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Agarwal I, Thackeray T, Khandekar A. 2022. A multitude of spots! Five new microendemic species of the Cnemaspis gracilis group (Squamata: Gekkonidae) from massifs in the Shevaroy landscape, Tamil Nadu, India. Vertebrate Zoology. 72:1137-1186.
Aghera NK, Prabha J, Tandon H, Chattopadhyay G, Vishwanath S, Srinivasan N, Varadarajan R. 2020. Mechanism of CcdA-Mediated Rejuvenation of DNA Gyrase.. Structure. 28(5):562-572.e4.
Agrawal T, Hasan G. 2015. Maturation of a central brain flight circuit in Drosophila requires Fz2/Ca²⁺ signaling.. Elife. 4
Ameta S, Kumar M, Chakraborty N, Matsubara YJ, S P, Gandavadi D, Thutupalli S. 2023. Multispecies autocatalytic RNA reaction networks in coacervates.. Communications Chemistry. 6(1):91.
Anand K, Tripathi A, Shukla K, Malhotra N, Jamithireddy AKumar, Jha RKumar, Chaudhury SNarayan, Rajmani RS, Ramesh A, Nagaraja V et al.. 2021. Mycobacterium tuberculosis SufR responds to nitric oxide via its 4Fe-4S cluster and regulates Fe-S cluster biogenesis for persistence in mice.. Redox Biol. 46:102062.
Arora R, Vats A, Chimankar V. 2019. MCV Truncated Large T antigen interacts with BRD4 in tumors. Matters.
Arora R, Rekhi B, Chandrani P, Krishna S, Dutt A. 2019. Merkel cell polyomavirus is implicated in a subset of Merkel cell carcinomas, in the Indian subcontinent.. Microb Pathog. :103778.
Arora R, Choi JEun, Harms PW, Chandrani P. 2020. Merkel Cell Polyomavirus in Merkel Cell Carcinoma: Integration Sites and Involvement of the KMT2D Tumor Suppressor Gene.. Viruses. 12(9)
Arvindekar S, Jackman MJ, Low JKK, Landsberg MJ, Mackay JP, Viswanath S. 2022. Molecular architecture of nucleosome remodeling and deacetylase sub-complexes by integrative structure determination.. Protein Sci. 31(9):e4387.
Arya D, Sachithanandan SP, Ross C, Palakodeti D, Li S, Krishna S. 2017. MiRNA182 regulates percentage of myeloid and erythroid cells in chronic myeloid leukemia.. Cell Death Dis. 8(1):e2547.
Baranov MV, Kumar M, Sacanna S, Thutupalli S, van den Bogaart G. 2021. Modulation of Immune Responses by Particle Size and Shape.. Front Immunol. 607945
Barnosky AD, Hadly EA, Gonzalez P, Head J, P Polly D, A Lawing M, Eronen JT, Ackerly DD, Alex K, Biber E et al.. 2017. Merging paleobiology with conservation biology to guide the future of terrestrial ecosystems.. Science. 355(6325)
Bhatia S, Krishnamoorthy G, Udgaonkar JB. 2021. Mapping Distinct Sequences of Structure Formation Differentiating Multiple Folding Pathways of a Small Protein.. J Am Chem Soc.
Das S, Hegde A, Shivaprasad PV. 2018. Molecular characterization of a new begomovirus infecting Synedrella nodiflora in South India.. Arch Virol.
Deora T, Gundiah N, Sane SP. 2017. Mechanics of the thorax in flies.. J Exp Biol. 220(Pt 8):1382-1395.
Deshmukh R, Baral S, Gandhimathi A, Kuwalekar M, Kunte K. 2018. Mimicry in butterflies: co-option and a bag of magnificent developmental genetic tricks.. Wiley Interdiscip Rev Dev Biol. 7(1)
Fox SJohn, Li J, Tan YSing, Nguyen MN, Pal A, Ouaray Z, Yadahalli S, Kannan S. 2016. The Multifaceted Roles of Molecular Dynamics Simulations in Drug Discovery.. Curr Pharm Des. 22(23):3585-600.
