Journal Article
Bhalla US.
2021. HillTau: A fast, compact abstraction for model reduction in biochemical signaling networks.. PLoS Comput Biol. 17(11):e1009621.
Madan JS, Gupta K, Chattarji S, Bhattacharya A.
2018. Hippocampal and amygdalar cell-specific translation is similar soon after stress but diverge over time.. Hippocampus.
Varghese PC, Rajam SM, Nandy D, Jory A, Mukherjee A, Dutta D.
2021. Histone chaperone APLF level dictate implantation of mouse embryo. J Cell Sci. 134(1)
Saha S, Raghupathy R, Mayor S.
2015. Homo-FRET imaging highlights the nanoscale organization of cell surface molecules.. Methods Mol Biol. 1251:151-73.
Somasundaram S, Véry A-A, Vinekar RS, Ishikawa T, Kumari K, Pulipati S, Kumaresan K, Corratgé-Faillie C, Sowdhamini R, Parida A et al..
2020. Homology modeling identifies crucial amino-acid residues that confer higher Na+ transport capacity of OcHKT1;5 from Oryza coarctata Roxb.. Plant Cell Physiol.
Singh AS, Shah A, Brockmann A.
2018. Honey bee foraging induces upregulation of early growth response protein 1, hormone receptor 38 and candidate downstream genes of the ecdysteroid signalling pathway.. Insect Mol Biol. 27(1):90-98.
Chatterjee A, George EA, V PM, Basu P, Brockmann A.
2019. Honey bees flexibly use two navigational memories when updating dance distance information.. J Exp Biol. 222(Pt 11)
Sundaramurthy V, Haldar J.
2024. Honoring a Legacy: "Vigyan Ratna" Prof. G. Padmanaban.. ACS Infect Dis.
Deb R, Nair A, Agashe D.
2019. Host dietary specialization and neutral assembly shape gut bacterial communities of wild dragonflies.. PeerJ. 7:e8058.
Ansil BR, Viswanathan A, Ramachandran V, Yeshwanth HM, Sanyal A, Ramakrishnan U.
2025. Host-Pathogen-Vector Continuum in a Changing Landscape: Potential Transmission Pathways for in a Small Mammal Community.. Ecol Evol. 15(4):e71085.
Nair A, Agashe D.
2016. Host-specific, spatial and temporal variation in culturable gut bacterial communities of dragonflies. Current Science. 110(8):1513-1523.
Malhotra P, Udgaonkar JB.
2016. How cooperative are protein folding and unfolding transitions? Protein Sci.
Chandrasegaran K, Juliano SA.
2019. How Do Trait-Mediated Non-lethal Effects of Predation Affect Population-Level Performance of Mosquitoes? Front Ecol Evol. 7
Brockmann A.
2023. How India Changed My Ideas About Honey Bees. JOURNAL OF THE INDIAN INSTITUTE OF SCIENCE .
Aylward M, Sagar V, Natesh M, Ramakrishnan U.
2022. How methodological changes have influenced our understanding of population structure in threatened species: insights from tiger populations across India.. Philos Trans R Soc Lond B Biol Sci. 377(1852):20200418.
Willemen L, Barger NN, Brink Bten, Cantele M, Erasmus BFN, Fisher JL, Gardner T, Holland TG, Kohler F, Kotiaho JS et al..
2020. How to halt the global decline of lands. NATURE SUSTAINABILITY.
Mukherjee S, Murata A, Ishida R, Sugai A, Dohno C, Hamada M, Krishna S, Nakatani K.
2022. HT-SELEX-based identification of binding pre-miRNA hairpin-motif for small molecules.. Mol Ther Nucleic Acids. 27:165-174.
Thatte P, Chandramouli A, Tyagi A, Patel K, Baro P, Chhattani H, Ramakrishnan U.
2020. Human footprint differentially impacts genetic connectivity of four wide-ranging mammals in a fragmented landscape. DIVERSITY AND DISTRIBUTIONS. 26(3):299-314.
