2017.  Nucleoid-Associated Proteins: Genome Level Occupancy and Expression Analysis.. Methods Mol Biol. 1624:85-97.
Surana P, Das R.  2016.  Observing a late folding intermediate of Ubiquitin at atomic resolution by NMR.. Protein Sci.
Sujkowski A, Ramesh D, Brockmann A, Wessells R.  2017.  Octopamine Drives Endurance Exercise Adaptations in Drosophila.. Cell Rep. 21(7):1809-1823.
Saxena N, Natesan D, Sane SP.  2018.  Odor source localization in complex visual environments by fruit flies.. J Exp Biol. 221(Pt 2)
Adurthi S, Kumar MM, Vinodkumar HS, Mukherjee G, Krishnamurthy H, K Acharya K, Bafna UD, Uma DK, Abhishekh B, Krishna S et al..  2017.  Oestrogen Receptor-α binds the FOXP3 promoter and modulates regulatory T-cell function in human cervical cancer.. Sci Rep. 7(1):17289.
Gupta P, Bhalla US.  2016.  Olfaction: Minority odors get equal say.. Elife. 5
Gupta P, Albeanu DF, Bhalla US.  2015.  Olfactory bulb coding of odors, mixtures and sniffs is a linear sum of odor time profiles.. Nat Neurosci. 18(2):272-81.
Parchure A, Vyas N, Ferguson C, Parton RG, Mayor S.  2015.  Oligomerization and endocytosis of Hedgehog is necessary for its efficient exovesicular secretion.. Mol Biol Cell. 26(25):4700-17.
Nair J, Sanmugam PV, Karpe SD, Ramakrishnan U, Olsson SB.  2018.  An optimized protocol for large-scale in situ sampling and analysis of volatile organic compounds. Ecology and Evolution. 8(11):59242-5935.
Thattai M.  2017.  Organelle acidification: an ancient cellular leak detector.. BMC Biol. 15(1):51.
Ramakrishnan N, Ipsen JH, Rao M, Kumar PBSunil.  2015.  Organelle morphogenesis by active membrane remodeling.. Soft Matter. 11(12):2387-93.
Reynolds AM, Reynolds DR, Sane SP, Hu G, Chapman JW.  2016.  Orientation in high-flying migrant insects in relation to flows: mechanisms and strategies.. Philos Trans R Soc Lond B Biol Sci. 371(1704)
Jethva PN, Udgaonkar JB.  2018.  The Osmolyte TMAO Modulates Protein Folding Cooperativity by Altering Global Protein Stability.. Biochemistry.
Yadahalli S, Gosavi S.  2017.  Packing energetics determine the folding routes of the RNase-H proteins.. Phys Chem Chem Phys.
Pincha N, Hajam EYousaf, Badarinath K, Batta SPrakash Ra, Masudi T, Dey R, Andreasen P, Kawakami T, Samuel R, George R et al..  2018.  PAI1 mediates fibroblast-mast cell interactions in skin fibrosis.. J Clin Invest.
Moulick R, Das R, Udgaonkar JB.  2015.  Partially Unfolded Forms of the Prion Protein Populated under Misfolding-promoting Conditions: CHARACTERIZATION BY HYDROGEN EXCHANGE MASS SPECTROMETRY AND NMR.. J Biol Chem. 290(42):25227-40.
Gandhimathi A, Ghosh P, Hariharaputran S, Mathew OK, Sowdhamini R.  2016.  PASS2 database for the structure-based sequence alignment of distantly related SCOP domain superfamilies: update to version 5 and added features.. Nucleic Acids Res. 44(D1):D410-4.
Ghosh P, Bhattacharyya T, Mathew OK, Sowdhamini R.  2019.  PASS2 version 6: a database of structure-based sequence alignments of protein domain superfamilies in accordance with SCOPe.. Database (Oxford). 2019
Khan I, Prakash A, Agashe D.  2019.  Pathogen susceptibility and fitness costs explain variation in immune priming across natural populations of flour beetles.. J Anim Ecol.
Sabareesan AThody, Singh J, Roy S, Udgaonkar JB, Mathew MK.  2016.  The Pathogenic A116V Mutation Enhances Ion-Selective Channel Formation by Prion Protein in Membranes.. Biophys J. 110(8):1766-76.
Singh J, Udgaonkar JB.  2016.  The pathogenic mutation T182A converts the prion protein into a molten globule-like conformation whose misfolding to oligomers but not to fibrils is drastically accelerated.. Biochemistry. 55(3):459-69.
