Author [ Title] Type Year
Honda A, Kita T, Seshadri SVidhya, Misaki K, Ahmed Z, Ladbury JE, Richardson GP, Yonemura S, Ladher RK. 2018. FGFR1-mediated protocadherin-15 loading mediates cargo specificity during intraflagellar transport in inner ear hair-cell kinocilia.. Proc Natl Acad Sci U S A. 115(33):8388-8393.
Thimmegowda GG, Mullen S, Sottilare K, Sharma A, Mohanta SSoham, Brockmann A, Dhandapany PS, Olsson SB. 2020. A field-based quantitative analysis of sublethal effects of air pollution on pollinators.. Proc Natl Acad Sci U S A.
Dovih P, Laing ED, Chen Y, Low DHW, Ansil BR, Yang X, Shi Z, Broder CC, Smith GJD, Linster M et al.. 2019. Filovirus-reactive antibodies in humans and bats in Northeast India imply zoonotic spillover.. PLoS Negl Trop Dis. 13(10):e0007733.
Viswan NA, HarshaRani GVani, Stefan MI, Bhalla US. 2018. FindSim: A Framework for Integrating Neuronal Data and Signaling Models.. Front Neuroinform. 12:38.
Sriramamurthy R.T., Bhalla R.S, Sankaran M. 2020. Fire differentially affects mortality and seedling regeneration of three woody invaders in forest-grassland mosaics of the southern Western Ghats, India. BIOLOGICAL INVASIONS.
Mirza ZA, Gowande GG, Patil R, Ambekar M, Patel H. 2018. First appearance deceives many: disentangling the species complex using an integrated approach.. PeerJ. 6:e5341.
Caleb JTD, Sanap R.V., Patel KG, Sudhikumar AV. 2018. First description of the female of Chrysilla volupe (Karsch, 1879) (Araneae: Salticidae: Chrysillini) from India, with notes on the species’ distribution and life history. Arthropoda Selecta. 27(2):143-153.
Deshpande K., Gangal M, Kelkar N. 2016. First record of a bat from the Lakshadweep archipelago, southwestern India. Mammalia. 80(2):223-225.
Jumani S, Rao S, Kelkar N. 2018. Fish community responses to stream flow alterations and habitat modifications by small hydropower projects in the Western Ghats biodiversity hotspot, India. Aquatic Conservation: Marine and Freshwater Ecosystems. 28(4):9792-993.
Nandwani N, Surana P, Negi H, Mascarenhas NM, Udgaonkar JB, Das R, Gosavi S. 2019. A five-residue motif for the design of domain swapping in proteins.. Nat Commun. 10(1):452.
Liu P, Sane SP, Mongeau J-M, Zhao J, Cheng B. 2019. Flies land upside down on a ceiling using rapid visually mediated rotational maneuvers.. Sci Adv. 5(10):eaax1877.
Jain A., Kunte K, Webb E.L.. 2016. Flower specialization of butterflies and impacts of non-native flower use in a transformed tropical landscape. Biological Conservation. 201:84–191.
Thutupalli S, Geyer D, Singh R, Adhikari R, Stone HA. 2018. Flow-induced phase separation of active particles is controlled by boundary conditions.. Proc Natl Acad Sci U S A.
Roy S, Mathew MK. 2018. Fluid flow modulates electrical activity in cardiac hERG potassium channels.. J Biol Chem.
Tripathi V, Das R. 2020. A Fluorescence-Based Assay to Monitor SUMOylation in Real-Time.. Curr Protoc Protein Sci. 101(1):e111.
Ravi P, Trivedi D, Hasan G. 2018. FMRFa receptor stimulated Ca2+ signals alter the activity of flight modulating central dopaminergic neurons in Drosophila melanogaster.. PLoS Genet. 14(8):e1007459.
D'Souza MNinochka, Gowda NKumar Chan, Tiwari V, Babu ROttakandat, Anand P, Dastidar SGhosh, Singh R, Selvaraja B, Pal R, Ramesh A et al.. 2018. FMRP Interacts with C/D Box snoRNA in the Nucleus and Regulates Ribosomal RNA Methylation.. iScience. 9:399-411.
Rao VVHemanth, Gosavi S. 2018. On the folding of a structurally complex protein to its metastable active state.. Proc Natl Acad Sci U S A.