Francis B, Mathew M, Arigovindan M.. 2018. Multiresolution-based weighted regularization for denoised image interpolation from scattered samples with application to confocal microscopy . Journal of the Optical Society of America A. 35(10):1749-1759.
Gandhimathi A, Sowdhamini R. 2016. Molecular modelling of human 5-hydroxytryptamine receptor (5-HT2A) and virtual screening studies towards the identification of agonist and antagonist molecules.. J Biomol Struct Dyn. 34(5):952-70.
Gangadharan B, Sunitha MS, Mukherjee S, Chowdhury RRoy, Haque F, Sekar N, Sowdhamini R, Spudich JA, Mercer JA. 2017. Molecular mechanisms and structural features of cardiomyopathy-causing troponin T mutants in the tropomyosin overlap region.. Proc Natl Acad Sci U S A.
Garg KM, Chattopadhyay B, Doss DPSwami, Kumar AKVinoth, Kandula S, Ramakrishnan U. 2015. Males and females gain differentially from sociality in a promiscuous fruit bat Cynopterus sphinx.. PLoS One. 10(3):e0122180.
Ghosh-Harihar M, Gurung N, Shukla H, Sinha I, Pandit A, Prakash V, Green RE, Ramakrishnan U. 2020. Metabarcoding for parallel identification of species, sex and diet of obligate scavengers: an application to globally-threatened Gyps vultures. CONSERVATION GENETICS RESOURCES.
Goluguri RReddy, Udgaonkar JB. 2016. Microsecond rearrangements of hydrophobic clusters in an initially collapsed globule prime structure formation during the folding of a small protein.. J Mol Biol.
Goluguri RReddy, Sen S, Udgaonkar J. 2019. Microsecond sub-domain motions and the folding and misfolding of the mouse prion protein.. Elife. 8
Goodale E, Sridhar H, Sieving KE, Bangal P, Z GJColorado, Farine DR, Heymann EW, Jones HH, Krams I, Martínez AE et al.. 2020. Mixed company: a framework for understanding the composition and organization of mixed-species animal groups.. Biol Rev Camb Philos Soc.
Gopurappilly R, Deb BKumar, Chakraborty P, Hasan G. 2019. Measurement of Store-Operated Calcium Entry in Human Neural Cells: From Precursors to Differentiated Neurons.. Methods Mol Biol. 2029:257-271.
Goyal A. 2018. Metabolic adaptations underlying genome flexibility in prokaryotes.. PLoS Genet. 14(10):e1007763.
Goyal A, Dubinkina V, Maslov S. 2018. Multiple stable states in microbial communities explained by the stable marriage problem.. ISME J.
Gupte TM, Haque F, Gangadharan B, Sunitha MS, Mukherjee S, Anandhan S, Rani DSelvi, Mukundan N, Jambekar A, Thangaraj K et al.. 2015. Mechanistic heterogeneity in contractile properties of α-tropomyosin (TPM1) mutants associated with inherited cardiomyopathies.. J Biol Chem. 290(11):7003-15.
Habibullah BIsmail, Tripathi V, Surana P, Das R. 2020. Monitoring protein ubiquitination and SUMOylation in real-time by NMR.. Chem Commun (Camb). 56(49):6735-6738.
Hill KBR, Marshall DC, Marathe K, Moulds MS, Lee YJune, Pham T-H, Mohagan AB, Sarkar V, Price BW, Duffels J.P et al.. 2021. The molecular systematics and diversification of a taxonomically unstable group of Asian cicada tribes related to Cicadini Latreille, 1802 (Hemiptera : Cicadidae). INVERTEBRATE SYSTEMATICS.
Hou Y, Cao C, Chiba H, Chang Z, Huang S, Zhu L, Kunte K, Huang Z, Wang M, Fan X. 2023. Molecular phylogeny, historical biogeography, and classification of Pseudocoladenia butterflies (Lepidoptera: Hesperiidae).. Mol Phylogenet Evol. 186:107865.
Javali A, Lakshmanan V, Palakodeti D, Sambasivan R. 2020. Modulation of β-catenin levels regulates cranial neural crest patterning and dispersal into first pharyngeal arch.. Dev Dyn.
