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Alexandrov LB, Kim J, Haradhvala NJ, Huang MNi, Ng AWei Tian, Wu Y, Boot A, Covington KR, Gordenin DA, Bergstrom EN et al..  2020.  The repertoire of mutational signatures in human cancer. Nature. 578(7793):94-101.
Patel D, Anilkumar S, Chattarji S, de Boer SF, Buwalda B.  2021.  Repeated victorious and defeat experiences induce similar apical dendritic spine remodeling in CA1 hippocampus of rats.. Behav Brain Res. 406:113243.
Patel D, Anilkumar S, Chattarji S, Buwalda B.  2018.  Repeated social stress leads to contrasting patterns of structural plasticity in the amygdala and hippocampus.. Behav Brain Res. 347:314-324.
Jain I, Rao M, Tran PT.  2023.  Reliable and robust control of nucleus centering is contingent on nonequilibrium force patterns.. iScience. 26(5):106665.
Khanal G, Mishra C, Suryawanshi KR.  2020.  Relative influence of wild prey and livestock abundance on carnivore-caused livestock predation. ECOLOGY AND EVOLUTION.
Gautam S, Mahapa A, Yeramala L, Gandhi A, Krishnan S, Vinothkumar KR, Chatterji D.  2023.  Regulatory mechanisms of c-di-AMP synthase (MsDisA) protein from Mycobacterium smegmatis revealed by a structure - function analysis.. Protein Sci. :e4568.
Dubey AK, Godbole A, Mathew MK.  2016.  Regulation of VDAC trafficking modulates cell death.. Cell Death Discov. 2:16085.
Deb BK, Hasan G.  2016.  Regulation of Store-Operated Ca(2+) Entry by Septins.. Front Cell Dev Biol. 4:142.
Chakraborty P., Deb B.K, Arige V., Musthafa T., Malik S., Yule D.I, Taylor C.W., Hasan G.  2023.  Regulation of store-operated Ca2+ entry by IP3 receptors independent of their ability to release Ca2.. Elife. 12(e80447)
Narjala A, Shivaprasad PV.  2017.  Regulation of Plant miRNA Biogenesis.
Narjala A, Shivaprasad PV.  2017.  Regulation of Plant microRNA Biogenesis.
Balakrishnan SS, Basu U, Shinde D, Thakur R, Jaiswal M, Raghu P.  2018.  Regulation of PI4P levels by PI4KIIIα during G-protein coupled PLC signaling in photoreceptors.. J Cell Sci.
Hasan G, Sharma A.  2020.  Regulation of neuronal physiology by Ca2+ release through the IP3R. Current Opinion in Physiology. 17:1-8.
Thakur R, Naik A, Panda A, Raghu P.  2019.  Regulation of Membrane Turnover by Phosphatidic Acid: Cellular Functions and Disease Implications.. Front Cell Dev Biol. 7:83.
Lal A, Krishna S, Seshasayee ASai Narain.  2018.  Regulation of Global Transcription in by Rsd and 6S RNA.. G3 (Bethesda).
Chawla S, Oster H, Duffield GE, Maronde E, Guido ME, Chabot C, Dkhissi-Benyahya O, Provencio I, Goel N, Youngstedt SD et al..  2024.  Reflections on Several Landmark Advances in Circadian Biology.. J Circadian Rhythms. 22:1.
Cyriac VP, Johny A, Umesh P, Palot M, Campbell PD.  2019.  Rediscovery of Cnemaspis nilagirica Manamendra-Arachchi, Batuwita and Pethiyagoda, 2007 (Squamata: Gekkonidae) from Kerala, India with notes on morphology and distribution. ZOOTAXA. 4586(1):98-108.
Sondhi S., Karmakar T., Sondhi Y., Jhaveri R., Kunte K.  2016.  Re-discovery of Calinaga aborica Tytler, 1915 (Lepidoptera: Nymphalidae: Calinaginae) from Arunachal Pradesh, India. Journal of Threatened Taxa. 8:8618–8622.
Patil S, Palande A, Lodhiya T, Pandit A, Mukherjee R.  2021.  Redefining genetic essentiality in Mycobacterium tuberculosis.. Gene. 765:145091.
Agarwal A, Agashe D.  2020.  The red flour beetle Tribolium castaneum: A model for host-microbiome interactions.. PLoS One. 15(10):e0239051.