Patankar V, D'Souza E, Alcoverro T, Arthur R. 2016. For traditional island communities in the Nicobar archipelago, complete no-go areas are the most effective form of marine management . OCEAN & COASTAL MANAGEMENT . 133:53-63.
Kumar R, Shahabuddin G, Kumar A. 2020. Foraging niche differentiation among sympatric woodpecker species in forests of north-western India. ACTA ORNITHOLOGICA. 55(1):88-100.
Zambre AM, Arthur R. 2018. Foraging plasticity in obligate corallivorous Melon butterflyfish across three recently bleached reefs . ETHOLOGY. 124 (5):302-310.
Gopal A, Mudappa D, Raman TRS, Naniwadekar R. 2020. Forest cover and fruit crop size differentially influence frugivory of select rainforest tree species in Western Ghats, India. BIOTROPICA.
Joshi AA, Sankaran M, Ratnam J. 2018. ‘Foresting’ the grassland: Historical management legacies in forest-grassland mosaics in southern India, and lessons for the conservation of tropical grassy biomes. Biological Conservation. 224:144-152.
Hasan G. 2019. Formal structures of mentorship in universities and research institutions will benefit both science and scientists. Current Science. 116(10):1615-1616.
Milán-Garcés EA, Thaore P, Udgaonkar JB, Puranik M. 2015. Formation of a CH-π contact in the core of native barstar during folding.. J Phys Chem B. 119(7):2928-32.
Diwan GD, Agashe D. 2016. The Frequency of Internal Shine-Dalgarno-like Motifs in Prokaryotes.. Genome Biol Evol. 8(6):1722-33.
Chaturvedi D, VijayRaghavan K. 2019. From a syncytium to mononucleate cells and back: Yki and JNK in symphony.. J Cell Biol.
Joshi AA, Ratnam J, Sankaran M. 2019. Frost maintains forests and grasslands as alternate states in a montane tropical forest–grassland mosaic; but alien tree invasion and warming can disrupt this balance. JOURNAL OF ECOLOGY.
Joshi AA, Ratnam J, Sankaran M. 2020. Frost maintains forests and grasslands as alternate states in a montane tropical forest-grassland mosaic; but alien tree invasion and warming can disrupt this balance. JOURNAL OF ECOLOGY. 108(1):122-132.
Farheen N, Thattai M. 2019. Frustration and fidelity in influenza genome assembly.. J R Soc Interface. 16(160):20190411.
Batra S, Corcoran J, Zhang D-D, Pal P, P UK, Kulkarni R, Löfstedt C, Sowdhamini R, Olsson SB. 2019. A Functional Agonist of Insect Olfactory Receptors: Behavior, Physiology and Structure.. Front Cell Neurosci. 13:134.
Panda A, Thakur R, Krishnan H, Naik A, Shinde D, Raghu P. 2018. Functional analysis of mammalian phospholipase D enzymes.. Biosci Rep.
Mathre S, Reddy B, Ramya V, Krishnan H, Ghosh A, Raghu P. 2019. Functional analysis of the biochemical activity of mammalian phosphatidylinositol 5 phosphate 4-kinase enzymes.. Biosci Rep.
Dwivedi V, Rao S, Bomzan DPedenla, Kumar SRajeev, Shanmugam PV, Olsson SB, Nagegowda DA. 2021. Functional characterization of a defense-responsive bulnesol/elemol synthase from potato.. Physiol Plant. 171(1):7-21.
G KP, Kuruvilla S, Mathew MK. 2015. Functional characterization of a transition metal ion transporter, OsZIP6 from rice (Oryza sativa L.).. Plant Physiol Biochem. 97:165-74.
Raghu P. 2020. Functional diversity in a lipidome.. Proc Natl Acad Sci U S A. 117(21):11191-11193.
Ratnam J, Chengappa SK, Machado S, Nataraj N, Osuri AM, Sankaran M. 2019. Functional Traits of Trees From Dry Deciduous “Forests” of Southern India Suggest Seasonal Drought and Fire Are Important Drivers. Front. Ecol. Evol..
Yadahalli S, Gosavi S. 2016. Functionally Relevant Specific Packing Can Determine Protein Folding Routes.. J Mol Biol. 428(2 Pt B):509-21.