Jayakumar S, Richhariya S, Deb BKumar, Hasan G. 2018. A multi-component neuronal response encodes the larval decision to pupariate upon amino acid starvation.. J Neurosci.
Jayanth N, Puranik M. 2017. Mechanism of Discrimination of 8-Oxoguanosine versus Guanosine by Escherichia coli Fpg.. J Phys Chem B.
Jethva PN, Udgaonkar JB. 2017. Modulation of the Extent of Cooperative Structural Change During Protein Folding by Chemical Denaturant.. J Phys Chem B. 121(35):8263-8275.
Kabir S, Venkatesan R, Thaker M. 2019. Mismatch in receiver responses to multimodal signals in a diurnal gecko. Animal Behaviour. 147:115-123.
Kashyap A, Sebastian SAnne, NarayanaSwamy SRaksha Kri, Raksha KK, Krishnamurthy H, Krishna B, D'Souza G, Idiculla J, Vyas N. 2022. Molecular markers for early stratification of disease severity and progression in COVID-19.. Biol Methods Protoc. 7(1):bpac028.
Kaushik S, Mahadeva M, Sundaramurthy V, Soni GVivek. 2020. Measurement of Alcohol-Dependent Physiological Changes in Red Blood Cells Using Resistive Pulse Sensing.. ACS Sens.
Khattri M, Amako Y, Gibbs JR, Collura JL, Arora R, Harold A, Li MYen, Harms PW, Ezhkova E, Shuda M. 2023. Methyltransferase-independent function of enhancer of zeste homologue 2 maintains tumorigenicity induced by human oncogenic papillomavirus and polyomavirus.. Tumour Virus Res. :200264.
Kizhedathu A, Kunnappallil RSebastian, Bagul AV, Verma P, Guha A. 2020. Multiple Wnts act synergistically to induce Chk1/Grapes expression and mediate G2 arrest in Drosophila tracheoblasts.. Elife. 9
Krishna S, Laxman S. 2018. A minimal "push-pull" bistability model explains oscillations between quiescent and proliferative cell states.. Mol Biol Cell. :mbcE18010017.
Kumar H, Udgaonkar JB. 2019. Mechanistic approaches to understand the prion-like propagation of aggregates of the human tau protein.. Biochim Biophys Acta Proteins Proteom. 1867(10):922-932.
Kumar H, Udgaonkar JB. 2018. Mechanistic and Structural Origins of the Asymmetric Barrier to Prion-like Cross-Seeding between Tau-3R and Tau-4R.. J Mol Biol.
Kumar S, M Venkatesha A, Lall S, Prakash S, Balaram P. 2020. Mechanistic Insights into an Unusual Side-Chain-Mediated N-C Bond Cleavage under Collision-Induced Dissociation Conditions in the Disulfide-Containing Peptide Conopressin.. J Am Soc Mass Spectrom. 31(5):1083-1092.
Kumar H, Singh J, Kumari P, Udgaonkar JB. 2017. Modulation of the extent of structural heterogeneity in α-synuclein fibrils by the small molecule thioflavin T.. J Biol Chem.
Kumar S, M Venkatesha A, Balaram P. 2022. Mechanistic Investigations on N-C Bond Cleavages in Dibasic Peptides Containing Internal Lys and Arg Residues.. J Am Soc Mass Spectrom.
G Kumar A, Sarkar P, Stepniewski TMaciej, Jafurulla M, Singh SPal, Selent J, Chattopadhyay A. 2021. A molecular sensor for cholesterol in the human serotonin receptor.. Sci Adv. 7(30)
Lajmi A, Giri VB, K. Karanth P. 2016. Molecular data in conjunction with morphology help resolve the Hemidactylus brookii complex (Squamata: Gekkonidae). ORGANISMS DIVERSITY & EVOLUTION. 16(3):659-677.
Madhusudan M.D, Vanak ATamim. 2022. Mapping the distribution and extent of India's semi-arid open natural ecosystems. JOURNAL OF BIOGEOGRAPHY.
Mam B, Karpe SD, Sowdhamini R. 2023. Minus-C subfamily has diverged from Classic odorant-binding proteins in honeybees. APIDOLOGIE . 54(1):12.