Thirumalai V, Jha U.  2022.  Recruitment of Motoneurons.. Vertebrate Motoneurons (Series: Advances in Neurobiology). 28:169-190.
Dash PKumar, Pattabiraman C, Tandel K, Sharma S, Kumar JS, Siddappa S, Gowda M, Krishna S, Parida M.  2018.  Recovery of Five Complete Influenza A(H1N1)pdm09 Genome Sequences from the 2015 Influenza Outbreak in India by Metagenomic Sequencing.. Genome Announc. 6(26)
Köster DVasco, Bhat A, Talluri S, Mayor S.  2022.  Reconstitution of Membrane-tethered Minimal Actin Cortices on Supported Lipid Bilayers.. J Vis Exp. (185)
Kent BA, Holman C, Amoako E, Antonietti A, Azam JM, Ballhausen H, Bediako Y, Belasen AM, Carneiro CFD, Chen Y-C et al..  2022.  Recommendations for empowering early career researchers to improve research culture and practice.. PLoS Biol. 20(7):e3001680.
Subrahmanyam R, Dwivedi D, Rashid Z, Bonnycastle K, Cousin MA, Chattarji S.  2021.  Reciprocal regulation of spontaneous synaptic vesicle fusion by Fragile X mental retardation protein and group I metabotropic glutamate receptors.. J Neurochem.
Gerkin RC, Ohla K, Veldhuizen MG, Joseph PV, Kelly CE, Bakke AJ, Steele KE, Farruggia MC, Pellegrino R, Pepino MY et al..  2021.  Recent smell loss is the best predictor of COVID-19 among individuals with recent respiratory symptoms. Chem Senses. 46
Arvindekar S, Majila K, Viswanath S.  2026.  Recent Methods from Statistical Inference for Integrative Structural Modeling. Springer Handbook of Chem- and Bioinformatics . :1075–1103.
Armstrong EE, Khan A, Taylor RW, Gouy A, Greenbaum G, Thiéry A, Kang JTL, Redondo SA, Prost S, Barsh G et al..  2021.  Recent evolutionary history of tigers highlights contrasting roles of genetic drift and selection.. Mol Biol Evol.
Chaitanya R, Giri VB, Deepak V..  2017.  On the recent designation of a neotype for the taxon Calotes versicolor (Daudin, 1802) (Reptilia: Agamidae). Zootaxa. 4317(3):585-587.
Hemalatha A, Mayor S.  2019.  Recent advances in clathrin-independent endocytosis.. F1000Res. 8
Khan A, Krishna S.M., Ramakrishnan U, Das R.  2021.  Recapitulating whole genome based population genetic structure for Indian wild tigers through an ancestry informative marker panel. Heredity (Edinb).
Gower DJ, Giri V, Captain A, Wilkinson M.  2016.  A reassessment of Melanophidium Günther, 1864 (Squamata: Serpentes: Uropeltidae) from the Western Ghats of peninsular India, with the description of a new species.. Zootaxa. 4085(4):481-503.
Kottur J, Nair DT.  2016.  Reactive Oxygen Species Play an Important Role in the Bactericidal Activity of Quinolone Antibiotics.. Angew Chem Int Ed Engl. 55(7):2397-400.
Yadav S, Thakur R, Georgiev P, Deivasigamani S, Krishnan H, Ratnaparkhi G, Raghu P.  2018.  RDGBα localization and function at membrane contact sites is regulated by FFAT-VAP interactions.. J Cell Sci. 131(1)
Yadav S, Garner K, Georgiev P, Li M, Gomez-Espinosa E, Panda A, Mathre S, Okkenhaug H, Cockcroft S, Raghu P.  2015.  RDGBα, a PtdIns-PtdOH transfer protein, regulates G-protein-coupled PtdIns(4,5)P2 signalling during Drosophila phototransduction.. J Cell Sci. 128(17):3330-44.
Baliga C, Majhi S, Mondal K, Bhattacharjee A, VijayRaghavan K, Varadarajan R.  2016.  Rational elicitation of cold-sensitive phenotypes.. Proc Natl Acad Sci U S A. 113(18):E2506-15.
Das A, Yadav A, Gupta M, R P, Terse VL, Vishvakarma V, Singh S, Nandi T, Banerjee A, Mandal K et al..  2021.  Rational Design of Protein-Specific Folding Modifiers.. J Am Chem Soc.