Sabareesan AThody, Udgaonkar JB. 2017. The G126V Mutation in the Mouse Prion Protein Hinders Nucleation-Dependent Fibril Formation by Slowing Initial Fibril Growth and by Increasing the Critical Concentration.. Biochemistry. 56(44):5931-5942.
Gowda SBM, Paranjpe PD, O Reddy V, Thiagarajan D, Palliyil S, Reichert H, VijayRaghavan K. 2018. GABAergic inhibition of leg motoneurons is required for normal walking behavior in freely moving.. Proc Natl Acad Sci U S A.
Agarwal I, Thackeray T, Khandekar A. 2020. Geckos in the granite: two new geckos (Squamata: Gekkonidae) from rocky, scrub habitats in Rishi Valley, Andhra Pradesh, India. ZOOTAXA. 4838(4):451-474.
Iyer MS, Bhargava K, Pavalam M, Sowdhamini R. 2019. GenDiS database update with improved approach and features to recognize homologous sequences of protein domain superfamilies.. Database (Oxford). 2019
Mullin AP, Sadanandappa MK, Ma W, Dickman DK, VijayRaghavan K, Ramaswami M, Sanyal S, Faundez V. 2015. Gene dosage in the dysbindin schizophrenia susceptibility network differentially affect synaptic function and plasticity.. J Neurosci. 35(1):325-38.
Solari KA, Ramakrishnan U, Hadly EA. 2018. Gene expression is implicated in the ability of pikas to occupy Himalayan elevational gradient.. PLoS One. 13(12):e0207936.
Houot B, Cazalé-Debat L, Fraichard S, Everaerts C, Saxena N, Sane SP, Ferveur J-F. 2018. Gene regulation and species-specific evolution of free-flight odor-tracking in Drosophila.. Mol Biol Evol. 35(1):3-15.
Hautier Y, Zhang P, Loreau M, Wilcox KR, Seabloom EW, Borer ET, Byrnes JEK, Koerner SE, Komatsu KJ, Lefcheck JS et al.. 2020. General destabilizing effects of eutrophication on grassland productivity at multiple spatial scales.. Nat Commun. 11(1):5375.
Parveen S, Panicker MM, Gupta PKumar. 2017. Generation of an induced pluripotent stem cell line from chorionic villi of a Turner syndrome spontaneous abortion.. Stem Cell Res. 19:12-16.
Baral S, Arumugam G, Deshmukh R, Kunte K. 2019. Genetic architecture and sex-specific selection govern modular, male-biased evolution of .. Sci Adv. 5(5):eaau3753.
Hoban S, Bruford M, Jackson JD, Lopes-Fernandes M, , Ramakrishnan U, al et. 2020. Genetic diversity targets and indicators in the CBD post-2020 Global Biodiversity Framework must be improved. BIOLOGICAL CONSERVATION. 248
Janardan V, Sharma S, Basu U, Raghu P. 2020. A Genetic Screen in Drosophila To Identify Novel Regulation of Cell Growth by Phosphoinositide Signaling.. G3 (Bethesda). 10(1):57-67.
Patel RP, Wutke S, Lenz D, Mukherjee S, Ramakrishnan U, Veron G, Fickel J, Wilting A, Förster DW. 2017. Genetic Structure and Phylogeography of the Leopard Cat (Prionailurus bengalensis) Inferred from Mitochondrial Genomes.. J Hered. 108(4):349-360.
Kesarwani S, Lama P, Chandra A, P Reddy P, Jijumon AS, Bodakuntla S, Rao BM, Janke C, Das R, Sirajuddin M. 2020. Genetically encoded live-cell sensor for tyrosinated microtubules.. J Cell Biol. 219(10)
Dahal N, Lissovsky AA, Lin Z, Solari K, Hadly EA, Zhan X, Ramakrishnan U. 2017. Genetics, morphology and ecology reveal a cryptic pika lineage in the Sikkim Himalaya.. Mol Phylogenet Evol. 106:55-60.
Trivedi D, Cm V, Bisht K, Janardan V, Pandit A, Basak B, H S, Ramesh N, Raghu P. 2020. A genome engineering resource to uncover principles of cellular organization and tissue architecture by lipid signalling.. Elife. 9
Lal A, Dhar A, Trostel A, Kouzine F, Seshasayee ASN, Adhya S. 2016. Genome scale patterns of supercoiling in a bacterial chromosome.. Nat Commun. 7:11055.
