Author Title [ Type(Desc)] Year
Journal Article
Khandekar A, Gaitonde N, Agarwal I.  2019.  Two new Cnemaspis Strauch, 1887 (Squamata: Gekkonidae) from the Shevaroy massif, Tamil Nadu, India, with a preliminary ND2 phylogeny of Indian Cnemaspis.. Zootaxa. 4609(1):zootaxa.4609.1.3.
Robin VV, Vishnudas CK, Gupta P, Rheindt FE, Hooper DM, Ramakrishnan U, Reddy S.  2017.  Two new genera of songbirds represent endemic radiations from the Shola Sky Islands of the Western Ghats, India.. BMC Evol Biol. 17(1):31.
Agarwal I, Mahony S, Giri VB, Chaitanya R, Bauer AM.  2018.  Two new species of bent toed geckos, Cyrtodactylus Gray, 1827 (Squamata: Gekkonidae) from Northeast India with comments on name-bearing types from the region . ZOOTAXA. 4420 (3):334-356.
Sanap RV, Joglekar A, Prajapati D, Caleb JTD.  2017.  Two new species of Langelurillus Próchniewicz, 1994 from India (Araneae: Salticidae: Aelurillina). Zootaxa. 4318(1):135-146.
Agarwal I, Khandekar A, Ramakrishnan U, Vyas R, Giri VB.  2018.  Two new species of the Ophisops microlepis (Squamata: Lacertidae) complex from northwestern India with a key to Indian Ophisops . JOURNAL OF NATURAL HISTORY . 52(13-16):819-847.
Holla H, Sharma A, Bhat P, Shinde D, Das B.  2017.  Two new substituted polychiral 5, 6-dihydro-alpha-pyrones from Orthosiphon diffusus and molecular docking studies. PHYTOCHEMISTRY LETTERS. 22:21-26.
Kunte K, Basu DNath.  2024.  Two new taxa of brush-footed butterflies (Lepidoptera: Nymphalidae) from the Western Ghats biodiversity hotspot, southern India.. Zootaxa. 5543(3):343-367.
Dhanya SKumari, Hasan G.  2022.  Two photon imaging of calcium responses in murine Purkinje neurons.. STAR Protoc. 3(1):101105.
Singh A, Soler JAntoni, Lauer J, Grill SW, Jahnel M, Zerial M, Thutupalli S.  2023.  Two-component molecular motor driven by a GTPase cycle. NATURE PHYSICS.
Thamm M, Wagler K, Brockmann A, Scheiner R.  2021.  Tyramine 1 Receptor Distribution in the Brain of Corbiculate Bees Points to a Conserved Function.. Brain Behav Evol. :1-13.
Ser-Giacomi E, Zinger L, Malviya S, de Vargas C, Karsenti E, Bowler C, De Monte S.  2018.  Ubiquitous abundance distribution of non-dominant plankton across the global ocean.. Nat Ecol Evol.
Garcia-Parajo MF, Mayor S.  2024.  The ubiquitous nanocluster: A molecular scale organizing principle that governs cellular information flow.. Curr Opin Cell Biol. 86:102285.
Adhikari S, Singh V, Nandi S, Ghosal M, Raj NSundar, Khanna J, Bhattacharya A, Kabiraj A, Mondal A, Vasudevan M et al..  2024.  UBR7 in concert with EZH2 inhibits the TGF-β signaling leading to extracellular matrix remodeling.. Cell Rep. 43(7):114394.
Kulkarni SS, Sabharwal V., Sheoran S., Basu A., Matsumoto K., Hisamoto N., Ghosh-Roy A., Koushika SP.  2021.  UNC-16 alters DLK-1 localization and negatively regulates actin and microtubule dynamics in Caenorhabditis elegans regenerating neurons. Genetics. 219(3):iyab139.
Sure GReddy, Chatterjee A, Mishra N, Sabharwal V, Devireddy S, Awasthi A, Mohan S, Koushika SP.  2018.  UNC-16/JIP3 and UNC-76/FEZ1 limit the density of mitochondria in C. elegans neurons by maintaining the balance of anterograde and retrograde mitochondrial transport.. Sci Rep. 8(1):8938.
Choudhary B, Kamak M, Ratnakaran N, Kumar J, Awasthi A, Li C, Nguyen K, Matsumoto K, Hisamoto N, Koushika SP.  2017.  UNC-16/JIP3 regulates early events in synaptic vesicle protein trafficking via LRK-1/LRRK2 and AP complexes.. PLoS Genet. 13(11):e1007100.