Prakash V, Saha S, Chakraborty K, Krishnan Y.  2016.  Rational design of a quantitative, pH-insensitive, nucleic acid based fluorescent chloride reporter. Chemical Science . 7:1946-1953.
Das U, Regati D, Sowdhamini R., Kumar J.  2026.  Rational design and comparative docking and simulation of modified FLT3 inhibitors: a study on enhanced binding stability and inhibition potency. Journal of Molecular Modeling. 32
Ganguly D, Srivathsa A.  2024.  Ratel Mellivora capensis in a human-dominated savanna landscape in Kachchh, Gujarat, India. Small Carnivore Conservation. 62
Walavalkar K, Saravanan B, Singh AKumar, Jayani RSingh, Nair A, Farooq U, Islam Z, Soota D, Mann R, Shivaprasad PV et al..  2020.  A rare variant of African ancestry activates 8q24 lncRNA hub by modulating cancer associated enhancer.. Nat Commun. 11(1):3598.
Kharva H, Feder JL, Hahn DA, Olsson SB.  2022.  Rapid brain development and reduced neuromodulator titres correlate with host shifts in .. R Soc Open Sci. 9(9):220962.
Kaushik S, Nair AG, Mutt E, Subramanian HPrasanna, Sowdhamini R.  2016.  Rapid and enhanced remote homology detection by cascading hidden Markov model searches in sequence space.. Bioinformatics. 32(3):338-44.
Nandi SKumar, Mandal R, Bhuyan PJyoti, Dasgupta C, Rao M, Gov NS.  2018.  A random first-order transition theory for an active glass.. Proc Natl Acad Sci U S A. 115(30):7688-7693.
Richhariya S, Hasan G.  2017.  Ral function in muscle is required for flight maintenance in Drosophila.. Small GTPases. :1-6.
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Dhanya SK, Hasan G.  2021.  Purkinje neurons with loss of STIM1 exhibit age-dependent changes in gene expression and synaptic components. J Neurosci..
Richhariya S, Jayakumar S, Abruzzi K, Rosbash M, Hasan G.  2017.  A pupal transcriptomic screen identifies Ral as a target of store-operated calcium entry in Drosophila neurons.. Sci Rep. 7:42586.
Uddin F, Pandit A, Kudpaje A, Notani D, Sabarinathan R.  2026.  Protocol to maximize single-nuclei multiome library complexity for limited primary tissues via optimized sample preparation and library synthesis. STAR Protocols. 7:104640.
Nilofer C, Sukhwal A, Mohanapriya A, Kangueane P.  2017.  Protein-protein interfaces are vdW dominant with selective H-bonds and (or) electrostatics towards broad functional specificity.. Bioinformation. 13(6):164-173.
Broom A, Gosavi S, Meiering EM.  2015.  Protein unfolding rates correlate as strongly as folding rates with native structure.. Protein Sci. 24(4):580-7.
Sandhya S, Mudgal R, Kumar G, Sowdhamini R, Srinivasan N.  2016.  Protein sequence design and its applications.. Curr Opin Struct Biol. 37:71-80.
Ashe S, Malhotra V, Raghu P.  2018.  Protein kinase D regulates metabolism and growth by controlling secretion of insulin like peptide.. Dev Biol. 434(1):175-185.
Neelamraju S, Wales DJ, Gosavi S.  2020.  Protein energy landscape exploration with structure-based models.. Curr Opin Struct Biol. 64:145-151.
Mascarenhas NManuel, Gosavi S.  2016.  Protein Domain-Swapping Can Be a Consequence of Functional Residues.. J Phys Chem B. 120(28):6929-38.
Tripathy M, Srivastava A, Sastry S, Rao M.  2022.  Protein as evolvable functionally constrained amorphous matter.. J Biosci. 47
Ghosh-Harihar M, An R, Athrey R, Borthakur U, Chanchani P, Chetry D, Datta A, Harihar A, Karanth KK, Mariyam D et al..  2019.  Protected areas and biodiversity conservation in India. BIOLOGICAL CONSERVATION. 237:114-124.
Patankar V, Wagh T, Marathe A.  2020.  Protected areas and benthic characteristics influence the distribution of the Vulnerable bumphead parrotfishBolbometopon muricatumin the Andaman and Nicobar Islands, India. ORYX. 54(4):564-571.
Biswas A, Thattai M.  2020.  Promiscuity and specificity of eukaryotic glycosyltransferases.. Biochem Soc Trans.