Thatte P, Chandramouli A, Tyagi A, Patel K, Baro B, Chhattani H, Ramakrishnan U.
2019. Human footprint differentially impacts genetic connectivity of four wide‐ranging mammals in a fragmented landscape. Diversity and Distribution.
Akhtar BM, Bhatia P, Acharya S, Sharma S, Sharma Y, Aswathy BS, Ganapathy K, Vasudevan A, Raghu P.
2022. A human stem cell resource to decipher the biochemical and cellular basis of neurodevelopmental defects in Lowe Syndrome.. Biol Open.
Kamdar A, Baishya HKumar, Nagendra H, Ratnam J, Smith D, Sekar N.
2022. Human–elephant conflict mitigation as a public good: what determines fence maintenance? Ecology and Society. 27(3)
Ramachandran R, Kumar A, Sundar KSGopi, Bhalla RSingh.
2017. Hunting or habitat? Drivers of waterbird abundance and community structure in agricultural wetlands of southern India. Ambio.
Agrawal R, Pal VKumar, S SK, Menon GJayan, Singh IRaj, Malhotra N, S NC, Ganesh K, Rajmani RS, Seshasayee ASai Narain et al..
2025. Hydrogen sulfide (H2S) coordinates redox balance, carbon metabolism, and mitochondrial bioenergetics to suppress SARS-CoV-2 infection.. PLoS Pathog. 21(5):e1013164.
Sarkar SS, Trivedi DV, Morck MM, Adhikari AS, Pasha SN, Ruppel KM, Spudich JA.
2020. The hypertrophic cardiomyopathy mutations R403Q and R663H increase the number of myosin heads available to interact with actin.. Sci Adv. 6(14):eaax0069.
Kakani P, Dhamdhere SGanesh, Pant D, Joshi R, Mishra S, Pandey A, Notani D, Shukla S.
2025. Hypoxia-induced CTCF mediates alternative splicing via coupling chromatin looping and RNA Pol II pause to promote EMT in breast cancer.. Cell Rep. 44(2):115267.
Chaturvedi D, Reichert H, Gunage RD, VijayRaghavan K.
2017. Identification and functional characterization of muscle satellite cells in Drosophila.. Elife. 6
Nadella RK, Chellappa A, Subramaniam AG, More RPrabhakar, Shetty S, Prakash S, Ratna N, Vandana VP, Purushottam M, Saini J et al..
2019. Identification and functional characterization of two novel mutations in KCNJ10 and PI4KB in SeSAME syndrome without electrolyte imbalance.. Hum Genomics. 13(1):53.
Moulick R, Udgaonkar JB.
2017. Identification and structural characterization of the precursor conformation of the prion protein which directly initiates misfolding and oligomerization.. J Mol Biol.
Bohra AAsgar, Kallman BR, Reichert H, VijayRaghavan K.
2018. Identification of a Single Pair of Interneurons for Bitter Taste Processing in the Drosophila Brain.. Curr Biol.
Karpe SD, Jain R, Brockmann A, Sowdhamini R.
2016. Identification of Complete Repertoire of Apis florea Odorant Receptors Reveals Complex Orthologous Relationships with Apis mellifera.. Genome Biol Evol. 8(9):2879-2895.
Ansil BR, Sanyal A, Sreenivas D, Garg KM, Ramakrishnan U, Chattopadhyay B.
2025. Identification of Distinct Rodent-Associated Adenovirus Lineages from Mixed-Use Landscape.. Ecohealth.
Cha DH, Olsson SB, Yee WL, Goughnour RB, Hood GR, Mattsson M, Schwarz D, Feder JL, Linn CE.
2017. Identification of Host Fruit Volatiles from Snowberry (Symphoricarpos albus), Attractive to Rhagoletis zephyria Flies from the Western United States.. J Chem Ecol.
Tiwari V, Viswanath S.
2022. Identification of potential modulators of IFITM3 by in-silico modeling and virtual screening.. Sci Rep. 12(1):15952.
Ashwini N, Sajeevan RSivarajan, Udayakumar M, Nataraja KN.