Manikkaraja C, Bhavika M, Singh R, Nagarathnam B, George G, Gulyani A, Archunan G, Sowdhamini R. 2020. Molecular and functional characterization of buffalo nasal epithelial odorant binding proteins and their structural insights by in silico and biochemical approaches. J Biomol Struct Dyn. :1-24.
Marshall DC, Moulds M, Hill KBR, Price BW, Wade EJ, Owen CL, Goemans G, Marathe K, Sarkar V, et al.. 2018. A molecular phylogeny of the cicadas (Hemiptera: Cicadidae) with a review of tribe and subfamily classification. ZOOTAXA. 4424(1):1-64.
Melvin P, Bankapalli K, D'Silva P, Shivaprasad PV. 2017. Methylglyoxal detoxification by a DJ-1 family protein provides dual abiotic and biotic stress tolerance in transgenic plants.. Plant Mol Biol.
Mogre A, Veetil RT, Seshasayee ASai Narain. 2017. Modulation of Global Transcriptional Regulatory Networks as a Strategy for Increasing Kanamycin Resistance of the Translational Elongation Factor-G Mutants in Escherichia coli.. G3 (Bethesda). 7(12):3955-3966.
Mohamed HM, Lakshmanan V, Sarkar SR, Lei K, Vemula PK, Palakodeti D. 2021. Mitochondrial state determines functionally divergent stem cell population in planaria. Stem Cell Reports.
Mondal S, Kallianpur MV, Udgaonkar JB, Krishnamoorthy G. 2016. Molecular crowding causes narrowing of population heterogeneity and restricts internal dynamics in a protein. METHODS AND APPLICATIONS IN FLUORESCENCE. 4(1)
Mosby LS, Hundt N, Young G, Fineberg A, Polin M, Mayor S, Kukura P, Köster DV. 2020. Myosin II Filament Dynamics in Actin Networks Revealed with Interferometric Scattering Microscopy.. Biophys J. 118(8):1946-1957.
Parma V, Ohla K, Veldhuizen MG, Niv MY, Kelly CE, Bakke AJ, Cooper KW, Bouysset C, Pirastu N, Dibattista M et al.. 2020. More than smell - COVID-19 is associated with severe impairment of smell, taste, and chemesthesis.. Chem Senses.
Pillai AAS, Anoop A, Prasad V. 2018. Multi-proxy evidence for an arid shift in the climate and vegetation of the Banni grasslands of western India during the mid- to late-Holocene. Holocene. 28(7):10572-1070.
Raghavender US, Sowdhamini R. 2015. Mechanistic Basis Of Peptide-Protein Interaction In AtPep1-PEPR1 Complex In Arabidopsis thaliana.. Protein Pept Lett. 22(7):618-27.
Ramesh D, Brockmann A. 2019. Mass Spectrometric Quantification of Arousal Associated Neurochemical Changes in Single Honey Bee Brains and Brain Regions.. ACS Chem Neurosci. 10(4):950-1959.
Rasquinha DN, Sankaran M. 2016. Modelling biome shifts in the Indian subcontinent under scenarios of future climate change . Current Science. 111(1):147-156.
Rege A, Punjabi GArjun, Jathanna D, Kumar A. 2020. Mammals Make Use of Cashew Plantations in a Mixed Forest-Cashew Landscape. FRONTIERS IN ENVIRONMENTAL SCIENCE. 8(556942)
Riedel N, Fuller DQ, Marwan N, Poretschkin C, Basavaiah N, Menzel P, Ratnam J, Prasad S, Sachse D, Sankaran M et al.. 2021. Monsoon forced evolution of savanna and the spread of agro-pastoralism in peninsular India.. Sci Rep. 11(1):9032.
Roselli C, Ramaswami M, Boto T, Cervantes-Sandoval I. 2021. The Making of Long-Lasting Memories: A Fruit Fly Perspective.. Front Behav Neurosci. . 15
Roy N, Sundar S, Pillai M, Patell-Socha F, Ganesh S, Aloysius A, Rumman M, Gala H, Hughes SM, Zammit PS et al.. 2021. mRNP granule proteins Fmrp and Dcp1a differentially regulate mRNP complexes to contribute to control of muscle stem cell quiescence and activation.. Skelet Muscle. 11(1):18.