Viswan NAnn, Bhalla USingh.  2023.  Understanding molecular signaling cascades in neural disease using multi-resolution models.. Curr Opin Neurobiol. 83:102808.
Mascarenhas NManuel, Gosavi S.  2017.  Understanding protein domain-swapping using structure-based models of protein folding.. Prog Biophys Mol Biol. 128:113-120.
Lalwani DP, Gosavi S.  2021.  Understanding the Folding Mediated Assembly of the Bacteriophage MS2 Coat Protein Dimers.. J Phys Chem B.
Chakraborty S, Singh P, Seshasayee ASai Narain.  2022.  Understanding the Genome-Wide Transcription Response To Various cAMP Levels in Bacteria Using Phenomenological Models.. mSystems. :e0090022.
Willaert B, Suyesh R, Garg S, Giri VB, Bee MA, Biju SD.  2016.  A unique mating strategy without physical contact during fertilization in Bombay Night Frogs (Nyctibatrachus humayuni) with the description of a new form of amplexus and female call.. PeerJ. 4:e2117.
Kottur J, Sharma A, Gore KR, Narayanan N, Samanta B, Pradeepkumar PI, Nair DT.  2015.  Unique structural features in DNA polymerase IV enable efficient bypass of the N2 adduct induced by the nitrofurazone antibiotic.. Structure. 23(1):56-67.
Das SG, Rao M, Iyengar G.  2017.  Universal lower bound on the free-energy cost of molecular measurements.. Phys Rev E. 95(6-1):062410.
Thattai M.  2016.  Universal Poisson Statistics of mRNAs with Complex Decay Pathways.. Biophys J. 110(2):301-5.
Banerjee JPrasad, Mandal R, Banerjee DSankar, Thutupalli S, Rao M.  2022.  Unjamming and emergent nonreciprocity in active ploughing through a compressible viscoelastic fluid.. Nat Commun. 13(1):4533.
D'Souza F, Pudakalakatti SM, Uppangala S, Honguntikar S, Salian SRaj, Kalthur G, Pasricha R, Appajigowda D, Atreya HS, Adiga SKumar.  2016.  Unraveling the association between genetic integrity and metabolic activity in pre-implantation stage embryos.. Sci Rep. 6:37291.
Armstrong EE, Mooney JA, Solari KA, Kim BY, Barsh GS, Grant VB, Greenbaum G, Kaelin CB, Panchenko K, Pickrell JK et al..  2024.  Unraveling the genomic diversity and admixture history of captive tigers in the United States.. Proc Natl Acad Sci U S A. 121(39):e2402924121.
Singh J, Udgaonkar JB.  2016.  Unraveling the Molecular Mechanism of pH-Induced Misfolding and Oligomerization of the Prion Protein.. J Mol Biol. 428(6):1345-55.
Hilgen G, Sorbaro M, Pirmoradian S, Muthmann J-O, Kepiro IEdit, Ullo S, Ramirez CJuarez, Encinas APuente, Maccione A, Berdondini L et al..  2017.  Unsupervised Spike Sorting for Large-Scale, High-Density Multielectrode Arrays.. Cell Rep. 18(10):2521-2532.
Nandavaram A, Nandakumar A, Kashif GM, Sagar ALakshman, Shailaja G, Ramesh A, Siddavattam D.  2023.  Unusual Relationship between Iron Deprivation and Organophosphate Hydrolase Expression.. Appl Environ Microbiol. :e0190322.
Chatterjee KSankar, Das R.  2021.  An 'up' oriented methionine-aromatic structural motif in SUMO is critical for its stability and activity.. J Biol Chem. :100970.
Pal AKumar, Gandhivel VHari-Sunda, Nambiar AB, Shivaprasad PV.  2024.  Upstream regulator of genomic imprinting in rice endosperm is a small RNA-associated chromatin remodeler.. Nat Commun. 15(1):7807.
Joseph AP, Swapna LS, Rakesh R, Srinivasan N.  2016.  Use of evolutionary information in the fitting of atomic level protein models in low resolution cryo-EM map of a protein assembly improves the accuracy of the fitting.. J Struct Biol.
Trivedi D.  2021.  Using CRISPR-Cas9-based genome engineering tools in Drosophila melanogaster.. Prog Mol Biol Transl Sci. 180:85-121.
Sanyal A, Agarwal S, Ramakrishnan U, Garg KM, Chattopadhyay B.  2022.  Using Environmental Sampling to Enable Zoonotic Pandemic Preparedness.. J Indian Inst Sci. :1-20.