2018. Identification of splice variant of in ssp. genotypes under salinity stress.. 3 Biotech. 8(8):345.
Nair D, Krishna JGopala, Panikkar MVelayudhan, Nair BGopalakris, Pai JGopalakris, Nair SSadasivan.
2018. Identification, purification, biochemical and mass spectrometric characterization of novel phycobiliproteins from a marine red alga, Centroceras clavulatum.. Int J Biol Macromol.
Chakrabarti S.
2024. Identifying memory genes in cancer drug tolerance.. Nat Rev Cancer.
Joshi RS, Panicker MM.
2018. Identifying the Cellular Correlates of Antipsychotic Drugs.. eNeuro. 5(5)
Nazari V, Kunte K, Balint Z.
2023. On the identity of Hesperia parrhasius Fabricius, 1793 and its allied species (Lepidoptera: Lycaenidae). JOURNAL OF ASIA-PACIFIC ENTOMOLOGY . 26(4):102165.
Werner S, Okenve-Ramos P, Hehlert P, Zitouni S, Priya P, Mendonça S, Sporbert A, Spalthoff C, Göpfert MC, Jana SChandra et al..
2024. IFT88 maintains sensory function by localising signalling proteins along cilia.. Life Sci Alliance. 7(5)
Francis B, Mathew M, Arigovindan M.
2019. Image reconstruction from undersampled confocal microscopy data using multiresolution based maximum entropy regularization. Journal of Instrumentation. 14
Anstey NJ, Kapgal V., Tiwari S., Watson TC, Toft AKH, Dando OR, Inkpen FH, Baxter PS, Kozić Z, Jackson AD et al..
2022. Imbalance of flight-freeze responses and their cellular correlates in the Nlgn3 -/y rat model of autism. Mol Autism.. 13(1):34.
Singh ASurindro, Takhellambam MChanu, Cappelletti P, Feligioni M.
2020. Immediate early gene kakusei potentially plays a role in the daily foraging of honey bees.. PLoS One. 15(5):e0222256.
Sommerlandt FMJ, Brockmann A, Rössler W, Spaethe J.
2019. Immediate early genes in social insects: a tool to identify brain regions involved in complex behaviors and molecular processes underlying neuroplasticity.. Cell Mol Life Sci. 76(4):637-651.
Sankaradoss A, Jagtap S, Nazir J, Moula S-E, Modak A, Fialho J, Iyer M, Shastri JS, Dias M, Gadepalli R et al..
2022. Immune profile and responses of a novel Dengue DNA vaccine encoding EDIII-NS1 consensus design based on Indo-African sequences.. Mol Ther.
Asokan MS, Joan RFlorina, Babji S, Dayma G, Nadukkandy P, Subrahmanyam V, Pandey A, Malagi G, Arya P, Mahajan V et al..
2024. Immunogenicity of SARS-CoV-2 vaccines BBV152 (COVAXIN®) and ChAdOx1 nCoV-19 (COVISHIELD™) in seronegative and seropositive individuals in India: a multicentre, nonrandomised observational study.. Lancet Reg Health Southeast Asia. 22:100361.
Sabarinathan R.
2024. Immunoproteasome as a biomarker for immunotherapy.. Nat Rev Cancer.
Khan I, Prakash A, Agashe D.
2016. Immunosenescence and the ability to survive bacterial infection in the red flour beetle Tribolium castaneum.. J Anim Ecol. 85(1):291-301.
Saha S, Krishnan H, Raghu P.
2024. IMPA1 dependent regulation of phosphatidylinositol 4,5-bisphosphate and calcium signalling by lithium.. Life Sci Alliance. 7(2):e202302425.
Samhita L, Raval PK, Stephenson G, Thutupalli S, Agashe D.
2021. The Impact of Mistranslation on Phenotypic Variability and Fitness.. Evolution.
Sanjenbam P, Shivaprasad P.V, Agashe D.