Jain I, Tran PT.  2023.  Prolongation of mitosis is associated with enhanced endogenous DNA damage in fission yeast.. MicroPubl Biol. 2023
Manjula R, Chockalingam N, Subramanian R, Gosavi S.  2026.  On proline isomerization and 3D-domain-swapping. Biochemical and Biophysical Research Communications. 821:153872.
Parekh A, Das S, Das CK, Mandal M.  2022.  Progressing Towards a Human-Centric Approach in Cancer Research.. Front Oncol. 12:896633.
Kumar R, Dhaka B, Sahoo S, Jolly MKumar, Sabarinathan R.  2023.  Prognostic association of immunoproteasome expression in solid tumours is governed by the immediate immune environment.. Mol Oncol.
Wang Z, Da W, Negi CSingh, Ghimire PLal, Wangdi K, Yadav PK, Pubu Z, Lama L, Yarpel K, Maunsell SC et al..  2022.  Profiling, monitoring and conserving caterpillar fungus in the Himalayan region using anchored hybrid enrichment markers.. Proc Biol Sci. 289(1973):20212650.
Mahita J, Sowdhamini R.  2018.  Probing subtle conformational changes induced by phosphorylation and point mutations in the TIR domains of TLR2 and TLR3.. Proteins.
Ullanat V, Kasukurthi N, Viswanath S.  2022.  PrISM: Precision for Integrative Structural Models. Bioinformatics.
Srivathsa A, Vasudev D, Nair T, Chakrabarti S, Chanchani P, DeFries R, Deomurari A, Dutta S, Ghose D, Goswami VR et al..  2023.  Prioritizing India's landscapes for biodiversity, ecosystem services and human well-being. NATURE SUSTAINABILITY .
Indu M, Meera B, Sivakumar K, Mahadevan C, Shafi K, Nagarathnam B, Sowdhamini R, Sakuntala M.  2022.  ‘Priming’ protects Piper nigrum L. from Phytophthora capsici through reinforcement of phenylpropanoid pathway and possible enhancement of Piperine biosynthesis . Front. Plant Sci.. 13
Venugopal N, Ghosh A, Gala H, Aloysius A, Vyas N, Dhawan J.  2020.  The primary cilium dampens proliferative signaling and represses a G2/M transcriptional network in quiescent myoblasts.. BMC Mol Cell Biol. 21(1):25.
kaushik R, Ladher Rk..  2025.  The primary cilium as a gatekeeper of FGFR2 function.
Das T, Ganguly S, Sengupta S, Rao M.  2015.  Pre-yield non-affine fluctuations and a hidden critical point in strained crystals.. Sci Rep. 5:10644.
Su S, Lim M, Kunte K.  2015.  Prey from the eyes of predators: Color discriminability of aposematic and mimetic butterflies from an avian visual perspective.. Evolution. 69(11):2985-94.
Najeeb N, Jose K, Sreejith K.A, Pulla S, Suresh H.S, Ratnam J, Raghavendra H.V, Chakravarthy D, Chaturvedi RKumar.  2025.  Presence of large trees and tree diversity enhances carbon storage in the Western Ghats. Biological Conservation. 308:111250.
Nasla N'', Karun J'', K.A. S'', Sandeep P'', H.S. S'', . Jayashree R'', H.V. R'', Dayani. C'', Kumar. C''Rajiv.  2025.  Presence of large trees and tree diversity enhances carbon storage in the Western Ghats.. Biological Conservation. 308
Narayanan S, Varma A, Thirumalai V.  2024.  Predictive neural computations in the cerebellum contribute to motor planning and faster behavioral responses in larval zebrafish.. Sci Adv. 10(1):eadi6470.
Macdonald DW, Chiaverini L, Bothwell HM, Kaszta Ż, Ash E, Bolongon G, Can ÖEmre, Campos-Arceiz A, Channa P, Clements GReuben et al..  2020.  Predicting biodiversity richness in rapidly changing landscapes: climate, low human pressure or protection as salvation?
Yang L, Ravikanthachari N, Mariño-Pérez R, Deshmukh R, Wu M, Rosenstein A, Kunte K, Song H, Andolfatto P.  2019.  Predictability in the evolution of Orthopteran cardenolide insensitivity.. Philos Trans R Soc Lond B Biol Sci. 374(1777):20180246.