Upadhyay AK, Chacko AR, Gandhimathi A, Ghosh P, Harini K, Joseph AP, Joshi AG, Karpe SD, Kaushik S, Kuravadi N et al.. 2015. Genome sequencing of herb Tulsi (Ocimum tenuiflorum) unravels key genes behind its strong medicinal properties.. BMC Plant Biol. 15:212.
Srinivasan R, Scolari VFerdinando, Lagomarsino MCosentino, Seshasayee ASai Narain. 2015. The genome-scale interplay amongst xenogene silencing, stress response and chromosome architecture in Escherichia coli.. Nucleic Acids Res. 43(1):295-308.
Srinivasan R, Walvekar AS, Rashida Z, Seshasayee A, Laxman S. 2020. Genome-scale reconstruction of Gcn4/ATF4 networks driving a growth program. PLoS Genet. 16(12):e1009252.
Upadhyay AKumar, Sowdhamini R. 2019. Genome-Wide Analysis of Domain-Swap Predicted Products in the Genome of Anti-Stress Medicinal Plant: .. Bioinform Biol Insights. 13:1177932218821362.
Lakshmanan V, Bansal D, Kulkarni J, Poduval D, Krishna S, Sasidharan V, Anand P, Seshasayee A, Palakodeti D. 2016. Genome-Wide Analysis of Polyadenylation Events in Schmidtea mediterranea.. G3 (Bethesda). 6(10):3035-3048.
Chattopadhyay B, Garg KM, Kumar AKVinoth, D Doss PSwami, Rheindt FE, Kandula S, Ramakrishnan U. 2016. Genome-wide data reveal cryptic diversity and genetic introgression in an Oriental cynopterine fruit bat radiation.. BMC Evol Biol. 16:41.
Chib S, Ali F, Seshasayee ASai Narain. 2017. Genomewide Mutational Diversity in Escherichia coli Population Evolving in Prolonged Stationary Phase.. mSphere. 2(3)
Upadhyay AKumar, Sowdhamini R. 2016. Genome-Wide Prediction and Analysis of 3D-Domain Swapped Proteins in the Human Genome from Sequence Information.. PLoS One. 11(7):e0159627.
Sarov M, Barz C, Jambor H, Hein MY, Schmied C, Suchold D, Stender B, Janosch S, Kj VVikas, Krishnan RT et al.. 2016. A genome-wide resource for the analysis of protein localisation in Drosophila.. Elife. 5
Bhattacharyya T, Sowdhamini R. 2019. Genome-Wide Search for Tyrosine Phosphatases in the Human Genome Through Computational Approaches Leads to the Discovery of Few New Domain Architectures.. Evol Bioinform Online. 15:1176934319840289.
Rao RM, Pasha SNaseer, Sowdhamini R. 2016. Genome-wide survey and phylogeny of S-Ribosylhomocysteinase (LuxS) enzyme in bacterial genomes.. BMC Genomics. 17(1):742.
Ghosh P, Sowdhamini R. 2016. Genome-wide survey of putative RNA-binding proteins encoded in the human proteome.. Mol Biosyst. 12(2):532-40.
Iyer MS, Joshi AG, Sowdhamini R. 2018. Genome-wide survey of remote homologues for protein domain superfamilies of known structure reveals unequal distribution across structural classes.. Mol Omics.
Hsu JL, Crawford JChase, Tammone MN, Ramakrishnan U, Lacey EA, Hadly EA. 2017. Genomic data reveal a loss of diversity in two species of tuco-tucos (genus Ctenomys) following a volcanic eruption.. Sci Rep. 7(1):16227.
Bangalore MPrakash, Adhikarla S, Mukherjee O, Panicker MM. 2017. Genotoxic Effects of Culture Media on Human Pluripotent Stem Cells.. Sci Rep. 7:42222.
Gupta P, Vishnudas CK, Ramakrishnan U, Robin VV, Dharmarajan G. 2019. Geographical and host species barriers differentially affect generalist and specialist parasite community structure in a tropical sky-island archipelago.. Proc Biol Sci. 286(1904):20190439.