2022. Impact of Phyllosphere Methylobacterium on Host Rice Landraces. MICROBIOLOGY SPECTRUM.
Sanjenbam P, Shivaprasad PV, Agashe D.
2022. Impact of Phyllosphere on Host Rice Landraces.. Microbiol Spectr. 10(4):e0081022.
Salian SRaj, Pandya RKirit, Laxminarayana SLakshmi Ko, Krishnamurthy H, Cheredath A, Tholeti P, Uppangala S, Kalthur G, Majumdar S, Schlatt S et al..
2020. Impact of Temperature and Time Interval Prior to Immature Testicular-Tissue Organotypic Culture on Cellular Niche.. Reprod Sci.
Suryawanshi KR, Redpath SM, Bhatnagar YVeer, Ramakrishnan U, Chaturvedi V, Smout SC, Mishra C.
2017. Impact of wild prey availability on livestock predation by snow leopards.. R Soc Open Sci. 4(6):170026.
Dwivedi D, Chattarji S, Bhalla US.
2019. Impaired reliability and precision of spiking in adults but not juveniles in a mouse model of Fragile X Syndrome.. eNeuro.
Blanco-Redondo B, Nuwal N, Kneitz S, Nuwal T, Halder P, Liu Y, Ehmann N, Scholz N, Mayer A, Kleber J et al..
2019. Implications of the null mutation for synapsin phosphorylation, longevity, climbing, and behavioural plasticity in adult .. J Exp Biol.
Das A, Thaker M, Coetsee C, Slotow R, Vanak AT.
2021. The importance of history in understanding large tree mortality in African savannas. ECOGRAPHY .
Jain H, Ghosh S.
2024. Imprinting reversible deformations on a compressed soft rod network. SOFT MATTER. 20(26)
Sahay S, Adhikari S, Hormoz S, Chakrabarti S.
2023. An improved rhythmicity analysis method using Gaussian Processes detects cell-density dependent circadian oscillations in stem cells.. Bioinformatics.
Syiem BLa Nam, Goswami VR, Vasudev D.
2018. "In a tree by the brook, there's a songbird who sings": Woodlands in an agricultural matrix maintain functionality of a wintering bird community.. PLoS One. 13(8):e0201657.
Singh N, Prakash A, Chakravarthy SRanganath, Kaushik R, Ladher RK.
2022. In Ovo and Ex Ovo Methods to Study Avian Inner Ear Development.. J Vis Exp. (184)
Mahita J, Harini K, Pichika MRao, Sowdhamini R.
2016. An in silico approach towards the identification of novel inhibitors of the TLR-4 signaling pathway.. J Biomol Struct Dyn. 34(6):1345-62.
Sinha V, Goyal A, Svenningsen SL, Semsey S, Krishna S.
2017. In silico Evolution of Lysis-Lysogeny Strategies Reproduces Observed Lysogeny Propensities in Temperate Bacteriophages.. Front Microbiol. 8:1386.
Nordström K, Dahlbom J, Pragadheesh VS, Ghosh S, Olsson A, Dyakova O, Suresh SKrishna, Olsson SB.
2017. In situ modeling of multimodal floral cues attracting wild pollinators across environments.. Proc Natl Acad Sci U S A.
Nayim P, Sudhir K, Mbaveng AT, Kuete V, Sanjukta M.
2021. In Vitro Anticancer Activity of Root's Extract toward Human Cervical Cancer and Identification of Potential Bioactive Compounds.. Biomed Res Int. 2021:4259777.
Sharma Y, Saha S, Joseph A, Krishnan H, Raghu P.
2020. In vitro human stem cell derived cultures to monitor calcium signaling in neuronal development and function. Wellcome Open Res. 5:16.
Maihoff F, Bohlke K, Brockmann A, Schmitt T.
2022. Increased complexity of worker CHC profiles in Apis dorsata correlates with nesting ecology.. PLoS One. 17(7):e0271745.
P HAhmed, V V, More RPrabhakar, Viswanath B, Jain S, Rao MS, Mukherjee O.