Parida P, Mukherjee N, Singh A, Lewis S, Sharan K, Mallya S, Singh A, Das SSarathi, Rao M, Higginson DS et al..  2025.  Precise identification of viral-host integration events in HPV-positive cervical cancers by targeted long-read sequencing.. Tumour Virus Res. 20:200325.
Bhatia A, Moza S, Bhalla USingh.  2019.  Precise excitation-inhibition balance controls gain and timing in the hippocampus.. Elife. 8
Sukhwal A, Sowdhamini R.  2015.  PPCheck: A Webserver for the Quantitative Analysis of Protein-Protein Interfaces and Prediction of Residue Hotspots.. Bioinform Biol Insights. 9:141-51.
Banerjee A, Gosavi S.  2023.  Potential Self-Peptide Inhibitors of the SARS-CoV-2 Main Protease.. J Phys Chem B.
Singh P, Macdonald DW.  2017.  Populations and activity patterns of clouded leopards and marbled cats in Dampa Tiger Reserve, India. JOURNAL OF MAMMALOGY. 98(5):1453-1462.
Praveen P, Gopal R, Ramakrishnan U.  2026.  The population structure of invasive \textitLantana camara is shaped by its mating system. eLife. 14:RP104988.
Gopalkrishnan M, Krishna S.  2020.  Pooling Samples to Increase SARS-CoV-2 Testing.. J Indian Inst Sci. :1-6.
Rakshit S., Babji S., Parthiban C., Madhavan R., Adiga V., Sharon EJ, N. Kumar C, Ahmed A., Shivalingaiah S., Shashikumar N. et al..  2023.  Polyfunctional CD4 T-cells correlating with neutralising antibody is a hallmark of COVISHIELDTM and COVAXIN® induced immunity in COVID-19 exposed Indians.. NPJ Vaccines. 8(1):134.
Sultana I, Khandakar N, Das DK, Quader S, Viswanathan A.  2024.  Polychaete worm density correlates with aggregate shorebird density, prey intake rate and foraging success at an intertidal mudflat in Bangladesh. ARDEA. 112(1)
Mukhopadhyay A, Quader S.  2022.  Pollination inaccuracy: estimating male fitness in the movement-assisted dichogamous species Clerodendrum infortunatum. Evolutionary Ecology.
Srinivasan S, Pradhan DKumar, Rai S, Biswakarma A, Srinivasan U.  2025.  Poles Apart: The Structure and Composition of the Bird Community in Bamboo in the Eastern Himalaya.
Johnson MK, Kottur J, Nair DT.  2019.  A polar filter in DNA polymerases prevents ribonucleotide incorporation.. Nucleic Acids Res.
Gopurappilly R.  2021.  Pluripotent Stem Cell Derived Neurons as In Vitro Models for Studying Autosomal Recessive Parkinson's Disease (ARPD): PLA2G6 and Other Gene Loci.. Adv Exp Med Biol.
Nabais C, Pessoa D, de-Carvalho J, van Zanten T, Duarte P, Mayor S, Carneiro J, Telley IA, Bettencourt-Dias M.  2021.  Plk4 triggers autonomous de novo centriole biogenesis and maturation.. J Cell Biol. 220(5)
Chandrasegaran K, Singh A, Laha M, Quader S.  2018.  Playing it safe? Behavioural responses of mosquito larvae encountering a fish predator ETHOLOGY ECOLOGY & EVOLUTION. 30(1):70-87.
Negi H, Ravichandran A, Dasgupta P, Reddy S, Das R.  2024.  Plasticity of the proteasome-targeting signal Fat10 enhances substrate degradation.. Elife. 13
Jain D, Narayanan N, Nair DT.  2016.  Plasticity in Repressor-DNA Interactions Neutralizes Loss of Symmetry in Bipartite Operators.. J Biol Chem. 291(3):1235-42.
Subramani PA, Vartak-Sharma N, Sreekumar S, Mathur P, Nayer B, Dakhore S, Basavanna SK, Kalappa DM, Krishnamurthy RV, Mukhi B et al..  2020.  Plasmodium vivax liver stage assay platforms using Indian clinical isolates.. Malar J. 19(1):214.
R Kumar V, Shivaprasad PV.  2020.  Plant-virus-insect tritrophic interactions: insights into the functions of geminivirus virion-sense strand genes.. Proc Biol Sci. 287(1936):20201846.

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