Saltzberg DJ, Viswanath S, Echeverria I, Chemmama IE, Webb B, Sali A.  2021.  Using Integrative Modeling Platform to Compute, Validate, and Archive a Model of a Protein Complex Structure.. Protein Sci. 30(1):250-261.
Sreedharan V, Bhalla US, Ramakrishnan N.  2023.  Using sensitivity analyses to understand bistable system behavior.. BMC Bioinformatics. 24(1):136.
Chib S, Das S, Venkatesan S, Seshasayee ASN, Thattai M.  2018.  Using stochastic cell division and death to probe minimal units of cellular replication. New Journal of Physics. 20(035004)
Chib S, Das S, Venkatesan S, Seshasayee ASai Narain, Thattai M.  2018.  Using stochastic cell division and death to probe minimal units of cellular replication.. New J Phys. 20(3):035004.
Rao VHemanth Gi, Gosavi S.  2016.  Using the folding landscapes of proteins to understand protein function.. Curr Opin Struct Biol. 36:67-74.
Kaushik PKumar, Olsson SB.  2020.  Using virtual worlds to understand insect navigation for bio-inspired systems.. Curr Opin Insect Sci.
Pandey RKumar, Dahiya S, Mahita J, Sowdhamini R, Prajapati VKumar.  2019.  Vaccination and immunization strategies to design Aedes aegypti salivary protein based subunit vaccine tackling Flavivirus infection.. Int J Biol Macromol. 122:1203-1211.
Ansil BR, George CElizabeth, Chandrasingh S, Viswanathan A, Thattai M, Raghu P, Devadiga S, Harikumar AGeetha, Harsha PKandi, Nair I et al..  2023.  Validating saliva as a biological sample for cost-effective, rapid and routine screening for SARS-CoV-2. INDIAN JOURNAL OF MEDICAL MICROBIOLOGY. 45(100384)
Frigola J, Sabarinathan R, Gonzalez-Perez A, Lopez-Bigas N.  2021.  Variable interplay of UV-induced DNA damage and repair at transcription factor binding sites. Nucleic Acids Res. 49(2):891-901.
Garg KM, Ramakrishnan U.  2017.  Variance in Female Reproductive Success Differentially Impacts Effective Population Size in the Short-Nosed Fruit Bat, Cynopterus sphinx. Evolutionary Biology. 44(3):3066-373.
Banerjee JP, Das JK, Choudhury PP, Mukherjee S, Hassan SS, Basu P.  2020.  The Variations of Human miRNAs and Ising Like Base Pairing Models. MATCH-COMMUNICATIONS IN MATHEMATICAL AND IN COMPUTER CHEMISTRY. 83(3):357-372.
Surendra A, Osuri A.M, Ratnam J.  2021.  Varying impacts of logging frequency on tree communities and carbon storage across evergreen and deciduous tropical forests in the Andaman Islands, India. FOREST ECOLOGY AND MANAGEMENT. (118791)
Mukherjee S, Shelar B, Krishna S.  2022.  Versatile role of miR-24/24-1*/24-2*expression in cancer and other human diseases. AMERICAN JOURNAL OF TRANSLATIONAL RESEARCH . 14(1):20-54.
Baral A, Shruthi KS, Mathew MK.  2015.  Vesicular trafficking and salinity responses in plants.. IUBMB Life. 67(9):677-86.
Sane SP, Manjunath M, Mukunda CL.  2023.  Vestibular feedback for flight control in hawkmoths.. Trends Neurosci.
Rao M.  2023.  A view from the President of the Indian Biophysical Society.. Biophys Rev. 15(3):305-306.
Hembram DShiba Sank, Negi H, Biswas P, Tripathi V, Bhushan L, Shet D, Kumar V, Das R.  2020.  The Viral SUMO-Targeted Ubiquitin Ligase ICP0 is Phosphorylated and Activated by Host Kinase Chk2.. J Mol Biol. 432(7):1952-1977.
Shirke PUday, Goswami H, Kumar V, Shah D, Beri S, Das S, Bellare J, Mayor S, Venkatesh KV, Seth JR et al..  2021.  "Viscotaxis"- Directed Migration of Mesenchymal Stem Cells in Response to Loss Modulus Gradient.. Acta Biomater.
Joseph AMary, Badrinarayanan A.  2020.  Visualizing mutagenic repair: novel insights into bacterial translesion synthesis.. FEMS Microbiol Rev.
