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Harshith CY, Pal A, Chakraborty M, Nair A, Raju S, Shivaprasad PV.  2024.  Wound-induced small-peptide-mediated signaling cascade, regulated by OsPSKR, dictates balance between growth and defense in rice.. Cell Rep. 43(7):114515.
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Pachamuthu K, Swetha C, Basu D, Das S, Singh I, Sundar VHari, Sujith TN, Shivaprasad PV.  2021.  Rice-specific Argonaute 17 controls reproductive growth and yield-associated phenotypes.. Plant Mol Biol. 105(1-2):99-114.
Walavalkar K, Saravanan B, Singh AKumar, Jayani RSingh, Nair A, Farooq U, Islam Z, Soota D, Mann R, Shivaprasad PV et al..  2020.  A rare variant of African ancestry activates 8q24 lncRNA hub by modulating cancer associated enhancer.. Nat Commun. 11(1):3598.
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Pachamuthu K, Sundar VHari, Narjala A, Singh RR, Das S, Pal HCYAvik, Shivaprasad PV.  2022.  Nitrate-dependent regulation of miR444-OsMADS27 signaling cascade controls root development in rice.. J Exp Bot.
Shivaprasad PV.  2019.  New clues into the mechanisms of rice domestication.. J Biosci. 44(2)
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Swetha C, Basu D, Pachamuthu K, Tirumalai V, Nair A, Prasad M, Shivaprasad PV.  2018.  Major domestication-related phenotypes in indica rice are due to loss of miRNA-mediated laccase silencing.. Plant Cell.
E
Jha V, Narjala A, Basu D, Sujith TN, Pachamuthu K, Chenna S, Nair A, Shivaprasad PV.  2021.  Essential role of γ-clade RNA-dependent RNA polymerases in rice development and yield-related traits is linked to their atypical polymerase activities regulating specific genomic regions.. New Phytol.
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Prasad M, Kataria P, Ningaraju S, Buddidathi R, Bankapalli K, Swetha C, Susarla G, Venkatesan R, D'Silva P, Shivaprasad PV.  2022.  Double DJ-1 domain containing Arabidopsis DJ-1D is a robust macromolecule deglycase.. New Phytol.
Jagtap S, Shivaprasad PV.  2014.  Diversity, expression and mRNA targeting abilities of Argonaute-targeting miRNAs among selected vascular plants.. BMC Genomics. 15(1):1049.
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Jaganathan D, Rajakani R, Doddamani D, Saravanan D, Pulipati S, G VHari Sunda, Sellamuthu G, Jayabalan S, Kumari K, Parthasarathy P et al..  2023.  A conserved SNP variation in the pre-miR396c flanking region in Oryza sativa indica landraces correlates with mature miRNA abundance.. Sci Rep. 13(1):2195.
Narjala A, Nair A, Tirumalai V, G Sundar VHari, Shivaprasad PV.  2020.  A conserved sequence signature is essential for robust plant miRNA biogenesis.. Nucleic Acids Res.
B
Shivaprasad PV, Hohn T, Akbergenov R.  2015.  Biochemical requirements for two Dicer-like activities from wheat germ.. PLoS One. 10(1):e0116736.
Nair A, Harshith CY, Narjala A, Shivaprasad PV.  2023.  Begomoviral βC1 orchestrates organellar genomic instability to augment viral infection.. Plant J.