Sabareesan AT, Udgaonkar JB.  2016.  Pathogenic mutations within the disordered palindromic region of the prion protein induce structure therein and accelerate the formation of misfolded oligomers.. J Mol Biol.
Varma V., Ratnam J., Viswanathan V., Osuri A.M, Biesmeijer J.C, Madhusudan M.D, Sankaran M..  2015.  Perceptions of priority issues in the conservation of biodiversity and ecosystems in India. Biological Conservation . 187:201-211.
Murata S, Brockmann A, Tanimura T.  2017.  Pharyngeal stimulation with sugar triggers local searching behavior in Drosophila.. J Exp Biol.
Das A, Polley A, Rao M.  2016.  Phase Segregation of Passive Advective Particles in an Active Medium.. Phys Rev Lett. 116(6):068306.
Saha S, Prakash V, Halder S, Chakraborty K, Krishnan Y.  2015.  A pH-independent DNA nanodevice for quantifying chloride transport in organelles of living cells.. Nat Nanotechnol. 10(7):645-51.
Sharma S, Mathre S, Ramya V, Shinde D, Raghu P.  2019.  Phosphatidylinositol 5 Phosphate 4-Kinase Regulates Plasma-Membrane PIP Turnover and Insulin Signaling.. Cell Rep. 27(7):1979-1990.e7.
Kamalesh K, Trivedi D, Toscano S, Sharma S, Kolay S, Raghu P.  2017.  Phosphatidylinositol 5-phosphate 4-kinase regulates early endosomal dynamics during clathrin-mediated endocytosis.. J Cell Sci.
Balakrishnan SS, Basu U, Raghu P.  2015.  Phosphoinositide signalling in Drosophila.. Biochim Biophys Acta. 1851(6):770-84.
Thakur R, Panda A, Coessens E, Raj N, Yadav S, Balakrishnan S, Zhang Q, Georgiev P, Basak B, Pasricha R et al..  2016.  Phospholipase D activity couples plasma membrane endocytosis with retromer dependent recycling.. Elife. 5
Cockcroft S, Raghu P.  2018.  Phospholipid transport protein function at organelle contact sites.. Curr Opin Cell Biol. 53:52-60.
Agarwal I, Ramakrishnan U.  2017.  A phylogeny of open-habitat lizards (Squamata: Lacertidae: Ophisops) supports the antiquity of Indian grassy biomes. JOURNAL OF BIOGEOGRAPHY . 44(9):2021-2032.
Kosmalska AJoanna, Casares L, Elosegui-Artola A, Thottacherry JJose, Moreno-Vicente R, González-Tarragó V, del Pozo MÁngel, Mayor S, Arroyo M, Navajas D et al..  2015.  Physical principles of membrane remodelling during cell mechanoadaptation.. Nat Commun. 6:7292.
Vijayakrishnan S, Kumar MAnanda, Umapathy G, Kumar V, Sinha A.  2018.  Physiological stress responses in wild Asian elephants Elephas maximus in a human-dominated landscape in the Western Ghats, southern India.. Gen Comp Endocrinol. 266:150-156.
Mathew OKaleeckal, Sowdhamini R.  2016.  PIMA: Protein-Protein interactions in Macromolecular Assembly - a web server for its Analysis and Visualization.. Bioinformation. 12(1):9-11.
Mathew OK, Sowdhamini R.  2016.  PIMADb: A Database of Protein-Protein Interactions in Huge Macromolecular Assemblies.. Bioinform Biol Insights. 10:105-9.
Seabloom EW, Borer ET, Buckley YM, Cleland EE, Davies KF, Firn J, W Harpole S, Hautier Y, Lind EM, MacDougall AS et al..  2015.  Plant species' origin predicts dominance and response to nutrient enrichment and herbivores in global grasslands.. Nat Commun. 6:7710.
Jain D, Narayanan N, Nair DT.  2016.  Plasticity in Repressor-DNA Interactions Neutralizes Loss of Symmetry in Bipartite Operators.. J Biol Chem. 291(3):1235-42.
Chandrasegaran K, Singh A, Laha M, Quader S.  2018.  Playing it safe? Behavioural responses of mosquito larvae encountering a fish predator ETHOLOGY ECOLOGY & EVOLUTION. 30(1):70-87.
Singh P, Macdonald DW.  2017.  Populations and activity patterns of clouded leopards and marbled cats in Dampa Tiger Reserve, India. JOURNAL OF MAMMALOGY. 98(5):1453-1462.