Ramachandran P, Devarajan K.  2018.  ViXeN: An open‐source package for managing multimedia data. METHODS IN ECOLOGY AND EVOLUTION . 9(3):785-792.
Rajput V, Pramanik R, Nannaware K, Malik V, Matra S, Kumar S, Joshi S, Kadam P, Bhalerao U, Tupekar M et al..  2024.  Wastewater surveillance in post-omicron silent phase uncovers silent waves and cryptic transmission of SARS-CoV-2 variants; a yearlong study in Western India.. Sci Total Environ. 955:176833.
Karkarey R, Rathod P, Arthur R, Yadav S, Theo A, Alcoverro T.  2020.  Wave exposure reduces herbivory in post-disturbed reefs by filtering species composition, abundance and behaviour of key fish herbivores.. Sci Rep. 10(1):9854.
Devereux HL, Twomey CR, Turner MS, Thutupalli S.  2021.  Whirligig beetles as corralled active Brownian particles.. J R Soc Interface. 18(177):20210114.
Rangu SSunder, Beck A, Sharda M, Mukhopadhyaya R, Seshasayee ASai Narain, Rath D.  2020.  Whole-Genome Sequencing of sp. Strain RSMS, a Highly Efficient Tributyl Phosphate-Degrading Bacterium.. Microbiol Resour Announc. 9(42)
Heilmann S, Krishna S, Kerr B.  2015.  Why do bacteria regulate public goods by quorum sensing?-How the shapes of cost and benefit functions determine the form of optimal regulation. Front Microbiol. 6:767.
Kamat A, Tran NT, Sharda M, Sontakke N, Le TBK, Badrinarayanan A.  2024.  Widespread prevalence of a methylation-dependent switch to activate an essential DNA damage response in bacteria.. PLoS Biol. 22(3):e3002540.
Balaram P.  2024.  William L. Mock and Cucurbituril: The Resurrection of the Behrend Paper of 1905.. ACS Omega. 9(4):4162-4165.
Mani S, Thattai M.  2016.  Wine glasses and hourglasses: Non-adaptive complexity of vesicle traffic in microbial eukaryotes.. Mol Biochem Parasitol.
Deora T, Sane SS, Sane SP.  2021.  Wings and halteres act as coupled dual-oscillators in flies.. Elife. 10
Stotrabhashyam S, Sharma N, Kumar A, Sinha A.  2023.  Winter foraging ecology of stump-tailed macaques in the Hollongapar Gibbon Sanctuary, Assam, India.. J Biosci. 48
Thattai M.  2024.  Wisdom of (molecular) crowds: How a snake's temperaturesensing superpower separates information from misinformation.. J Biosci. 49
Parchure A, Vyas N, Mayor S.  2018.  Wnt and Hedgehog: Secretion of Lipid-Modified Morphogens.. Trends Cell Biol. 28(2):157-170.
Diwan GD, Agashe D.  2018.  Wobbling forth and drifting back: The evolutionary history and impact of bacterial tRNA modifications.. Mol Biol Evol.
Harshith CY, Pal A, Chakraborty M, Nair A, Raju S, Shivaprasad PV.  2024.  Wound-induced small-peptide-mediated signaling cascade, regulated by OsPSKR, dictates balance between growth and defense in rice.. Cell Rep. 43(7):114515.
Mak S-S, Wrabel A, Nagai H, Ladher RK, Sheng G.  2015.  Zebra finch as a developmental model.. Genesis. 53(11):669-77.
Mehra S, Ahlawat S, Kumar H, Datta D, Navalkar A, Singh N, Patel K, Gadhe L, Kadu P, Kumar R et al..  2022.  α-Synuclein aggregation intermediates form fibril polymorphs with distinct prion-like properties.. J Mol Biol. :167761.
Ray S, Singh N, Kumar R, Patel K, Pandey S, Datta D, Mahato J, Panigrahi R, Navalkar A, Mehra S et al..  2020.  α-Synuclein aggregation nucleates through liquid-liquid phase separation.. Nat Chem.
Choudhury SDey, Mushtaq Z, Reddy-Alla S, Balakrishnan SS, Thakur RS, Krishnan KS, Raghu P, Ramaswami M, Kumar V.  2016.  σ2-Adaptin Facilitates Basal Synaptic Transmission and Is Required for Regenerating Endo-Exo Cycling Pool Under High-Frequency Nerve Stimulation in Drosophila.. Genetics. 203(1):369-85.

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