Author Title [ Type(Desc)] Year
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Journal Article
Islam Z, Saravanan B, Walavalkar K, Farooq U, Singh AKumar, Sabarinathan R, Thakur J, Pandit A, Henikoff S, Notani D.  2023.  Active enhancers strengthen insulation by RNA-mediated CTCF binding at chromatin domain boundaries.. Genome Res.
Rheinbay E, Nielsen MMuhlig, Abascal F, Wala JA, Shapira O, Tiao G, Hornshøj H, Hess JM, Juul RIstrup, Lin Z et al..  2020.  Analyses of non-coding somatic drivers in 2,658 cancer whole genomes.. Nature. 578(7793):102-111.
Rajarajan S, Snijesh VP, Anupama CE, Nair MG, Mavatkar AD, Naidu CM, Patil S, Nimbalkar VP, Alexander A, Pillai M et al..  2023.  An androgen receptor regulated gene score is associated with epithelial to mesenchymal transition features in triple negative breast cancers.. Transl Oncol. 37:101761.
Singh AKumar, Walavalkar K, Tavernari D, Ciriello G, Notani D, Sabarinathan R.  2023.  Cis-regulatory effect of HPV integration is constrained by host chromatin architecture in cervical cancers.. Mol Oncol.
Gupta A, Sabarinathan R, Bala P, Donipadi V, Vashisht D, Katika MRao, Kandakatla M, Mitra D, Dalal A, Bashyam MDharan.  2021.  A comprehensive profile of genomic variations in the SARS-CoV-2 isolates from the state of Telangana, India.. J Gen Virol.
Dhaka B, Sabarinathan R.  2021.  Differential chromatin accessibility landscape of gain-of-function mutant p53 tumours.. BMC Cancer. 21(1):669.
Jeong H, Grimes K, Rauwolf KK, Bruch P-M, Rausch T, Hasenfeld P, Benito E, Roider T, Sabarinathan R, Porubsky D et al..  2023.  Functional analysis of structural variants in single cells using Strand-seq.. Nat Biotechnol. 41:832-844.
Gonzalez-Perez A, Sabarinathan R, Lopez-Bigas N.  2019.  Local Determinants of the Mutational Landscape of the Human Genome.. Cell. 177(1):101-114.
Sabarinathan R, Anthon C, Gorodkin J, Seemann SE.  2018.  Multiple Sequence Alignments Enhance Boundary Definition of RNA Structures.. Genes (Basel). 9(12)
Kumar R, Dhaka B, Sahoo S, Jolly MKumar, Sabarinathan R.  2023.  Prognostic association of immunoproteasome expression in solid tumours is governed by the immediate immune environment.. Mol Oncol.
Walavalkar K, Saravanan B, Singh AKumar, Jayani RSingh, Nair A, Farooq U, Islam Z, Soota D, Mann R, Shivaprasad PV et al..  2020.  A rare variant of African ancestry activates 8q24 lncRNA hub by modulating cancer associated enhancer.. Nat Commun. 11(1):3598.
Alexandrov LB, Kim J, Haradhvala NJ, Huang MNi, Ng AWei Tian, Wu Y, Boot A, Covington KR, Gordenin DA, Bergstrom EN et al..  2020.  The repertoire of mutational signatures in human cancer. Nature. 578(7793):94-101.
Khot M, Sreekumar D, Jahagirdar S, Kulkarni A, Hari K, Faseela EEbrahimkut, Sabarinathan R, Jolly MKumar, Sengupta K.  2020.  Twist1 induces chromosomal instability (CIN) in colorectal cancer cells.. Hum Mol Genet. 29(10):1673-1688.