Protein Structures
Protein Structures
Module 1 (8 classes) : Protein sequences – Amino acids, sequence databases, domain databases, motif databases, sequence searches, dipeptide stereochemistry, secondary structure, supersecondary structures
Module 2 (8 classes): Tertiary structure, protein folds, protein structure prediction, homology modelling, Alphafold modelling, protein interactions with other proteins, protein interactions with ligands, molecular dynamics
Module 3 (8 classes): Protein structures to function, Variety in protein folds, Catalytic sites, Mutations, Allostery, Remote relationships, Multi-domain proteins, Protein Assemblies
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Course Outcomes |
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After completing this course, the student will be able to: |
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CO1 |
have got familiarised with protein sequence searches. |
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CO2 |
be able to read backbone (phi, psi) values, recognise secondary structures and supersecondary structures. |
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CO3 |
be able to recognise and distinguish related protein folds. |
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CO4 |
to appreciate protein structure-function relationships. |