2019. INDEX-db: The Indian Exome Reference Database (Phase I).. J Comput Biol.
Tripathi AMani, Singh R, Verma AKumar, Singh A, Mishra P, Dwivedi V, Narayan S, G Sundar VHari, Shirke PArvind, Shivaprasad PV et al..
2023. Indian Himalayan natural Arabidopsis thaliana accessions with abolished miR158 levels exhibit robust miR173-initiated trans-acting cascade silencing.. Plant J.
Panicker D, Haris A, Sutaria D.
2018. Indian Ocean humpback dolphin (Sousa plumbea) estuary-use patterns in Kochi harbor, India. MARINE MAMMAL SCIENCE. 34(1):208-219.
Bhaumik V, Kumar A, Ratnam J.
2024. Indian wildlife ecology comes of age.. Nat Ecol Evol.
Amanullah A, Mishra R, Upadhyay A, Reddy PP, Das R, Mishra A.
2018. Indomethacin elicits proteasomal dysfunctions develops apoptosis through mitochondrial abnormalities.. J Cell Physiol. 233(2):1685-1699.
Dwivedi V, Kumar SRajeev, Shilpashree HB, Krishna R, Rao S, Shasany AK, Olsson SB, Nagegowda DA.
2022. An inducible potato (E,E)-farnesol synthase confers tolerance against bacterial pathogens in potato and tobacco.. Plant J.
Periasamy VSubbarayan, Riyasdeen A, Rajendiran V, Palaniandavar M, Krishnamurthy H, Alshatwi AAbdullah, Akbarsha MAbdulkader.
2020. Induction of Redox-Mediated Cell Death in ER-Positive and ER-Negative Breast Cancer Cells by a Copper(II)-Phenolate Complex: An In Vitro and In Silico Study.. Molecules. 25(19)
Rajasekaran S, Thatte J, Periasamy J, Javali A, Jayaram M, Sen D, Krishnagopal A, Jayandharan GR, Sambasivan R.
2018. Infectivity of adeno-associated virus serotypes in mouse testis.. BMC Biotechnol. 18(1):70.
Prabantu VManjveekar, Naveenkumar N, Srinivasan N.
2021. Influence of Disease-Causing Mutations on Protein Structural Networks.. Front Mol Biosci. 7:620554.
Kalappa DMonnanda, Subramani PAnnamalai, Basavanna SKanchanaha, Ghosh SKumar, Sundaramurthy V, Uragayala S, Tiwari S, Anvikar AR, Valecha N.
2018. Influence of midgut microbiota in Anopheles stephensi on Plasmodium berghei infections.. Malar J. 17(1):385.
Mam B, Tsitsanou KE, Liggri PGV, Saitta F, Stamati ECV, Mahita J, Leonis G, Drakou CE, Papadopoulos M, Arnaud P et al..
2023. Influence of pH on indole-dependent heterodimeric interactions between Anopheles gambiae odorant-binding proteins OBP1 and OBP4.. Int J Biol Macromol. :125422.
Rajani P, Rajasekaran C, Vasanthakumari MM, Olsson SB, Ravikanth G, R Shaanker U.
2021. Inhibition of plant pathogenic fungi by endophytic Trichoderma spp. through mycoparasitism and volatile organic compounds.. Microbiol Res. 242:126595.
Barron HC, Vogels TP, Behrens TE, Ramaswami M.
2017. Inhibitory engrams in perception and memory.. Proc Natl Acad Sci U S A.
Bhatt T, Dey R, Hegde A, Ketkar AAshok, Pulianmackal AJ, Deb AP, Rampalli S, Jamora C.
2022. Initiation of wound healing is regulated by the convergence of mechanical and epigenetic cues.. PLoS Biol. 20(9):e3001777.
Sane SP, Ramaswamy SSubha, Raja SVarma.
2020. Insect architecture: structural diversity and behavioral principles.. Curr Opin Insect Sci.
Treidel LA, Deem KD, Salcedo MK, Dickinson MH, Bruce HS, Darveau C-A, Dickerson BH, Ellers O, Glass JR, Gordon CM et al..