Sukhwal A, Sowdhamini R.  2015.  PPCheck: A Webserver for the Quantitative Analysis of Protein-Protein Interfaces and Prediction of Residue Hotspots.. Bioinform Biol Insights. 9:141-51.
Bhatia A, Moza S, Bhalla USingh.  2019.  Precise excitation-inhibition balance controls gain and timing in the hippocampus.. Elife. 8
Yang L, Ravikanthachari N, Mariño-Pérez R, Deshmukh R, Wu M, Rosenstein A, Kunte K, Song H, Andolfatto P.  2019.  Predictability in the evolution of Orthopteran cardenolide insensitivity.. Philos Trans R Soc Lond B Biol Sci. 374(1777):20180246.
Su S, Lim M, Kunte K.  2015.  Prey from the eyes of predators: Color discriminability of aposematic and mimetic butterflies from an avian visual perspective.. Evolution. 69(11):2985-94.
Das T, Ganguly S, Sengupta S, Rao M.  2015.  Pre-yield non-affine fluctuations and a hidden critical point in strained crystals.. Sci Rep. 5:10644.
Mahita J, Sowdhamini R.  2018.  Probing subtle conformational changes induced by phosphorylation and point mutations in the TIR domains of TLR2 and TLR3.. Proteins.
Mascarenhas NManuel, Gosavi S.  2016.  Protein Domain-Swapping Can Be a Consequence of Functional Residues.. J Phys Chem B. 120(28):6929-38.
Ashe S, Malhotra V, Raghu P.  2018.  Protein kinase D regulates metabolism and growth by controlling secretion of insulin like peptide.. Dev Biol. 434(1):175-185.
Sandhya S, Mudgal R, Kumar G, Sowdhamini R, Srinivasan N.  2016.  Protein sequence design and its applications.. Curr Opin Struct Biol. 37:71-80.
Broom A, Gosavi S, Meiering EM.  2015.  Protein unfolding rates correlate as strongly as folding rates with native structure.. Protein Sci. 24(4):580-7.
Nilofer C, Sukhwal A, Mohanapriya A, Kangueane P.  2017.  Protein-protein interfaces are vdW dominant with selective H-bonds and (or) electrostatics towards broad functional specificity.. Bioinformation. 13(6):164-173.
Richhariya S, Jayakumar S, Abruzzi K, Rosbash M, Hasan G.  2017.  A pupal transcriptomic screen identifies Ral as a target of store-operated calcium entry in Drosophila neurons.. Sci Rep. 7:42586.
Jha A, van Zanten TS, Philippe J-M, Mayor S, Lecuit T.  2018.  Quantitative Control of GPCR Organization and Signaling by Endocytosis in Epithelial Morphogenesis.. Curr Biol.
Bhatia D, Arumugam S, Nasilowski M, Joshi H, Wunder C, Chambon V, Prakash V, Grazon C, Nadal B, Maiti PK et al..  2016.  Quantum dot-loaded monofunctionalized DNA icosahedra for single-particle tracking of endocytic pathways.. Nat Nanotechnol.
Chakraborty D, Ramakrishnan U, Sinha A.  2015.  Quaternary climate change and social behavior shaped the genetic differentiation of an endangered montane primate from the southern edge of the Tibetan Plateau.. Am J Primatol. 77(3):271-84.
Richhariya S, Hasan G.  2017.  Ral function in muscle is required for flight maintenance in Drosophila.. Small GTPases. :1-6.
Nandi SKumar, Mandal R, Bhuyan PJyoti, Dasgupta C, Rao M, Gov NS.  2018.  A random first-order transition theory for an active glass.. Proc Natl Acad Sci U S A. 115(30):7688-7693.
Kaushik S, Nair AG, Mutt E, Subramanian HPrasanna, Sowdhamini R.  2016.  Rapid and enhanced remote homology detection by cascading hidden Markov model searches in sequence space.. Bioinformatics. 32(3):338-44.
Prakash V, Saha S, Chakraborty K, Krishnan Y.  2016.  Rational design of a quantitative, pH-insensitive, nucleic acid based fluorescent chloride reporter. Chemical Science . 7:1946-1953.
Baliga C, Majhi S, Mondal K, Bhattacharjee A, VijayRaghavan K, Varadarajan R.  2016.  Rational elicitation of cold-sensitive phenotypes.. Proc Natl Acad Sci U S A. 113(18):E2506-15.