Sabareesan AThody, Mathew MK, Udgaonkar JB. 2018. Mechanism of aggregation and membrane interactions of mammalian prion protein.. Biochim Biophys Acta.
Sabarinathan R, Anthon C, Gorodkin J, Seemann SE. 2018. Multiple Sequence Alignments Enhance Boundary Definition of RNA Structures.. Genes (Basel). 9(12)
Sachdeva K, Goel M, Sudhakar M, Mehta M, Raju R, Raman K, Singh A, Sundaramurthy V. 2020. Mycobacterium tuberculosis ( Mtb) lipid mediated lysosomal rewiring in infected macrophages modulates intracellular Mtb trafficking and survival. J Biol Chem. 295(27):9192-9210.
Sant HH, Sane SP. 2018. The Mechanosensory-Motor Apparatus of Antennae in the Oleander hawk moth (Daphnis nerii, Lepidoptera).. J Comp Neurol.
Sathyanarayanan N, Cannone G, Gakhar L, Katagihallimath N, Sowdhamini R, Ramaswamy S, Vinothkumar KR. 2019. Molecular basis for metabolite channeling in a ring opening enzyme of the phenylacetate degradation pathway.. Nat Commun. 10(1):4127.
Schwarz O, Bohra AAsgar, Liu X, Reichert H, VijayRaghavan K, Pielage J. 2017. Motor control of Drosophila feeding behavior.. Elife. 6
Sen S, Kumar H, Udgaonkar JB. 2021. Microsecond dynamics during the binding-induced folding of an intrinsically disordered protein.. J Mol Biol. :167254.
Sengupta I, Udgaonkar J. 2019. Monitoring site-specific conformational changes in real-time reveals a misfolding mechanism of the prion protein.. Elife. 8
Sezgin E, Levental I, Mayor S, Eggeling C. 2017. The mystery of membrane organization: composition, regulation and roles of lipid rafts.. Nat Rev Mol Cell Biol.
Sharma A, Hasan G. 2020. Modulation of flight and feeding behaviours requires presynaptic IPRs in dopaminergic neurons.. Elife. 9
Shivakumaraswamy S, Kumar S, Bellur A, Polisetty SDev, Balaram H. 2022. Mechanistic Insights into the Functioning of a Two-Subunit GMP Synthetase, an Allosterically Regulated, Ammonia Channeling Enzyme. BIOCHEMISTRY. 61(18):1988-2006.
Singh J, Udgaonkar JB. 2015. Molecular Mechanism of the Misfolding and Oligomerization of the Prion Protein: Current Understanding and Its Implications.. Biochemistry. 54(29):4431-42.
Singh G, George G, Raja SO, Kandaswamy P, Kumar M, Thutupalli S, Laxman S, Gulyani A. 2023. A molecular rotor FLIM probe reveals dynamic coupling between mitochondrial inner membrane fluidity and cellular respiration.. Proc Natl Acad Sci U S A. 120(24):e2213241120.
Swetha C, Basu D, Pachamuthu K, Tirumalai V, Nair A, Prasad M, Shivaprasad PV. 2018. Major domestication-related phenotypes in indica rice are due to loss of miRNA-mediated laccase silencing.. Plant Cell.
Terse VL, Gosavi S. 2021. The molecular mechanism of domain-swapping of the C-terminal domain of the SARS coronavirus main protease. Biophys J. 120(3):504-516.
Thattai M. 2023. Molecular and cellular constraints on vesicle traffic evolution.. Curr Opin Cell Biol. 80:102151.
Thatte P, Joshi A, Vaidyanathan S, Landguth E, Ramakrishnan U. 2018. Maintaining tiger connectivity and minimizing extinction into the next century: Insights from landscape genetics and spatially-explicit simulations . BIOLOGICAL CONSERVATION . 218:181-191.
Theeyancheri L, Chaki S, Bhattacharjee T, Chakrabarti R. 2022. Migration of active rings in porous media.. Phys Rev E. 106(1-1):014504.