2024. Insect Flight: State of the Field and Future Directions.. Integr Comp Biol.
Karpe SDilip, Tiwari V, Ramanathan S.
2021. InsectOR-Webserver for sensitive identification of insect olfactory receptor genes from non-model genomes.. PLoS One. 16(1):e0245324.
Srivathsa A, K Karanth U, N Kumar S, Oli MK.
2019. Insights from distribution dynamics inform strategies to conserve a dhole Cuon alpinus metapopulation in India.. Sci Rep. 9(1):3081.
Ambardar S., Vakhlu J, Sowdhamini R..
2022. Insights from the analysis of draft genome sequence of Crocus sativus L. Bioinformation. 18(1):1-13.
Rodrigues D, Vijayraghavan K., Waltzer L, Inamdar MS.
2021. Intact in situ Preparation of the Drosophila melanogaster Lymph Gland for a Comprehensive Analysis of Larval Hematopoiesis . Bio Protoc. 11(21):e4204.
Verma S, Reddy P, Sowdhamini R.
2023. Integrated approaches for the recognition of small molecule inhibitors for Toll-like receptor 4.. Comput Struct Biotechnol J. 21:3680-3689.
Liu X, Zhang Y, Wen Z, Hao Y, Banks CAS, Cesare J, Bhattacharya S, Arvindekar S, Lange JJ, Xie Y et al..
2024. An integrated structural model of the DNA damage-responsive H3K4me3 binding WDR76:SPIN1 complex with the nucleosome.. Proc Natl Acad Sci U S A. 121(33):e2318601121.
Chatterjee P, Prusty ADev, Mohan U, Sane SP.
2022. Integration of visual and antennal mechanosensory feedback during head stabilization in hawkmoths.. Elife. 11
Mahita J, Sowdhamini R.
2017. Integrative modelling of TIR domain-containing adaptor molecule inducing interferon-β (TRIF) provides insights into its autoinhibited state.. Biol Direct. 12(1):9.
Chauhan PKumar, Sowdhamini R.
2022. Integrative network analysis interweaves the missing links in cardiomyopathy diseasome.. Sci Rep. 12(1):19670.
Kalappurakkal JMathew, Anilkumar AAmbika, Patra C, van Zanten TS, Sheetz MP, Mayor S.
2019. Integrin Mechano-chemical Signaling Generates Plasma Membrane Nanodomains that Promote Cell Spreading.. Cell. 177(7):1738-1756.e23.
Dey M, Krishnaswamy J, Morisaka T, Kelkar N.
2019. Interacting effects of vessel noise and shallow river depth elevate metabolic stress in Ganges river dolphins.. Sci Rep. 9(1):15426.
Chen S., Li J., Vinothkumar KR, Henderson R..
2022. Interaction of human erythrocyte catalase with air-water interface in cryoEM.. Microscopy (Oxf). 71((Supplement_1)):i51-i59.
Wills C, Wang B, Fang S, Wang Y, Jin Y, Lutz J, Thompson J, Harms KE, Pulla S, Pasion B et al..
2021. Interactions between all pairs of neighboring trees in 16 forests worldwide reveal details of unique ecological processes in each forest, and provide windows into their evolutionary histories.. PLoS Comput Biol. 17(4):e1008853.
Badarinath K, Dutta A, Hegde A, Pincha N, Gund R, Jamora C.
2018. Interactions Between Epidermal Keratinocytes, Dendritic Epidermal T-Cells, and Hair Follicle Stem Cells.. Methods Mol Biol.
Farooq U, Saravanan B, Islam Z, Walavalkar K, Singh AKumar, Jayani RSingh, Meel S, Swaminathan S, Notani D.
2021. An interdependent network of functional enhancers regulates transcription and EZH2 loading at the INK4a/ARF locus.. Cell Rep. 34(12):108898.
Jeancolas C, Singh AY, Jain S, Krishna S, Nghe P.
2023. An interdisciplinary effort to understand chemical organizations at the origin of life.. iScience. 26(1):105834.