Kitnya N, Prabhudev MV, Bhatta CPrasad, Pham THong, Nidup T, Megu K, Chakravorty J, Brockmann A, Otis GW. 2020. Geographical distribution of the giant honey bee Smith, 1871 (Hymenoptera, Apidae).. Zookeys. 951:67-81.
Dhingra S, Sowdhamini R, Cadet F, Offmann B. 2020. A glance into the evolution of template-free protein structure prediction methodologies.. Biochimie. 175:85-92.
Mandal R, Bhuyan PJyoti, Chaudhuri P, Rao M, Dasgupta C. 2017. Glassy swirls of active dumbbells.. Phys Rev E. 96(4-1):042605.
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Gupta T, Kumar A, Cattenoz PB, VijayRaghavan K, Giangrande A. 2016. The Glide/Gcm fate determinant controls initiation of collective cell migration by regulating Frazzled.. Elife. 5
Badrinarayanan A, Le TBK, Spille J-H, Cisse II, Laub MT. 2017. Global analysis of double-strand break processing reveals in vivo properties of the helicase-nuclease complex AddAB.. PLoS Genet. 13(5):e1006783.
Samhita L, Raval PK, Agashe D. 2020. Global mistranslation increases cell survival under stress in Escherichia coli.. PLoS Genet. 16(3):e1008654.
Chodankar A, Sadanandappa MK, VijayRaghavan K, Ramaswami M. 2020. GLOMERULUS-SELECTIVE REGULATION OF A CRITICAL PERIOD FOR INTERNEURON PLASTICITY IN THE ANTENNAL LOBE.. J Neurosci.
Neelamraju S, Wales DJ, Gosavi S. 2019. Go-Kit: A Tool To Enable Energy Landscape Exploration of Proteins.. J Chem Inf Model.
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Saha S, Anilkumar AAmbika, Mayor S. 2016. GPI-anchored protein organization and dynamics at the cell surface.. J Lipid Res. 57(2):159-75.
Narayan A, Campos LA, Bhatia S, Fushman D, Naganathan AN. 2017. Graded Structural Polymorphism in a Bacterial Thermosensor Protein.. J Am Chem Soc. 139(2):792-802.
Agarwal I, Thackeray T, Pal S, Khandekar A. 2020. Granite boulders act as deep-time climate refugia: A Miocene divergent clade of rupicolous Cnemaspis Strauch, 1887 (Squamata: Gekkonidae) from the Mysore Plateau, India, with descriptions of three new species. JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH.
Wigley BJ, Augustine DJ, Coetsee C, Ratnam J, Sankaran M. 2020. Grasses continue to trump trees at soil carbon sequestration following herbivore exclusion in a semi-arid African savanna.. Ecology. :e03008.
Kohli M, Mijiddorj TNadia, Suryawanshi KRamesh, Mishra C, Boldgiv B, Sankaran M. 2020. Grazing and climate change have site-dependent interactive effects on vegetation in Asian montane rangelands. JOURNAL OF APPLIED ECOLOGY.
Dinesh AS, Mathur V, Ansil BR, Chandru V, Chellam R, Vanak ATamim, Ramakrishnan U, Rajagopal P. 2020. Health Heatmap of India: An Open Data Platform.. J Indian Inst Sci. :1-16.
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Sachdeva K, Goel M, Sundaramurthy V. 2020. Heterogeneity in the endocytic capacity of individual macrophage in a population determines its subsequent phagocytosis, infectivity and subcellular trafficking.. Traffic. 21(8):522-533.
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Nair AG, Castro LRV, Khoury MEl, Gorgievski V, Giros B, Tzavara ET, Hellgren-Kotaleski J, Vincent P. 2019. The high efficacy of muscarinic M4 receptor in D1 medium spiny neurons reverses striatal hyperdopaminergia.. Neuropharmacology. 146:74-83.
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Agarwal I, Khandekar A, Giri VB, Ramakrishnan U, Karanth P. 2019. The hills are alive with geckos! A radiation of a dozen species on sky islands across peninsular India (Squamata: Gekkonidae, Hemiphyllodactylus) with the description of three new species. Organisms Diversity & Evolution. 19(2):341–361.
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Varghese PC, Rajam SM, Nandy D, Jory A, Mukherjee A, Dutta D. 2021. Histone chaperone APLF level dictate implantation of mouse embryo. J Cell Sci. 134(1)